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Over the last two decades, atmospheric sulfur dioxide (SO2) concentrations have decreased in air-polluted regions. However, this decrease was accompanied by a rise in cloud water acidity (pH), which remains below 5. With this change, gas-phase hydrogen peroxide (H2O2) exceeded SO2 in most of these regions. These conditions where SO2 < H2O2 occurred at Mt. Norikura (2770 m.a.s.l.) during the 1900s. Therefore, to reveal the aqueous-phase oxidation of SO2 by H2O2, the present study investigated the inorganic and organic major ions and Se concentrations in cloud water in addition to aerosols and concentrations of gas species including O3, NOx, and SO2 collected in cloud events at Mt. Norikura during the summer of 1999. Backward air trajectory analyses indicated that the (NH4)2SO4 and trace (NH4)HSO4 aerosols originated from industrial and metropolitan areas in southwest Japan. The cloud water pH was between 3.6 and 4.4. The aqueous-phase SO42−/NO3− ratio (1.2 ± 0.6) was lower than that of the early 1990s (2.2) and 1960s (> 10) in our observation site, which was due to power plant restrictions in Japan since the 1970s. The ion species concentrations in cloud water indicated that cloud acidification resulted from dissolution of gaseous HNO3 and SO2, whereas gaseous hydrochloric acid and organic acid had a minor contribution to the acidification. Significant losses of Cl− and Mg2+ were observed in some of the cloud water. The excess value of non-sea-salt sulfate (nss-SO42−) over NH4+ in cloud water implies the in-cloud oxidation of gaseous SO2 to aqueous SO42−. A Se tracer technique was used to conduct in-situ measurements of in-cloud SO42− production. The results showed that the in-cloud production varied in a range between 7 ± 2 and 41 ± 14%. This temporal variation might be due to ambient SO2 concentrations based on Henry’s law.

Measurements of peroxide concentrations in fog water were conducted near the summit of Mt. Norikura (altitude, 2770m) in central Japan, and at the midslope of Mt. Oyama (altitude, 680m), southwest of the Kanto Plain. The concentrations of peroxide at Mt. Norikura, far from industrial regions, ranged from 3 to 120 µ M during the summer and early autumn in 1993. The potential capacity for SO^sub 2^ oxidation appears to be very high near the summit of Mt. Norikura. Analysis of the chemical composition of three-stage size-fractionated fog water samples collected at Mt. Norikura showed that the concentrations of peroxide were apparently independent of droplet size, whereas the concentrations of chemical constituents mainly derived from secondary aerosols and the acidity were higher in smaller droplets. Peroxide concentrations in fog water were low (< 5 µ M) at Mt. Oyama, located near heavy industrial areas, and lower than those in rain water sampled simultaneously (0.2-33 µ M). Especially, peroxide was scarcely detected in strongly acidic fogs (< 0.2 µ M). Peroxide might have been decomposed by SO^sub 2^ (S(IV)) oxidation in the aqueous-phase.[PUBLICATION ABSTRACT]

A one-dimensional 3rd-order turbulence closure model with size-resolved microphysics and radiative transfer has been developed for investigating aerosol and cloud interactions of the stratocumulus-topped marine boundary layer. A new method is presented for coupling between the dynamical model and the mierophysical model. This scheme allows the liquid water related correlations to be directly calculated rather than parameterized. On 21 April 2001, a marine stratocumulus was observed by the Caesar aircraft over the west Pacific Rim south of Japan during the 2001 APEX/ACE-Asia field measurements. This cloud is simulated by the model we present here. The model results show that the general features of the stratocumulus-topped marine boundary layer predicted by the model are in agreement with the measurements. A new onboard cloud condensation nuclei (CCN) counter provides not only total CCN number concentration (as the traditional CCN counters do at a certain supersaturation) but also the CCN size distribution information. Using these CCN data, model responses to different CCN initial concentrations are examined. The model results are consistent with both observations and expectations.The numerical results show that the cloud microphysieal properties are changed fundamentally by different initial CCN concentrations but the cloud liquid water content does not differ significantly. Different initial CCN loadings have large impacts on the evolution of cloud microstructure and radiation transfer while they have a modest effect on thermodynamics. Increased CCN concentration leads to significant decrease of cloud effective radius.

