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635 result(s) for "Huang, Chien‐Yu"
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Coordinated Epigenetic Regulation in Plants: A Potent Managerial Tool to Conquer Biotic Stress
Plants have evolved variable phenotypic plasticity to counteract different pathogens and pests during immobile life. Microbial infection invokes multiple layers of host immune responses, and plant gene expression is swiftly and precisely reprogramed at both the transcriptional level and post-transcriptional level. Recently, the importance of epigenetic regulation in response to biotic stresses has been recognized. Changes in DNA methylation, histone modification, and chromatin structures have been observed after microbial infection. In addition, epigenetic modifications may be preserved as transgenerational memories to allow the progeny to better adapt to similar environments. Epigenetic regulation involves various regulatory components, including non-coding small RNAs, DNA methylation, histone modification, and chromatin remodelers. The crosstalk between these components allows precise fine-tuning of gene expression, giving plants the capability to fight infections and tolerant drastic environmental changes in nature. Fully unraveling epigenetic regulatory mechanisms could aid in the development of more efficient and eco-friendly strategies for crop protection in agricultural systems. In this review, we discuss the recent advances on the roles of epigenetic regulation in plant biotic stress responses.
On the prevalence of elliptic and genus one fibrations among toric hypersurface Calabi-Yau threefolds
A bstract We systematically analyze the fibration structure of toric hypersurface Calabi-Yau threefolds with large and small Hodge numbers. We show that there are only four such Calabi-Yau threefolds with h 1,1 ≥ 140 or h 2,1 ≥ 140 that do not have manifest elliptic or genus one fibers arising from a fibration of the associated 4D polytope. There is a genus one fibration whenever either Hodge number is 150 or greater, and an elliptic fibration when either Hodge number is 228 or greater. We find that for small h 1,1 the fraction of polytopes in the KS database that do not have a genus one or elliptic fibration drops exponentially as h 1,1 increases. We also consider the different toric fiber types that arise in the polytopes of elliptic Calabi-Yau threefolds.
Comparing elliptic and toric hypersurface Calabi-Yau threefolds at large Hodge numbers
A bstract We compare the sets of Calabi-Yau threefolds with large Hodge numbers that are constructed using toric hypersurface methods with those can be constructed as elliptic fibrations using Weierstrass model techniques motivated by F-theory. There is a close correspondence between the structure of “tops” in the toric polytope construction and Tate form tunings of Weierstrass models for elliptic fibrations. We find that all of the Hodge number pairs ( h 1,1 , h 2,1 ) with h 1,1 or h 2,1 ≥ 240 that are associated with threefolds in the Kreuzer-Skarke database can be realized explicitly by generic or tuned Weierstrass/Tate models for elliptic fibrations over complex base surfaces. This includes a relatively small number of somewhat exotic constructions, including elliptic fibrations over non-toric bases, models with new Tate tunings that can give rise to exotic matter in the 6D F-theory picture, tunings of gauge groups over non-toric curves, tunings with very large Hodge number shifts and associated nonabelian gauge groups, and tuned Mordell-Weil sections associated with U(1) factors in the corresponding 6D theory.
Fibration structure in toric hypersurface Calabi-Yau threefolds
A bstract We find through a systematic analysis that all but 29,223 of the 473.8 million 4D reflexive polytopes found by Kreuzer and Skarke have a 2D reflexive subpolytope. Such a subpolytope is generally associated with the presence of an elliptic or genus one fibration in the corresponding birational equivalence class of Calabi-Yau threefolds. This extends the growing body of evidence that most Calabi-Yau threefolds have an elliptically fibered phase.
