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result(s) for
"Hoischen, C"
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Acceptor-photobleaching FRET analysis of core kinetochore and NAC proteins in living human cells
by
Diekmann, Stephan
,
Ulbricht, T
,
Hoischen, C
in
Bacterial Proteins - genetics
,
Biochemistry
,
Biological and Medical Physics
2009
Faithful chromatin segregation is mediated and controlled by the kinetochore protein network which assembles at centromeres. In this study, the neighbourhood relations of inner kinetochore and nucleosome-associated complex (NAC) proteins were analysed in living human interphase cells by acceptor photobleaching FRET. The data indicate that CENP-U is in close vicinity to CENP-I as well as to CENP-B and that CENP-M is close to CENP-T.
Journal Article
Expression of genes of lipid synthesis and altered lipid composition modulates L-glutamate efflux of Corynebacterium glutamicum
2002
L-Glutamate is made with Corynebacterium glutamicum on a scale of more than 10(6) tons/year. Nevertheless, formation of this amino acid is enigmatic and there is very limited molecular information available to unravel the apparently complex conditions leading to L-glutamate efflux. Here, we report the isolation and overexpression of the genes involved in lipid synthesis: acp, fadD15, cma, cls, pgsA2, cdsA, gpsA, and plsC, and the inactivation of cma and cls. In addition, the consequences for phospholipid content, temperature sensitivity, as well as detergent-independent and detergent-dependent L-glutamate efflux were quantified. An in part strong alteration of the phospholipid composition was achieved; for instance, overexpression of fadD15 encoding an acylCoA ligase resulted in an increase of phosphatidyl inositol from 12.6 to 30.2%. All strains, except that overexpressing acp (acyl carrier protein), exhibited increased temperature sensitivity, with the strongest sensitivity present upon cls (cardiolipin synthetase) inactivation. As a consequence of the genetically modified lipid synthesis, L-glutamate efflux changed quite dramatically; for instance, overexpression of plsC (acylglycerolacyl transferase) resulted in a detergent-triggered increase of L-glutamate accumulation from 92 mM to 108 mM, whereas acp overexpression reduced the accumulation to 24 mM. With some of the overexpressed genes, substantial L-glutamate excretion even without detergent addition was obtained when the fermentation temperature was elevated. These data show that the chemical and physical properties of the cytoplasmic membrane are altered and suggest that this is a necessary precondition to achieve L-glutamate efflux.
Journal Article
Expression and secretion of functional miniantibodies McPC603scFvDhlx in cell-wall-less L-form strains of Proteus mirabilis and Escherichia coli : A comparison of the synthesis capacities of L-form strains with an E. coli producer strain
by
Riesenberg, D.
,
Kujau, M. J.
,
Hoischen, C.
in
Antibodies
,
Antibody Formation
,
Antibody Specificity
1998
The paper describes the synthesis of the phosphorylcholine-binding miniantibody McPC603scFvDhl x in cell-wall-less L-form strains of Escherichia coli and Proteus mirabilis. Cells of these strains were transformed with the plasmid pACK02scKan, carrying the miniantibody (miniAb) coding sequence under the control of the lac promoter. L-form transformants of both species were able to synthesize the functional miniAb as an extracellular soluble product. The highest quantities were obtained by P. mirabilis L-form strains after induction with 5 mM isopropyl beta-D-thiogalactopyranoside (IPTG). Yields of 45-75 mg/l total antibody protein and of 10-18 mg/l functional miniAb were estimated in the growth medium of shaking cultures 40-80 h after induction with IPTG. About 10% of the active miniAb remained cell-bound. The yields of functional miniAb could be optimized by lowering the growth temperature from 37 degrees C to 26-32 degrees C and by supplementation of the medium with 80 mM sodium fumarate. A comparison of the specific activities revealed that the P. mirabilis L-form strains have a similar synthesis capacity (2-4 mg functional miniAb/g cell dry weight) to that of the producer strain E. coli RV308. The results show that the processes of correct folding and assembling of the miniAb molecules are possible without the periplasmic compartment.
