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In October 2023, bluetongue virus serotype 3 (BTV-3) emerged in Germany, where Schmallenberg virus is enzootic. We detected BTV-3 in 1 pool of Culicoides biting midges collected at the time ruminant infections were reported. Schmallenberg virus was found in many vector pools. Vector trapping and analysis could elucidate viral spread.

Background Schmallenberg virus (SBV) was first detected in Germany in 2011 and today has an enzootic status in Central Europe. It is transmitted by biting midges of the genus Culicoides , which have a high abundance in livestock farms. In addition to SBV, Culicoides are considered vectors of other viruses relevant to livestock such as bluetongue virus (BTV) and epizootic haemorrhagic disease virus (EHDV). Monitoring of midges and transmitted viruses is of veterinary importance because the resulting diseases may cause animal suffering and entail economic losses due to control measures such as vaccination or trade restrictions. Methods To gain an overview of the prevalence of viruses in Culicoides vectors in Germany, a monitoring programme was established in 2018. From 2019 to 2023, biting midges were caught at 79 sites throughout the country, of which 511,788 were morphologically differentiated according to Culicoides species or subgenus and pooled accordingly. The nucleic acids extracted from 19,521 midge pools of up to 50 individuals were tested in real-time reverse transcription polymerase chain reactions (RT-PCRs) for the genomes of SBV, EHDV and BTV. The species in virus-positive pools were analysed with molecular biological methods to identify potential vector species. Results Whereas no EHDV and BTV were detected, SBV was found in every year of the five monitored years. The minimum infection rate (MIR) of SBV in the tested pools ranged from 3.75 in 2022 to 135.47 in 2023. Most SBV RNA-positive pools were represented by the subgenus Avaritia ( C. obsoletus , C. scoticus , C. dewulfi and C. chiopterus ). To a lesser extent, SBV RNA was detected in pools of the subgenus Culicoides ( C. punctatus , C. pulicaris , C. lupicaris and C. selandicus ). Only one pool of another subgenus, namely C. griseidorsum , was found positive for SBV genome. Conclusions The results from the monitoring programme confirm an enzootic circulation of SBV in the German Culicoides population during summer and autumn with varying infection rates between the years. The lack of detection of BTV in the midges may suggest a circulation of BTV at a low level. The absence of EHDV genome in biting midges is in line with the epidemiological situation in ruminants in Germany. Graphical Abstract

Outside Asia, Seoul virus (SEOV) is an underestimated pathogen. In Germany, autochthonous SEOV-associated hantavirus disease has not been unequivocally diagnosed. We found clinical and molecular evidence for SEOV infection in a young woman; her pet rat was the source of infection.

Antibiotic resistance is increasing worldwide making it necessary to search for alternative antimicrobials. Sodium bituminosulfonate is a long-known substance, whose antimicrobial inhibitory activity has recently been re-evaluated. However, to the best of our knowledge, the bactericidal mode of action of this substance has not been systematically characterized. The aim of this study was to investigate the in vitro bactericidal activity of sodium bituminosulfonate by determining the minimal bactericidal concentrations (MBC), as well as the rapidity of bactericidal effect by time-kill curves. Clinical isolates of methicillin-susceptible (MSSA, n = 20) and methicillin-resistant (mecA/mecC-MRSA, n = 20) Staphylococcus aureus were used to determine MBC by a broth microdilution method. Sodium bituminosulfonate (Ichthyol® light) was tested in double-dilution concentration steps ranging from 0.03 g/L to 256 g/L. For time-kill analysis, two reference and two clinical S. aureus strains were tested with different concentrations of sodium bituminosulfonate (1× minimal inhibitory concentration (MIC), 2× MIC, 4× MIC, 16× MIC and 256× MIC). For MSSA isolates, MBC50, MBC90 and the MBC range were 0.5 g/L, 1.0 g/L and 0.125–1.0 g/L; (MBC/MIC ratio)50, (MBC/MIC ratio)90 and the range of the MBC/MIC ratio were 4, 4 and 1–8, respectively. Among MRSA isolates, MBC50, MBC90 and the MBC range amounted to 0.5 g/L, 1.0 g/L and 0.06–1.0 g/L; (MBC/MIC ratio)50, (MBC/MIC ratio)90 and the range of the MBC/MIC ratio were 2, 4 and 1–8, respectively. Time-kill kinetics revealed a bactericidal effect after 30 min for sodium bituminosulfonate concentrations of 16× MIC and 256× MIC. The bactericidal activity against MSSA and MRSA was demonstrated for sodium bituminosulfonate. The killing was very rapid with the initial population reduced by 99.9% after only short incubation with concentrations of 16× MIC and higher.

In April 2017, a rat was observed on an airplane during a flight from Miami (USA) to Berlin (Germany). After landing in Berlin, significant efforts were made to trap the rat and disinfect the airplane. As rats are known reservoir hosts for a variety of zoonotic pathogens, this event necessitated the establishment of a standard workflow for the detection of rodent-borne pathogens. Tissue and blood samples were collected to screen for zoonotic pathogens and other known and novel infectious agents using an array of open-view methods (cultivation and characterization of bacteria, high-throughput sequencing) and pathogen-specific methods (e.g. PCR, RT-PCR and multiplex serology). The black rat ( Rattus rattus ), as confirmed by mtDNA sequences, carried several infectious agents. Cultivation experiments revealed the presence of seven bacterial and two fungal genera. In addition, a methicillin-susceptible Staphylococcus aureus strain of MLST-CC45 was detected by culture-based approaches, and its full genome was sequenced. High-throughput sequencing identified novel picobirnaviruses and various bacterial genera, the majority of which represent commensals rather than pathogens. Despite the diversity of bacterial, viral, and fungal species that can be expected in wild rats, only a few zoonotic and non-zoonotic pathogens were detected in the stowaway rat. Nonetheless, this incident highlights the potential of international (and cross-continental) dissemination of pathogens and the need for a standardized workflow to provide comprehensive coverage of the diversity of microorganisms in such animals.