RNA-binding proteins contribute to small RNA loading in plant extracellular vesicles
Plants use extracellular vesicles (EVs) to transport small RNAs (sRNAs) into their fungal pathogens and silence fungal virulence-related genes through a phenomenon called ‘cross-kingdom RNAi’. It remains unknown, however, how sRNAs are selectively loaded into EVs. Here, we identified several RNA-binding proteins in Arabidopsis , including Argonaute 1 (AGO1), RNA helicases (RHs) and annexins (ANNs), which are secreted by exosome-like EVs. AGO1, RH11 and RH37 selectively bind to EV-enriched sRNAs but not to non-EV-associated sRNAs, suggesting that they contribute to the selective loading of sRNAs into EVs. Conversely, ANN1 and ANN2 bind to sRNAs non-specifically. The ago1, rh11   rh37 and ann1   ann2 mutants showed reduced secretion of sRNAs in EVs, demonstrating that these RNA-binding proteins play an important role in sRNA loading and/or stabilization in EVs. Furthermore, rh11   rh37 and ann1   ann2 showed increased susceptibility to Botrytis cinerea , suggesting that RH11, RH37, ANN1 and ANN2 positively regulate plant immunity against B. cinerea . Plants use extracellular vesicles to deliver small RNAs that could silence fungal virulence genes to their fungal pathogens. In this study, the authors profile the components of these extracellular vesicles and investigate regulators contributing to the specific RNA loading and stabilization.
Mirror symmetry and elliptic Calabi-Yau manifolds
A bstract We find that for many Calabi-Yau threefolds with elliptic or genus one fibrations mirror symmetry factorizes between the fiber and the base of the fibration. In the simplest examples, the generic CY elliptic fibration over any toric base surface B that supports an elliptic Calabi-Yau threefold has a mirror that is an elliptic fibration over a dual toric base surface B ˜ that is related through toric geometry to the line bundle −6 K B . The Kreuzer-Skarke database includes all these examples and gives a wide range of other more complicated constructions where mirror symmetry also factorizes. Since recent evidence suggests that most Calabi-Yau threefolds are elliptic or genus one fibered, this points to a new way of understanding mirror symmetry that may apply to a large fraction of smooth Calabi-Yau threefolds. The factorization structure identified here can also apply for CalabiYau manifolds of higher dimension.
Borophene Embedded Cellulose Paper for Enhanced Photothermal Water Evaporation and Prompt Bacterial Killing
Solar‐driven photothermal water evaporation is considered an elegant and sustainable technology for freshwater production. The existing systems, however, often suffer from poor stability and biofouling issues, which severely hamper their prospects in practical applications. Conventionally, photothermal materials are deposited on the membrane supports via vacuum‐assisted filtration or dip‐coating methods. Nevertheless, the weak inherent material‐membrane interactions frequently lead to poor durability, and the photothermal material layer can be easily peeled off from the hosting substrates or partially dissolved when immersed in water. In the present article, the discovery of the incorporation of borophene into cellulose nanofibers (CNF), enabling excellent environmental stability with a high light‐to‐heat conversion efficiency of 91.5% and water evaporation rate of 1.45 kg m−2 h−1 under simulated sunlight is reported. It is also demonstrated that borophene papers can be employed as an excellent active photothermal material for eliminating almost 100% of both gram‐positive and gram‐negative bacteria within 20 min under three sun irradiations. The result opens a new direction for the design of borophene‐based papers with unique photothermal properties which can be used for the effective treatment of a wide range of wastewaters. A novel borophene‐embedded cellulose paper is fabricated by incorporating two‐dimensional borophene nanosheets inside the cellulose fiber structure. The borophene paper exhibits outstanding absorption properties, featuring excellent stability and mechanical properties for photothermal water evaporation and bacterial killing applications.
