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45 result(s) for "Hayashi, Tomonari"
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Horizontal and vertical distribution and demography of euphausiids in the Ross Sea and its adjacent waters in 2004/2005
The horizontal and vertical distribution and population structure of euphausiids in the Ross Sea and its adjacent waters were investigated during the summers of 2004/2005 using stratified towed samples. Nine species of euphausiids occurred in the survey area. Among them, Euphausia triacantha was dominant in biomass north of the southern boundary of the Antarctic circumpolar current (SB). Thysanoessa spp. was widely distributed north of the continental slope, while E. superba was distributed from the SB to the slope, where it showed the highest biomass. Juvenile E. superba was distributed offshore near the SB and remained at the surface, but gravid females were dominant in the slope and mainly occurred in the middle layers (400–600 m). Adult and juvenile E. crystallorophias were found at 200–300 m in the colder water of the continental shelf. In general, the peak biomass of euphausiids was found in the mid layers of the Ross Sea area. The life span and the number of spawns for major species are also discussed.
Body length-dependent diel vertical migration of Antarctic krill in relation to food availability and predator avoidance in winter at South Georgia
We analyzed diel vertical migration (DVM) of overwintering Antarctic krill at South Georgia, a region that remains ice-free during the austral winter. We considered DVM in relation to krill body length, based on Japanese krill fishery data (1990–2012), and examined DVM in relation to food availability and predator (Antarctic fur seal) avoidance. We report that diel changes in median trawling depth (a proxy for krill vertical distribution) showed significant interannual variation; the overall trend was such that during both daytime and nighttime, the larger the average size of krill, the deeper their median depth. Consistent with the literature, this size-dependent DVM relates to food availability and size-dependent diet; that is, with increasing body length, krill tend to rely less on phytoplankton (which are available in surface layers) as a winter food source. Concerning predator avoidance, and based on analyses using an optimal foraging dive model for fur seals, DVM showed close agreement with size-dependent predation risk; that is, larger krill remained deeper, thereby reducing mortality from fur seals. Therefore, DVM of overwintering krill appears to reflect a compromise between adequate feeding conditions and minimizing predation risk. There was, however, an exception that krill occurred at a shallow depth in winter 2006 when phytoplankton abundance was particularly low and krill density was very high. This supports the hypothesis that physiological demands (i.e. hunger) may become a more important factor affecting DVM than predator avoidance under conditions of insufficient food availability.
Larval development and spawning ecology of euphausiids in the Ross Sea and its adjacent waters in 2004/05
The horizontal and vertical distributions of larvae and reproductive timing of euphausiids were investigated in the Ross Sea and its adjacent waters during austral summer 2004-2005. Occurrences of larvae of Euphausia frigida and E. triacantha were confined to the northern oceanic area where the Upper Circumpolar Deep Water prevailed, although their juvenile and adult stages extended the distribution further southward to the area where cooler Lower Circumpolar Deep Water prevailed. Larvae of Thysanoessa spp. were widely distributed within the oceanic to slope areas but did not occur on the shelf as juvenile or adult stages. Eggs and larvae of E. superba occurred with gravid females along the slope, but no juveniles occurred concurrently. Thus the slope does not appear to be a nursery ground for this species. The distribution of E. crystallorophias larvae was mostly confined to the shelf in the juvenile and adult stages. The onset of deepening was from early and later frucilia stages onward for E. triacantha and E. frigida, respectively. However, Thysanoessa spp. were concentrated increasingly within the surface layers from furcilia I onward. The onset of recruitment to calyptopis I appeared to be earlier in the more northern species with the exception of E. crystallorophias, which recruited before E. superba. The intense spawning of E. crystallorophias and E. superba coincided with a period of development of a coastal polynya. Generally, the onset of spawning of euphausiids appeared to be related to the latitudinal distribution and timing of sea-ice melting. Relationships between surface temperatures and development and recruitment of larvae of euphausiids are discussed.
Provisioning strategies of Antarctic fur seals and chinstrap penguins produce different responses to distribution of common prey and habitat
Central-place foragers that must return to a breeding site to deliver food to offspring are faced with trade-offs between prey patch quality and distance from the colony. Among colonial animals, pinnipeds and seabirds may have different provisioning strategies, due to differences in their ability to travel and store energy. We compared the foraging areas of lactating Antarctic fur seals and chinstrap penguins breeding at Seal Island, Antarctica, to investigate whether they responded differently to the distribution of their prey (Antarctic krill and myctophid fish) and spatial heterogeneity in their habitat. Dense krill concentrations occurred in the shelf region near the colony. However, only brooding penguins, which are expected to be time-minimizers because they must return frequently with whole food for their chicks, foraged mainly in this proximal shelf region. Lactating fur seals and incubating penguins, which can make longer trips to increase energy gain per trip, and so are expected to be energy-maximizers, foraged in the more distant (>20 km from the island) slope and oceanic regions. The shelf region was characterized by more abundant, but lower-energy-content immature krill, whereas the slope and oceanic regions had less abundant but higher-energy-content gravid krill, as well as high-energy-content myctophids. Furthermore, krill in the shelf region undertook diurnal vertical migration, whereas those in the slope and oceanic regions stayed near the surface throughout the day, which may enhance the capture rate for visual predators. Therefore, we suggest that the energy-maximizers foraged in distant, but potentially more profitable feeding regions, while the time-minimizers foraged in closer, but potentially less profitable regions. Thus, time and energy constraints derived from different provisioning strategies may result in sympatric colonial predator species using different foraging areas, and as a result, some central-place foragers use sub-optimal foraging habitats, in terms of the quality or quantity of available prey.
