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"Huo, Yanan"
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The ChinaMAP analytics of deep whole genome sequences in 10,588 individuals
2020
Metabolic diseases are the most common and rapidly growing health issues worldwide. The massive population-based human genetics is crucial for the precise prevention and intervention of metabolic disorders. The China Metabolic Analytics Project (ChinaMAP) is based on cohort studies across diverse regions and ethnic groups with metabolic phenotypic data in China. Here, we describe the centralized analysis of the deep whole genome sequencing data and the genetic bases of metabolic traits in 10,588 individuals from the ChinaMAP. The frequency spectrum of variants, population structure, pathogenic variants and novel genomic characteristics were analyzed. The individual genetic evaluations of Mendelian diseases, nutrition and drug metabolism, and traits of blood glucose and BMI were integrated. Our study establishes a large-scale and deep resource for the genetics of East Asians and provides opportunities for novel genetic discoveries of metabolic characteristics and disorders.
Journal Article
The impact of boarding schools on the development of cognitive and non-cognitive abilities in adolescents
by
Zhang, Songyan
,
Zeng, Hang
,
Chang, Fang
in
Academic achievement
,
Achievement tests
,
Adolescence
2023
Background
Since China adopted a policy to eliminate rural learning centers, boarding has become an important feature of the current rural student community. However, there is a lack of consensus on the impact of boarding schools on students' cognitive and non-cognitive development. This study investigates the effect of boarding schools on the development of cognitive and non-cognitive abilities of junior high school students in rural northwest China.
Methods
Using a sample of 5,660 seventh-grade students from 160 rural junior high schools across 19 counties, we identify a causal relationship between boarding and student abilities with the instrumental variables (IV) approach.
Results
The results suggest that boarding positively influences memory and attention, while it has no significant effect on other cognitive abilities such as reasoning, transcription speed, and accuracy. Furthermore, we find no significant association between boarding and the development of non-cognitive skills.
Conclusions
Given the widespread prevalence of boarding schools in rural regions, our study highlights the growing importance of improving school management to promote the development of students’ cognitive abilities and integrating the development of non-cognitive or social-emotional abilities into students’ daily routines.
Journal Article
A systematic review and meta-analysis on the effectiveness of bivalent mRNA booster vaccines against Omicron variants
2024
A global shift to bivalent mRNA vaccines is ongoing to counterbalance the diminishing effectiveness of the original monovalent vaccines due to the evolution of SARS-CoV-2 variants, yet substantial variation in the bivalent vaccine effectiveness (VE) exists across studies and a complete picture is lacking.
We searched papers evaluating absolute or relative effectiveness of SARS-CoV-2 BA.1 type or BA.4/5 type bivalent mRNA vaccines on eight publication databases published from September 1st, 2022, to November 8th, 2023. Pooled VE against Omicron-associated infection and severe events (hospitalization and/or death) was estimated in reference to unvaccinated, ≥2 original monovalent doses, and ≥ 3 original monovalent doses.
From 630 citations identified, 28 studies were included, involving 55,393,303 individuals. Bivalent boosters demonstrated higher effectiveness against symptomatic or any infection for all ages combined, with an absolute VE of 53.5 % (95 % CI: –22.2–82.3 %) when compared to unvaccinated and relative VE of 30.8 % (95 % CI: 22.5–38.2 %) and 28.4 % (95 % CI: 10.2–42.9 %) when compared to ≥ 2 and ≥ 3 original monovalent doses, respectively. The corresponding VE estimates for adults ≥ 60 years old were 22.5 % (95 % CI: 16.8–39.8 %), 31.4 % (95 % CI: 27.7–35.0 %), and 30.6 % (95 % CI: −13.2–57.5 %). Pooled bivalent VE estimates against severe events were higher, 72.9 % (95 % CI: 60.5–82.4 %), 57.6 % (95 % CI: 42.4–68.8 %), and 62.1 % (95 % CI: 54.6–68.3 %) for all ages, and 72.0 % (95 % CI: 51.4–83.9 %), 63.4 % (95 % CI: 41.0–77.3 %), and 60.7 % (95 % CI: 52.4–67.6 %) for adults ≥ 60 years old, compared to unvaccinated, ≥2 original monovalent doses, and ≥ 3 original monovalent doses, respectively.
The bivalent boosters demonstrated superior protection against severe outcomes than the original monovalent boosters across age groups, highlighting the critical need for improving vaccine coverage, especially among the vulnerable older subpopulation.