Inorganic Halide Perovskite Quantum Dots: A Versatile Nanomaterial Platform for Electronic Applications
HighlightsResearch progress on inorganic perovskites quantum dots is reviewed from three aspects: physical properties, synthesis approaches, and electronic applications.Inorganic perovskite quantum dots have been exploited as either the active layers or the additives in high-performance transistors and memories.Challenges and outlook on future advancement of perovskites quantum dots-based electronics are elaborated.Metal halide perovskites have generated significant attention in recent years because of their extraordinary physical properties and photovoltaic performance. Among these, inorganic perovskite quantum dots (QDs) stand out for their prominent merits, such as quantum confinement effects, high photoluminescence quantum yield, and defect-tolerant structures. Additionally, ligand engineering and an all-inorganic composition lead to a robust platform for ambient-stable QD devices. This review presents the state-of-the-art research progress on inorganic perovskite QDs, emphasizing their electronic applications. In detail, the physical properties of inorganic perovskite QDs will be introduced first, followed by a discussion of synthesis methods and growth control. Afterwards, the emerging applications of inorganic perovskite QDs in electronics, including transistors and memories, will be presented. Finally, this review will provide an outlook on potential strategies for advancing inorganic perovskite QD technologies.
Methyl gallate, gallic acid-derived compound, inhibit cell proliferation through increasing ROS production and apoptosis in hepatocellular carcinoma cells
Hepatocellular carcinoma (HCC) is a global health problem. Currently, there is no effective therapeutic strategy for HCC. Methyl gallate (MG), from plant-derived phenolic gallic acid, has exhibited antitumor efficacy. However, the effect of MG on HCC is unclear. In vitro growth activity was detected by a sulforhodamine assay. A zebrafish xenotransplantation was applied to evaluate the inhibitory effect of MG. Reactive oxygen species (ROS) production, autophagy, and lysosome formation were detected by specific dyes. Finally, apoptosis was examined using annexin V-FITC/PI staining and western blot was performed to determine the molecular mechanism. It was demonstrated that MG treatment inhibited the proliferation of Hep3B, Mahlavu, and HepJ5 cells. Xenotransplantation also showed that MG inhibited the growth of Hep3B and HepJ5 cells. MG treatment increased cellular levels of superoxide and oxidative stress. Increases in autophagy and lysosome formation were found after MG treatment. The western blot analysis showed that MG activated cleavage of caspase-3 and poly (SDP ribose) polymerase (PARP), modulated levels of the Bcl2, Bax, and Bad ligands, and induced apoptosis. MG induced autophagy with notable activation of beclin-1, autophagy related 5+12 (ATG5+12), and conversion of light chain 3-I (LC3-I) to II. Our study showed that MG exposure inhibited HCC proliferation both in vitro and in vivo. And blocking autophagy enhanced MG-induced cytotoxicity in HCC cells. These findings suggested MG might serve as a powerful therapeutic supplement for human HCC patients.
Propyl gallate inhibits hepatocellular carcinoma cell growth through the induction of ROS and the activation of autophagy
The poor prognosis of hepatocellular carcinoma (HCC) has been attributed to a high frequency of tumor metastasis and recurrence even after successful surgical resection. With less than 30% of patients benefiting from curative treatment, alternative treatment regimens for patients with advanced HCC are needed. Propyl gallate (PG), a synthetic antioxidant used in preserving food and medicinal preparations, has been shown to induce cancer cell death, but the anticancer effects of PG in HCC are unclear. In the present study, we demonstrated that PG inhibited HCC cell proliferation in vitro and in zebrafish models in vivo in a dose- and time-dependent manner. PG also induced cell apoptosis and increased the number of necrotic cells in a time- and dose-dependent manner as determined using a high-content analysis system. We found that PG also increased the intracellular levels of superoxide and reactive oxidative stress as well as the formation of autophagosomes and lysosomes. Regarding the molecular mechanism, PG did not alter the levels of autophagy-related 5 (ATG5), ATG5/12 or Beclin-1 but increased the rate of the LC3-I to LC3-II conversion, suggesting autophagy induction. PG exposure increased the levels of the pro-apoptotic proteins cleaved caspase-3, cleaved PARP, Bax, and Bad and a decreased level of the anti-apoptotic protein Bcl-2. In conclusion, we demonstrate that PG inhibits HCC cell proliferation through enhanced ROS production and autophagy activation. Finally, PG-treated cells induced cell apoptosis and may be a new candidate for HCC therapy.