Profiling of pathogenic variants in Japanese patients with sarcoglycanopathy
Background Sarcoglycanopathies (SGPs) are limb-girdle muscular dystrophies (LGMDs) that can be classified into four types, LGMDR3, LGMDR4, LGMDR5, and LGMDR6, caused by mutations in the genes, SGCA , SGCB , SGCG , and SGCD , respectively. SGPs are relatively rare in Japan. This study aims to profile the genetic variants that cause SGPs in Japanese patients. Methods Clinical course and pathological findings were retrospectively reviewed in Japanese patients with SGP. Genetic analyses were performed using a combination of targeted resequencing with a hereditary muscle disease panel, whole genome sequencing, multiplex ligation-dependent probe amplification, and long-read sequencing. The structures of transcripts with aberrant splicing were also determined by RT-PCR, RNA-seq, and in silico prediction. Results We identified biallelic variants in SGC genes in 53 families, including three families with LGMDR6, which had not been identified in Japan so far. SGCA was the most common causative gene, accounting for 56% of cases, followed by SGCG , SGCB , and SGCD , at 17%, 21%, and 6%, respectively. Missense variants in SGCA were very frequent at 78.3%, while they were relatively rare in SGCB , SGCG , and SGCD at 11.1%, 18.2%, and 16.6%, respectively. We also analyzed the haplotypes of alleles carrying three variants found in multiple cases: c.229C > T in SGCA , c.325C > T in SGCB , and exon 6 deletion in SGCG ; two distinct haplotypes were found for c.229C > T in SGCA , while each of the latter two variants was on single haplotypes. Conclusions We present genetic profiles of Japanese patients with SGPs. Haplotype analysis indicated common ancestors of frequent variants. Our findings will support genetic diagnosis and gene therapy.
Effects of a History of Adductor-Related Groin Pain on Kicking Biomechanics and HAGOS Subscales in Male Soccer Players: A Comprehensive Analysis Using 1D-SPM
Adductor-related groin pain (AGP) is a prevalent and frequently recurrent chronic injury among soccer players. This study investigated the impact of AGP history on kicking kinematics, kinetics, and patient-reported outcomes in regional-league soccer players using one-dimensional statistical parametric mapping (1D-SPM). Twenty male athletes were allocated to a group with prior AGP (GP group: n = 8) or without AGP (non-GP group, n = 12), and evaluated during maximal instep and inside-foot kicks using three-dimensional motion analysis and the Copenhagen Hip and Groin Outcome Score (HAGOS). The GP group reported significantly lower HAGOS for pain and quality of life. The 1D-SPM analysis revealed that the GP group employed a compensatory kinetic chain strategy, characterized by impaired trunk–pelvis rotation, increased reliance on the stance leg (SL) for stability, and altered kicking leg (KL) mechanics with reduced hip flexion power. These findings reveal that the underlying deficit in AGP is not isolated muscle weakness but a ‘lack of adaptability in motor control’, resulting in inefficient load distribution and contributing to the high recurrence rates in the adductors and SL. Rehabilitation should adopt a kinetic chain-oriented approach that also addresses stance limb function to mitigate recurrence and optimize performance.
Characterization of highly efficient heavy-ion mutagenesis in Arabidopsis thaliana
Background Heavy-ion mutagenesis is recognised as a powerful technology to generate new mutants, especially in higher plants. Heavy-ion beams show high linear energy transfer (LET) and thus more effectively induce DNA double-strand breaks than other mutagenic techniques. Previously, we determined the most effective heavy-ion LET (LETmax: 30.0 keV micrometer-1) for Arabidopsis mutagenesis by analysing the effect of LET on mutation induction. However, the molecular structure of mutated DNA induced by heavy ions with LETmax remains unclear. Knowledge of the structure of mutated DNA will contribute to the effective exploitation of heavy-ion beam mutagenesis. Results Dry Arabidopsis thaliana seeds were irradiated with carbon (C) ions with LETmax at a dose of 400 Gy and with LET of 22.5 keV μm-1 at doses of 250 Gy or 450 Gy. The effects on mutation frequency and alteration of DNA structure were compared. To characterise the structure of mutated DNA, we screened the well-characterised mutants elongated hypocotyls (hy) and glabrous (gl) and identified mutated DNA among the resulting mutants by high-resolution melting curve, PCR and sequencing analyses. The mutation frequency induced by C ions with LETmax was two-fold higher than that with 22.5 keV μm-1 and similar to the mutation frequency previously induced by ethyl methane sulfonate. We identified the structure of 22 mutated DNAs. Over 80% of the mutations caused by C ions with both LETs were base substitutions or deletions/insertions of less than 100 bp. The other mutations involved large rearrangements. Conclusions The C ions with LETmax showed high mutation efficiency and predominantly induced base substitutions or small deletions/insertions, most of which were null mutations. These small alterations can be determined by single-nucleotide polymorphism (SNP) detection systems. Therefore, C ions with LETmax might be useful as a highly efficient reverse genetic system in conjunction with SNP detection systems, and will be beneficial for forward genetics and plant breeding.