Rodents are common reservoirs for numerous zoonotic pathogens, but knowledge about diversity of pathogens in rodents is still limited. Here, we investigated the occurrence and genetic diversity of enteric viruses in 51 Norway rats collected in three different countries in Europe. RNA of at least one virus was detected in the intestine of 49 of 51 animals. Astrovirus RNA was detected in 46 animals, mostly of rat astroviruses. Human astrovirus (HAstV-8) RNA was detected in one, rotavirus group A (RVA) RNA was identified in eleven animals. One RVA RNA could be typed as rat G3 type. Rat hepatitis E virus (HEV) RNA was detected in five animals. Two entire genome sequences of ratHEV were determined. Human norovirus RNA was detected in four animals with the genotypes GI.P4-GI.4, GII.P33-GII.1, and GII.P21. In one animal, a replication competent coxsackievirus A20 strain was detected. Additionally, RNA of an enterovirus species A strain was detected in the same animal, albeit in a different tissue. The results show a high detection rate and diversity of enteric viruses in Norway rats in Europe and indicate their significance as vectors for zoonotic transmission of enteric viruses. The detailed role of Norway rats and transmission pathways of enteric viruses needs to be investigated in further studies.

Seoul orthohantavirus (SEOV) is a rat-associated zoonotic pathogen with an almost worldwide distribution. In 2019, the first autochthonous human case of SEOV-induced hemorrhagic fever with renal syndrome was reported in Germany, and a pet rat was identified as the source of the zoonotic infection. To further investigate the SEOV reservoir, additional rats from the patient and another owner, all of which were purchased from the same vendor, were tested. SEOV RNA and anti-SEOV antibodies were found in both of the patient’s rats and in two of the three rats belonging to the other owner. The complete coding sequences of the small (S), medium (M), and large (L) segments obtained from one rat per owner exhibited a high sequence similarity to SEOV strains of breeder rat or human origin from the Netherlands, France, the USA, and Great Britain. Serological screening of 490 rats from breeding facilities and 563 wild rats from Germany (2007–2020) as well as 594 wild rats from the Netherlands (2013–2021) revealed 1 and 6 seropositive individuals, respectively. However, SEOV RNA was not detected in any of these animals. Increased surveillance of pet, breeder, and wild rats is needed to identify the origin of the SEOV strain in Europe and to develop measures to prevent transmission to the human population.

Rats are a reservoir of human- and livestock-associated methicillin-resistant Staphylococcus aureus (MRSA). However, the composition of the natural S. aureus population in wild and laboratory rats is largely unknown. Here, 144 nasal S. aureus isolates from free-living wild rats, captive wild rats and laboratory rats were genotyped and profiled for antibiotic resistances and human-specific virulence genes. The nasal S. aureus carriage rate was higher among wild rats (23.4%) than laboratory rats (12.3%). Free-living wild rats were primarily colonized with isolates of clonal complex (CC) 49 and CC130 and maintained these strains even in husbandry. Moreover, upon livestock contact, CC398 isolates were acquired. In contrast, laboratory rats were colonized with many different S. aureus lineages—many of which are commonly found in humans. Five captive wild rats were colonized with CC398-MRSA. Moreover, a single CC30-MRSA and two CC130-MRSA were detected in free-living or captive wild rats. Rat-derived S. aureus isolates rarely harbored the phage-carried immune evasion gene cluster or superantigen genes, suggesting long-term adaptation to their host. Taken together, our study revealed a natural S. aureus population in wild rats, as well as a colonization pressure on wild and laboratory rats by exposure to livestock- and human-associated S. aureus, respectively.

Since 1814, when rubella was first described, the origins of the disease and its causative agent, rubella virus ( Matonaviridae : Rubivirus ), have remained unclear 1 . Here we describe ruhugu virus and rustrela virus in Africa and Europe, respectively, which are, to our knowledge, the first known relatives of rubella virus. Ruhugu virus, which is the closest relative of rubella virus, was found in apparently healthy cyclops leaf-nosed bats ( Hipposideros cyclops ) in Uganda. Rustrela virus, which is an outgroup to the clade that comprises rubella and ruhugu viruses, was found in acutely encephalitic placental and marsupial animals at a zoo in Germany and in wild yellow-necked field mice ( Apodemus flavicollis ) at and near the zoo. Ruhugu and rustrela viruses share an identical genomic architecture with rubella virus 2 , 3 . The amino acid sequences of four putative B cell epitopes in the fusion (E1) protein of the rubella, ruhugu and rustrela viruses and two putative T cell epitopes in the capsid protein of the rubella and ruhugu viruses are moderately to highly conserved 4 – 6 . Modelling of E1 homotrimers in the post-fusion state predicts that ruhugu and rubella viruses have a similar capacity for fusion with the host-cell membrane 5 . Together, these findings show that some members of the family Matonaviridae can cross substantial barriers between host species and that rubella virus probably has a zoonotic origin. Our findings raise concerns about future zoonotic transmission of rubella-like viruses, but will facilitate comparative studies and animal models of rubella and congenital rubella syndrome. Ruhugu virus and rustrela virus are the first close relatives of rubella virus, providing insights into the zoonotic origin of rubella virus and the epidemiology and evolution of all three viruses.