Journal Article
Novel treatment of chalazion using light-guided-tip intense pulsed light
2023
We assessed the effectiveness of light-guided-tip intense pulsed light (IPL) with meibomian gland expression (MGX) in chalazion treatment. Ninety-five eyes with chalazion received a light-guided-tip IPL-MGX treatment (IPL-MGX group), and another 95 eyes with chalazion received incision with curettage treatment (Control group). Prior to IPL or incision, as well as 1 month after the final treatment, data were gathered pertaining to the lesion location and size, hyperemia, lesions regression or recurrence, and a comprehensive ophthalmic examination. The total size of the chalazia in the IPL-MGX group was significantly reduced after the final treatment, with an average resolution rate of 70.5%, which is comparable to excision surgery. A significant decrease in chalazion recurrence rate was apparent after treatment in the IPL-MGX group compared with control. Moreover, the IPL-MGX demonstrated significant advancements throughout noninvasive tear film breakup time (NIBUT) as well as meibum grade in comparison to baseline and those in the the Control group. The use of IPL-MGX was found to be an efficient therapy for reducing the size and recurring frequency of chalazia, as well as for improving the meibomian gland function. It may be considered as a first-line treatment for cases of primary or recurrent chalazia with inflammation.
Journal Article
First report of rare fungal keratitis: Diaporthe aspalathi
by
Dai, Qi
,
Wang, Huiqin
,
Huang, Dan
in
Abscesses
,
Antifungal agents
,
Antifungal Agents - therapeutic use
2025
Background
The plant fungal pathogen
Diaporthe aspalathi
is the causal agent of the southern stem canker disease in soybean. However, human infection caused by
D. aspalathi
has not been previously reported.
Case presentation
We report a case of human keratitis caused by
D. aspalathi
on a 50-year-old woman. She presented to the hospital with redness, pain, decreased vision, and a focal white opacity in the left eye, which had been injured by a thorn 3.5 months earlier. Slit lamp examination revealed moderate conjunctival hyperemia, intact corneal epithelium, mild stromal edema, and thick white endothelial exudates in the inferior cornea.
D. aspalathi
was identified through DNA sequencing. The patient was treated with a combination of antifungal agents and therapeutic penetrating keratoplasty, resulting in scarring and vascularization of the graft.
Conclusion
Our report shows a rare case of corneal infection caused by
D. aspalathi
and highlights the importance of early suspicion of fungal keratitis in patients with a history of corneal plant trauma.
Journal Article
Interaction between smoking and diabetes in relation to subsequent risk of cardiovascular events
2022
Background
Whether smoking modifies the associations of diabetes and risk factor management with subsequent risk of cardiovascular disease (CVD), and whether the smoking related CVD risk differs among people with and without diabetes are unclear. This study aimed to examine the associations and interactions of smoking, diabetes, and risk factor management in relation to incident CVD.
Methods
This nationwide, population-based, prospective cohort study of 20 communities from various geographic regions recruited adults aged 40 years or older during 2011–2012. The follow-up survey was conducted between 2014 and 2016. This study included 126,181 participants who were free from CVD at baseline.
Results
Study participants included 19,397 current smokers (15.4%), 6,049 former smokers (4.8%), and 100,735 never smokers (79.8%). Mean (SD) age ranged from 55.8 (8.6) years to 60.7 (9.1) years. Compared with never smokers, heavy smokers exhibited a greater risk of CVD events among participants with diabetes (multivariable-adjusted hazard ratio [HR], 1.45; 95% CI, 1.17–1.78) than among participants without diabetes (HR, 1.20; 95% CI, 1.01–1.42; P for interaction = 0.006). Compared with participants without diabetes, participants with diabetes who were never smokers and had 5 or more controlled risk factors showed no significantly excess CVD risk (HR, 0.93; 95% CI, 0.71–1.22), but the cardiovascular benefits from risk factor management were counteracted among participants with diabetes who were current smokers (HR, 1.28; 95% CI, 0.77–2.14) or former smokers (HR, 1.22; 95% CI, 0.66–2.28).
Conclusions
Smoking and diabetes interacted with each other in relation to increased risk of CVD events, and the beneficial effect of risk factor management on CVD risk among participants with diabetes was attenuated by current or former smoking.
Journal Article
Hypothesis testing and sample size considerations for the test-negative design
by
Dean, Natalie E.
,
Longini, Ira M.
,
Yang, Yang
in
Analysis
,
Case-Control Studies
,
Case-control study
2024
The test-negative design (TND) is an observational study design to evaluate vaccine effectiveness (VE) that enrolls individuals receiving diagnostic testing for a target disease as part of routine care. VE is estimated as one minus the adjusted odds ratio of testing positive versus negative comparing vaccinated and unvaccinated patients. Although the TND is related to case–control studies, it is distinct in that the ratio of test-positive cases to test-negative controls is not typically pre-specified. For both types of studies, sparse cells are common when vaccines are highly effective. We consider the implications of these features on power for the TND. We use simulation studies to explore three hypothesis-testing procedures and associated sample size calculations for case–control and TND studies. These tests, all based on a simple logistic regression model, are a standard Wald test, a continuity-corrected Wald test, and a score test. The Wald test performs poorly in both case–control and TND when VE is high because the number of vaccinated test-positive cases can be low or zero. Continuity corrections help to stabilize the variance but induce bias. We observe superior performance with the score test as the variance is pooled under the null hypothesis of no group differences. We recommend using a score-based approach to design and analyze both case–control and TND. We propose a modification to the TND score sample size to account for additional variability in the ratio of controls over cases. This work enhances our understanding of the data generating mechanism in a test-negative design (TND) and how it is distinct from that of a case-control study due to its passive recruitment of controls.