Neuropeptide Y deficiency induces anxiety-like behaviours in zebrafish (Danio rerio)
Neuropeptide Y (NPY) controls energy homeostasis including orexigenic actions in mammalians and non-mammalians. Recently, NPY has attracted attention as a mediator of emotional behaviour and psychosomatic diseases. However, its functions are not fully understood. We established npy gene-deficient (NPY-KO) zebrafish ( Danio rerio ) to assess the relationship between NPY and emotional behaviours. The NPY-KO zebrafish exhibited similar growth, but pomc and avp mRNA levels in the brain were higher as compared to wild-type fish. NPY-KO zebrafish exhibited several anxiety-like behaviours, such as a decrease in social interaction in mirror test and decreased locomotion in black-white test. The acute cold stress-treated NPY-KO zebrafish exhibited anxiety-like behaviours such as remaining stationary and swimming along the side of the tank in the mirror test. Moreover, expression levels of anxiety-associated genes ( orx and cck ) and catecholamine production ( gr , mr , th1 and th2 ) were significantly higher in NPY-KO zebrafish than in wild-type fish. We demonstrated that NPY-KO zebrafish have an anxiety phenotype and a stress-vulnerability like NPY-KO mice, whereby orx and/or catecholamine signalling may be involved in the mechanism actions.
RNA-seq analysis, targeted long-read sequencing and in silico prediction to unravel pathogenic intronic events and complicated splicing abnormalities in dystrophinopathy
Dystrophinopathy is caused by alterations in DMD. Approximately 1% of patients remain genetically undiagnosed, because intronic variations are not detected by standard methods. Here, we combined laboratory and in silico analyses to identify disease-causing genomic variants in genetically undiagnosed patients and determine the regulatory mechanisms underlying abnormal DMD transcript generation. DMD transcripts from 20 genetically undiagnosed dystrophinopathy patients in whom no exon variants were identified, despite dystrophin deficiency on muscle biopsy, were analyzed by transcriptome sequencing. Genome sequencing captured intronic variants and their effects were interpreted using in silico tools. Targeted long-read sequencing was applied in cases with suspected structural genomic abnormalities. Abnormal DMD transcripts were detected in 19 of 20 cases; Exonization of intronic sequences in 15 cases, exon skipping in one case, aberrantly spliced and polyadenylated transcripts in two cases and transcription termination in one case. Intronic single nucleotide variants, chromosomal rearrangements and nucleotide repeat expansion were identified in DMD gene as pathogenic causes of transcript alteration. Our combined analysis approach successfully identified pathogenic events. Detection of diseasing-causing mechanisms in DMD transcripts could inform the therapeutic options for patients with dystrophinopathy.
Modified Left Atrial Closure Technique Using Barbed Sutures in Robotic Cardiac Surgery: A Single‐Center Retrospective Cohort Study
Background: Reducing operative times and standardizing surgical techniques are important in robot‐assisted cardiac surgery. We have implemented V‐Loc barbed sutures as a technical refinement to left atrial closure and report our outcomes. Methods: We retrospectively analyzed 45 consecutive patients who underwent robot‐assisted mitral valve repair between January 2023 and September 2024 at Nagoya University Hospital. Patients were divided into two groups: a V‐Loc group ( n = 29) and a conventional suture group ( n = 16). The primary endpoint was left atrial closure time. Secondary endpoints included perioperative complication and reoperation rates. Results: The V‐Loc group demonstrated a shorter left atrial closure time (11 [7.8–13] minutes vs. 16 [14.5–19] minutes in the conventional group, p < 0.01), representing a 31.3% reduction. One patient in the V‐Loc group required reoperation due to intercostal vessel bleeding, unrelated to the closure technique. No operative mortality or major complications were encountered in either group. During a median follow‐up period of 16 months (up to 27 months), no complications associated with the atrial closure technique were observed. Conclusions: The use of V‐Loc barbed sutures for left atrial closure in robot‐assisted mitral valve surgery significantly reduced operative times while maintaining procedural safety. This technique represents a promising approach for standardizing and streamlining robotic cardiac procedures.