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9 result(s) for "Herrero-Hernández, Eliseo"
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Peptidoglycan-reshuffling proteins SCO0954, SCO1758, SCO4439, and SCO4440 modulate the formation of wall-deficient cells in Streptomyces coelicolor under hyperosmotic sucrose stress
Streptomycetes are biotechnologically valuable bacteria with complex cell division that produce extracellular vesicles (EVs), typically nanometre-sized but can reach 2.5 μm in diameter. Streptomyces also produce dividing wall-deficient L-forms (0.5–7 μm diameter) and, under hyperosmotic stress, non-dividing wall-deficient S-cells (3–4 μm diameter). The boundaries between EVs, L-forms and S-cells are not always clear, as large DNA-containing EVs can resemble small L-forms and S-cells in size. Both EVs and wall-deficient cells offer competitive advantages, such as inter-bacterial signalling, antibiotic transport, resistance and phage defence. However, their formation mechanisms remain poorly understood. We identified sco1758 ( engA GTPase), sco0954 (methionine N-acetyltransferase), sco4439 (D-Ala-D-Ala carboxypeptidase), and sco4440 (GOLPH3-like) as important for wall-deficient cell formation in Streptomyces coelicolor under hyperosmotic sucrose conditions. Mutations in sco4439 and sco4440 increased tetra–tetra(Gly) and tetra(Gly)–penta(Gly) (4–3) peptidoglycan (PG) dimers, while sco1758 affected only the former. Complementation reversed these changes. sco0954 overexpression enhanced PG-associated methionine acetylation and oxidation. Our findings suggest that PG dimerisation and methionine modification may contribute to the formation of wall-deficient cells under hyperosmotic sucrose stress. Further research is required to elucidate how SCO1758, SCO0954 and SCO4439/40 modulate PG architecture and to evaluate their potential to promote EV production for biotechnological applications.
Presence of Pesticides and Transformation Products and Associated Risk Assessment in Groundwater of a Region with an Intensive Agricultural Activity
The protection of natural resources, particularly groundwater, is essential for the sustainability of rural environments, especially when urban centers rely on this water for consumption. The objective of this study was to evaluate the occurrence, seasonal distribution, and associated risk of pesticide residues in groundwater in a region of intensive farming in the Duero river basin (Spain). A total of 40 pesticides and 7 degradation products were analyzed at 20 sampling points over four campaigns conducted in 2018. Overall, twenty-one compounds were detected, including three insecticides, three fungicides, ten herbicides, and five degradation products. Concentrations of eight compounds (one fungicide, five herbicides, and two degradation products) exceeded the limits established by the European Union (EU) for drinking water. Herbicides were the most frequently detected pesticides and were present at the highest concentrations (up to 3.416 μg L−1) across all sampling campaigns. Metolachlor, prosulfocarb, metribuzin, and metolachlor degradation products (ethanesulfonic acid (ESA)– and oxanilic acid (OA)–metolachlor) were detected in concentrations over 1.0 µg L−1. The sum of Toxic Units (∑Tui) showed that none of samples posed a high risk. None of compounds presented a high risk for the three aquatic organismstested; only prosulfocarb for algae and Daphnia magna; pendimethalin for algae and fish; and metribuzin, chlorotoluron, and desethyl-terbuthylazine (DETbz) for algae posed high risks.
Determination of Aminoglycosides by Ion-Pair Liquid Chromatography with UV Detection: Application to Pharmaceutical Formulations and Human Serum Samples
Aminoglycosides (AGs) represent a prominent class of antibiotics widely employed for the treatment of various bacterial infections. Their widespread use has led to the emergence of antibiotic-resistant strains of bacteria, highlighting the need for analytical methods that allow the simple and reliable determination of these drugs in pharmaceutical formulations and biological samples. In this study, a simple, robust and easy-to-use analytical method for the simultaneous determination of five common aminoglycosides was developed with the aim to be widely applicable in routine laboratories. With this purpose, different approaches based on liquid chromatography with direct UV spectrophotometric detection methods were investigated: on the one hand, the use of stationary phases based on hydrophilic interactions (HILIC); on the other hand, the use of reversed-phases in the presence of an ion-pairing reagent (IP-LC). The results obtained by HILIC did not allow for an effective separation of aminoglycosides suitable for subsequent spectrophotometric UV detection. However, the use of IP-LC with a C18 stationary phase and a mobile phase based on tetraborate buffer at pH 9.0 in the presence of octanesulfonate, as an ion-pair reagent, provided adequate separation for all five aminoglycosides while facilitating the use of UV spectrophotometric detection. The method thus developed, IP-LC-UV, was optimized and applied to the quality control of pharmaceutical formulations with two or more aminoglycosides. Furthermore, it is demonstrated here that this methodology is also suitable for more complex matrices, such as serum, which expands its field of application to therapeutic drug monitoring, which is crucial for aminoglycosides, with a therapeutic index ca. 50%.