Journal Article
Associations of area-level socioeconomic status and individual factors with mortality in China: a nationwide prospective cohort study
by
Zheng, Ruizhi
,
Wang, Youmin
,
Tang, Xulei
in
Cardiovascular disease
,
Cardiovascular diseases
,
Cohort analysis
2025
BackgroundAlthough socioeconomic inequality in mortality has long been a public health focus, the associations of area-level socioeconomic status (SES) and individual-level factors with mortality have not been well investigated, especially in China with rapid industrial development.MethodsIn this nationwide, population-based, prospective cohort study, adults aged over 40 from 29 counties were included in the China Cardiometabolic Disease and Cancer Cohort study. The composite area deprivation index of area-level SES was generated from national census data and categorised into tertiles. Cox proportional hazards models were fitted to calculate HRs and 95% CIs for area-level SES with the risk of mortality, and comprehensive individual socioeconomic, lifestyle, and metabolic factors were examined as potential mediators.ResultsA total of 174 004 participants were included. During a median follow-up of 10.1 years, low area-level SES was associated with 34% increased risk of all-cause mortality (95% CI 1.27 to 1.42), 76% increased risk of cardiovascular disease (CVD) mortality (95% CI 1.59 to 1.94) and 13% increased risk of non-CVD mortality (95% CI 1.05 to 1.21) compared with high area-level SES. The association between area-level SES and all-cause mortality was partly mediated by individual socioeconomic, lifestyle and metabolic factors, contributing 3.8%, 20.7% and 8.9%, respectively. Furthermore, individuals with low area-level SES and low individual SES, unhealthy lifestyles, or poor metabolic status had the highest risk of mortality.ConclusionsSignificant area-level socioeconomic inequalities in mortality exist in China. Comprehensive interventions targeting both area-level circumstances and individual socioeconomic, lifestyle and metabolic factors were key strategies to reduce these inequalities.
Journal Article
Factors Related to Bone Metabolism in Kidney Transplant Recipients
2021
This study is aimed at establishing the prevalence of osteoporosis and osteopenia in kidney transplant recipients (KTRs) and determining the risk factors for bone mass loss. We invited KTRs who were under regular follow-up at Jiangxi Provincial People’s Hospital Affiliated with Nanchang University to attend an assessment of osteoporotic risk assessed by questionnaire, biochemical profile, and dual-energy X-ray absorptiometry (DXA) scanning of the lumbar spine, total hip, and femoral neck. Binary logistic regression models were used to investigate the relationship between the different variables and bone mass density (BMD). A total of 216 patients satisfied the inclusion criteria. The group consisted of 156 men (72.22%) and 60 women (27.78%), and the mean age was 41.50±9.98 years. There were 81 patients with normal bone mass (37.50%) and 135 patients with bone mass loss (62.50%). Logistic regression analysis showed that a higher phosphorus value and higher alkaline phosphatase concentration and a longer use of glucocorticoids were risk factors for bone mass loss in KTRs, and maintaining an appropriate weight and exercising an appropriate number of times per week helped to maintain bone mass.
Journal Article
First case of Phthirus pubis and Demodex co-infestation of the eyelids: a case report
2021
Background
Phthirus pubis
is an obligate parasite of human beings. Demodex spp. is a much more common parasite of human beings. However,
P. pubis
infestation accompanied by Demodex mite infestation in eye has not been reported.
Case presentation
We report the first case of
Phthirus pubis
and
Demodex
co-infestation on a 48-years-old woman. She presented to the hospital with itching and burning at her right eye for 2 weeks. Slit lamp examination revealed multiple nits and adults of
P. pubis
anchored to both upper and lower eyelashes. Eyelashes were trimmed, moxifloxacin eye ointment and fluorometholone eye drops were initiated daily. However, itching didn’t improve after 2 weeks of treatment. Light microscopy examination of eyelashes revealed infestation with
Demodex
. The patient was treated with lid scrubs with 25% tea tree oil daily for 4 weeks and was completely cured.
Conclusion
Our report shows the importance of an early and comprehensive diagnosis, because both phthiriasis palpebrarum and demodicosis can be confused with blepharitis.
Journal Article