Journal Article
The analysis of cell division and cell wall synthesis genes reveals mutationally inactivated ftsQ and mraY in a protoplast-type L-form of Escherichia coli
by
Diekmann, Stephan
,
Gumpert, Johannes
,
Grosse, Frank
in
Amino Acid Sequence
,
Amino acids
,
Bacteria
2006
Abstract
Cell division and cell wall synthesis are tightly linked cellular processes for bacterial growth. A protoplast-type L-form Escherichia coli, strain LW1655F+, indicated that bacteria can divide without assembling a cell wall. However, the molecular basis of its phenotype remained unknown. To establish a first phenotype–genotype correlation, we analyzed its dcw locus, and other genes involved in division of E. coli. The analysis revealed defective ftsQ and mraY genes, truncated by a nonsense and a frame-shift mutation, respectively. Missense mutations were determined in the ftsA and ftsW products yielding amino-acid replacements at conserved positions. FtsQ and MraY, obviously nonfunctional in the L-form, are essential for cell division and cell wall synthesis, respectively, in all bacteria with a peptidoglycan-based cell wall. LW1655F+ is able to survive their loss-of-functions. This points to compensatory mechanisms for cell division in the absence of murein sacculus formation. Hence, this L-form represents an interesting model to investigate the plasticity of cell division in E. coli, and to demonstrate how concepts fundamental for bacterial life can be bypassed.
Journal Article
Expression of the carboxypeptidase T gene from Thermoactinomyces vulgaris in stable protoplast type L-forms of Proteus mirabilis
1998
The structural gene of the carboxypeptidase T (
cpt) was successfully expressed in cell wall-less L-form cells of
Proteus mirabilis. The DNA sequence encoding the PhoA leader peptide was fused with a truncated
cpt gene encoding the mature enzyme. The modified gene in a pUC-based kanamycin resistance vector under the control of the
lac promoter was transformed into L-form cells of
P. mirabilis. They were able to produce the recombinant CpT both as a secretory and as a cell-bound insoluble form. The co-secretory processing of the PhoA leader peptide was quite efficient. The yield of the secreted CpT was not less than 20 mg l
−1 and should be improvable.
Journal Article
The H.E.S.S. transients follow-up system
2022
Observations of astrophysical transients have brought many novel discoveries and provided new insights into physical processes at work under extreme conditions in the Universe. Multi-wavelength and multi-messenger observations of variable objects require dedicated procedures and follow-up systems capable of digesting and reacting to external alerts to execute coordinated follow-up campaigns. The main functions of such follow-up systems are the processing, filtering, and ranking of the incoming alerts, the fully automated rapid execution of the observations according to an observation strategy tailored to the instrument, and real-time data analysis with feedback to the operators and other instruments. H.E.S.S. has been searching for transient phenomena since its inauguration in 2003. In this paper, we describe the transients follow-up system of H.E.S.S. which became operational in 2016. The system allows H.E.S.S. to conduct a more versatile, optimised, and largely autonomous transient follow-up program, combining all major functionalities in one systematic approach. We describe the design, central functionalities, and interfaces of the follow-up system in general and its three main components in detail: the Target of Opportunity (ToO) alert system, the data acquisition and central control system, and the real-time analysis. We highlight architectural decisions and features that enable fully automatic ToO follow-up and indicate key performance metrics of the sub-systems. We discuss the system's capabilities and highlight the need for a fine-tuned interplay of the different sub-systems in order to react quickly and reliably. Lessons learned from the development, integration, and operation of the follow-up system are reviewed in light of new and large science infrastructures and associated challenges in this exciting new era of inter-operable astronomy.
The Science Alert Generation system of the Cherenkov Telescope Array Observatory
2021
The Cherenkov Telescope Array (CTA) Observatory, with dozens of telescopes located in both the Northern and Southern Hemispheres, will be the largest ground-based gamma-ray observatory and will provide broad energy coverage from 20 GeV to 300 TeV. The large effective area and field-of-view, coupled with the fast slewing capability and unprecedented sensitivity, make CTA a crucial instrument for the future of ground-based gamma-ray astronomy. To maximise the scientific return, the array will send alerts on transients and variable phenomena (e.g. gamma-ray burst, active galactic nuclei, gamma-ray binaries, serendipitous sources). Rapid and effective communication to the community requires a reliable and automated system to detect and issue candidate science alerts. This automation will be accomplished by the Science Alert Generation (SAG) pipeline, a key system of the CTA Observatory. SAG is part of the Array Control and Data Acquisition (ACADA) working group. The SAG working group develops the pipelines to perform data reconstruction, data quality monitoring, science monitoring and real-time alert issuing during observations to the Transients Handler functionality of ACADA. SAG is the system that performs the first real-time scientific analysis after the data acquisition. The system performs analysis on multiple time scales (from seconds to hours). \\abrb{SAG must issue candidate science alerts within} 20 seconds from the data taking and with sensitivity at least half of the CTA nominal sensitivity. These challenging requirements must be fulfilled by managing trigger rates of tens of kHz from the arrays. Dedicated and highly optimised software and hardware architecture must thus be designed and tested. In this work, we present the general architecture of the ACADA-SAG system.