Effect of Applying an Organic Amendment on the Persistence of Tebuconazole and Fluopyram in Vineyard Soils
The persistence of fluopyram and tebuconazole has been studied in different crops and agricultural soils. However, the behaviour of these fungicides may be altered when they are applied as a combined formulation in organically amended vineyard soils under field conditions. The purpose of this study is to evaluate the effect of applying spent mushroom substrate (SMS) or this residue re-composted with ophite (SMS + OF) on the adsorption, dissipation, and mobility of the fungicides fluopyram and tebuconazole in vineyard soils. Triplicate 10 m2 plots per treatment were set up in two different vineyard soils in the eastern La Rioja region: silt loam (ARN1) and sandy loam (ARN2), respectively, with low organic carbon (OC) content. The organic residues SMS and SMS + OF were applied at doses of 25 and 100 Mg ha−1. The adsorption distribution coefficients (Kd) increased when SMS and SMS + OF were applied, especially at the higher dose (100 Mg ha−1). The dissipation curve of both compounds fitted a two-phase kinetic model, with a very fast initial dissipation rate, followed by slower prolonged dissipation during the second phase. The dissipation half-lives (DT50) ranged between 4.7 and 26.3 days for fluopyram and between 2.3 and 6.3 days for tebuconazole in the different soils, increasing for fluopyram in the ARN1 amended with SMS and SMS + OF. The fungicide residues at 15–30 cm depth were lower in the unamended and amended sandy loam soil (ARN2), indicating that fungicides are dissipated mainly in the topsoil. The results indicate different dissipation mechanisms for both fungicides, as the adsorption by soil OC prevented the dissipation of fluopyram but facilitated the dissipation of tebuconazole, probably due to the formation of non-extractable residues.
Organic Amendment for the Recovery of Vineyard Soils: Effects of a Single Application on Soil Properties over Two Years
Spent mushroom substrate (SMS) is the organic residue generated during mushroom cultivation, and it is being produced in ever-greater quantities around the world. Different applications for this residue have been proposed for its valorization, but its application as a soil amendment could be one of the most sustainable. SMS improves soil quality by increasing its organic matter (OM), thereby enhancing the sustainability of agricultural systems. The objective of this work was to evaluate the effect of the application of two doses of SMS on the chemical, biochemical, and microbiological characteristics of two degraded vineyard soils in La Rioja (Spain) with different textures, as a new regenerative agricultural practice. The variations in organic carbon (OC), micro- and macronutrients, soil microbial biomass (BIO), respiration (RES), dehydrogenase activity (DHA), and the profile of phospholipid fatty acids (PLFAs) extracted from the soils were evaluated over two years. An initial increase in soil OC content was recorded in both soils, although the content that remained over time differed for each site. In general, SMS enhanced DHA, RES, and BIO in the soils, but the effect varied, possibly being conditioned by the availability of OC for soil microorganisms. In general, changes in the soils’ microbial structure after SMS application were not very significant over the two-year experimental period.
Intra-annual trends of fungicide residues in waters from vineyard areas in La Rioja region of northern Spain
The temporal trends of fungicides in surface and ground water in 90 samples, including both surface waters (12) and ground waters (78) from an extensive vineyard area located in La Rioja (Spain), were examined between September 2010 and September 2011. Fungicides are used in increasing amounts on vines in many countries, and they may reach the water resources. However, few data have been published on fungicides in waters, with herbicides being the most frequently monitored compounds. The presence, distribution and year-long evolution of 17 fungicides widely used in the region and a degradation product were evaluated in waters during four sampling campaigns. All the fungicides included in the study were detected at one or more of the points sampled during the four campaigns. Metalaxyl, its metabolite CGA-92370, penconazole and tebuconazole were the fungicides detected in the greatest number of samples, although myclobutanil, CGA-92370 and triadimenol were detected at the highest concentrations. The highest levels of individual fungicides were found in Rioja Alavesa, with concentrations of up to 25.52 μg L −1 , and more than 40 % of the samples recorded a total concentration of >0.5 μg L −1 . More than six fungicides were positively identified in a third of the ground and surface waters in all the sampling campaigns. There were no significant differences between the results obtained in the four sampling campaigns and corroborated a pattern of diffuse contamination from the use of fungicides. The results confirm that natural waters in the study area are extremely vulnerable to contamination by fungicides and highlight the need to implement strategies to prevent and control water contamination by these compounds.
Behavior of Phenols and Phenoxyacids on a Bisphenol-A Imprinted Polymer. Application for Selective Solid-Phase Extraction from Water and Urine Samples
A molecularly imprinted polymer (MIP), obtained by precipitation polymerisation with 4-vinylpyridine as the functional monomer, ethylene glycol dimethacrylate as cross-linker, and bisphenol-A (BPA) as template, was prepared. The binding site configuration of the BPA-MIP was examined using Scatchard analysis. Moreover, the behaviour of the BPA-MIP for the extraction of several phenolic compounds (bisphenol-A, bisphenol-F, 4-nitrophenol, 3-methyl-4-nitrophenol) and phenoxyacid herbicides such as 2,4-D, 2,4,5-T and 2,4,5-TP has been studied in organic and aqueous media in the presence of other pesticides in common use. It was possible to carry out the selective preconcentration of the target analytes from the organic medium with recoveries of higher than 70%. In an aqueous medium, hydrophobic interactions were found to exert a remarkably non-specific contribution to the overall binding process. Several parameters affecting the extraction efficiency of the BPA-MIP were evaluated to achieve the selective preconcentration of phenols and phenoxyacids from aqueous samples. The possibility of using the BPA-MIP as a selective sorbent to preconcentrate these compounds from other samples such as urine and river water was also explored.
Effects of Wood Amendments on the Degradation of Terbuthylazine and on Soil Microbial Community Activity in a Clay Loam Soil
The herbicide terbuthylazine is widely used within the EU; however, its frequent detection in surface and groundwater, together with its intrinsic toxicological properties, may pose a risk both for human and environmental health. Organic amendments have recently been proposed as a possible herbicide sorbent in soil, in order to limit herbicide movement from soil to water. The environmental fate of terbuthylazine depends not only in its mobility but also in its persistence. The latter is directly dependent on microbial degradation. For this reason, the effects of pine and oak residues on terbuthylazine soil microbial community functioning and on the potential of this community for terbuthylazine degradation were studied. For this purpose, degradation kinetics, soil dehydrogenase activity and the number of live bacteria were assessed in a clay loam soil treated with terbuthylazine and either amended with pine or oak wood or unamended (sterilised and non-sterilised). At day 65, 85 % of the herbicide applied still persisted in the sterile soil, 73 % in the pine-amended one and 63 % in the oak-amended and unamended ones. Pine residues increased the sorption of terbuthylazine to soil and hampered microbial degradation owing to its high terbuthylazine sorption capacity and a decrease in the bioavailability of the herbicide. On the contrary, in the presence of oak residues, the herbicide sorption did not increase significantly. The overall results confirm the active role of the soil microbial community in terbuthylazine degradation in amended and unamended soils and in a liquid enrichment culture performed using an aliquot of the same soil as the inoculum. In this clay loam soil, in the absence of amendments, the herbicide was found to be quite persistent ( t 1/2  > 95 days), while in the enrichment culture, the same natural soil bacterial community was able to halve terbuthylazine in 24 days. The high terbuthylazine persistence in this soil was presumably ascribable to its texture and in particular to the mineralogy of the clay fraction.
Long-term variability of metals from fungicides applied in amended young vineyard fields of La Rioja (Spain)
The long-term variability of total Cu content from fungicides applied in a certified wine region of Spain (La Rioja) and of other metals (Cd, Cr, Ni, Pb, and Zn) was evaluated in three young vineyard soils and subsoils unamended and amended with spent mushroom substrates (SMS) over a 3-year period (2006–2008). SMS is a promising agricultural residue as an amendment to increase the soil organic matter content but may modify the behaviour of metals from pesticide utilisation in vineyards. Fresh and composted SMS was applied each year at a rate of 25 t ha−1 (dry-weight). Copper concentrations in the three unamended soils were 21.2–88.5, 25.5–77.1, and 29.4–78.4 mg kg−1. They exceeded natural Cu concentrations of the region and reference sub-lethal hazardous concentration for soil organism. The concentrations of Cd, Ni, Pb, and Zn were largely below the sub-lethal limits. Thus, although Cu levels were lower than those of established vineyards, vine performance, and productivity might be affected. The variation in behaviour between different amendments for each soil was high, so a generic conclusion could not be drawn. The amendment practice seemed to have caused temporarily Cu mobilization respect to untreated soils. Total zinc concentrations fall within the range of the natural soil of La Rioja and were significantly affected (p < 0.05) especially by fresh state SMS addition, with increasing up to 75% respect to untreated specimen. The results indicated a build-up of fresh sites for metal retention at both surface and subsurface level, although no accumulation of metals was observed in the short-term period. However, the benefit for soils and the negative effects need to be monitored in the long run.