Introduction of a mini-gene encoding a five-amino acid peptide confers erythromycin resistance on Bacillus subtilis and provides temporary erythromycin protection in Proteus mirabilis
by
Novikova, Svetlana I.
,
Gumpert, Johannes
,
Serkina, Anna V.
in
Antibiotic resistance
,
Bacillus licheniformis
,
Bacillus subtilis
2000
A 15-bp mini-gene was introduced into
Bacillus subtilis and into stable protoplast-like L-forms of
Proteus mirabilis. This mini-gene encoded the peptide MVLFV and modeled a fragment of
Escherichia coli 23S rRNA responsible for
E. coli erythromycin (Ery) resistance. Expression of the introduced mini-gene conferred permanent Ery resistance on
B. subtilis. In L-forms of
P. mirabilis, the Ery-protective effect was maintained in the course of several generations. Herewith, the mechanism of Ery resistance mediated by expression of specific short peptides was shown to exist in evolutionary distant bacteria. Three new plasmids were constructed containing the gene under study transcriptionally fused with the genes encoding glutamylendopeptidase of
Bacillus licheniformis or δ-endotoxin of
Bacillus thuringiensis. The Ery resistance pentapeptide (E-peptide) mini-gene served as an efficient direct transcriptional reporter and allowed to select bacillar glutamylendopeptidase with improved productivity. The mini-genes encoding E-peptides may be applied as selective markers to transform both Gram-positive and Gram-negative bacteria. The small size of the E-peptide mini-genes makes them attractive selective markers for vector construction.
Journal Article
H.E.S.S. observations following multi-messenger alerts in real-time
2017
The H.E.S.S. Imaging Air Cherenkov Telescope system is, due to its fast reaction time and its comparably low energy threshold, very well suited to perform follow-up observations of detections at other wavelengths or other messengers like high-energy neutrinos and gravitational waves. These advantages are utilized optimally via a fully automatized system reacting to alerts from various partner observatories covering various wavelengths and astrophysical messengers. In this contribution we'll provide an overview and present recent results from H.E.S.S. programs to follow up on multi-wavelength and multi-messenger alerts. To illustrate the capabilities of the system we present several real-time ToO observations searching for high-energy gamma-ray emission in coincidence with high-energy neutrinos detected by the IceCube and ANTARES neutrino telescopes and outline our program to search for gravitational wave counterparts.
Introduction of a mini-gene encoding a five-amino acid peptide confers erythromycin resistance on Bacillus subtilis and provides temporary erythromycin protection in Proteus mirabilis
by
Novikova, Svetlana I.
,
Gumpert, Johannes
,
Serkina, Anna V.
in
Acid resistance
,
Amino Acid Sequence
,
Amino acids
2000
Abstract
A 15-bp mini-gene was introduced into Bacillus subtilis and into stable protoplast-like L-forms of Proteus mirabilis. This mini-gene encoded the peptide MVLFV and modeled a fragment of Escherichia coli 23S rRNA responsible for E. coli erythromycin (Ery) resistance. Expression of the introduced mini-gene conferred permanent Ery resistance on B. subtilis. In L-forms of P. mirabilis, the Ery-protective effect was maintained in the course of several generations. Herewith, the mechanism of Ery resistance mediated by expression of specific short peptides was shown to exist in evolutionary distant bacteria. Three new plasmids were constructed containing the gene under study transcriptionally fused with the genes encoding glutamylendopeptidase of Bacillus licheniformis or δ-endotoxin of Bacillus thuringiensis. The Ery resistance pentapeptide (E-peptide) mini-gene served as an efficient direct transcriptional reporter and allowed to select bacillar glutamylendopeptidase with improved productivity. The mini-genes encoding E-peptides may be applied as selective markers to transform both Gram-positive and Gram-negative bacteria. The small size of the E-peptide mini-genes makes them attractive selective markers for vector construction.
Journal Article