An algorithm was developed for retrieving cloud geometrical thickness from a measured liquid water path and equivalent width of 0.94-μm water vapor absorption band. The algorithm was applied to aircraft observations obtained by a microwave radiometer and a spectrometer in the winter of 1991 over the western North Pacific Ocean. Retrieved values of the cloud geometrical thickness are apt to be smaller than those observed by eye, especially for horizontally inhomogeneous clouds. Measured cloud albedos in the visible and near-infrared spectral region were also compared with calculated values. For homogeneous clouds there exists a single droplet size distribution that satisfies both spectral regions. However, for inhomogeneous clouds no single size distribution exists that satisfies the albedo observed in both spectral regions.

CD169+ macrophages are suggested to play a pivotal role in establishing anti‐tumor immunity. They capture dead tumor cell‐associated antigens and transfer their information to lymphocsytes, including CD8+ T cells, which is important for successful tumor suppression. This study aimed to determine the prognostic significance of CD169+ macrophages residing in the tumor‐draining lymph nodes from cases of bladder cancer. In this retrospective study, 44 bladder cancer patients who received radical cystectomy were examined. The abundance of CD169+ macrophages in the regional lymph nodes and the number of CD8+ T cells in the primary tumor were investigated by immunohistochemistry. A CD169 score was calculated based on the intensity of CD169 staining and the proportion of CD169+ macrophages, and the scores were compared to the patients’ clinicopathological parameters. A high CD169 score was significantly associated with low T stage and with a high number of CD8+ T cells infiltrating into the tumor. The group with high CD169 expression had significantly longer cancer‐specific survival than the group with low CD169 expression (5‐year cancer‐specific survival rate: 83.3% vs 31.3%). In a multivariate analysis, the CD169 score was identified as a strong and independent favorable prognostic factor for cancer‐specific survival. Our findings suggest that CD169+ macrophages in the lymph nodes enhance anti‐tumor immunity by expanding CD8+ T cells in bladder cancer. The CD169 score may serve as a novel marker for the evaluation of bladder cancer prognosis. Dead tumor cells are delivered to draining lymph nodes via lymphatic vessel. CD169+ macrophages in the regional lymph nodes capture dead tumor cells and present the tumor antigen to CD8+ T cells. The activated CD8+ T cells travel to the bladder tumor and suppress their proliferation.

Background Person with human immunodeficiency virus type-1 (PWH) are prone to chronic inflammation due to residual viral production, even with antiretroviral therapy (ART), which increases the risk of age-related diseases. There is also limited information on changes in the intestinal environment of PWH during ART. In this longitudinal study, we investigated changes in the gut microbiota, persistence of chronic inflammation, interactions between the gut environment and inflammation, and metabolic changes in PWH using long-term ART. Results We analyzed changes in clinical parameters and gut microbiota in 46 PWH over a mean period of 4 years to understand the influence of gut dysbiosis on inflammation. Overall, changes in the gut microbiota included a decrease in some bacteria, mainly involved in short-chain fatty acid (SCFA) production, and an increase in certain opportunistic bacteria. Throughout the study period, an increase in bacterial-specific metabolic activity was observed in the intestinal environment. Continued decline in certain bacteria belonging to the Clostridia class and metabolic changes in gut bacteria involved in glucose metabolism. Additionally, patients with a low abundance of Parabacteroides exhibited low bacterial alpha diversity and a significant increase in body mass index (BMI) during the study period. Monocyte chemoattractant protein 1, a marker of macrophage activation in the plasma, continued to increase from baseline (first stool collection timepoint) to follow-up (second stool collection timepoint), demonstrating a mild correlation with BMI. Elevated BMI was mild to moderately correlated with elevated levels of plasma interleukin 16 and chemokine ligand 13, both of which may play a role in intestinal inflammation and bacterial translocation within the gut microbiota. The rate of BMI increase correlated with the rate of decrease in certain SCFA-producing bacteria, such as Anaerostipes and Coprococcus 3 . Conclusion Our data suggest that despite effective ART, PWH with chronic inflammation exhibit persistent dysbiosis associated with gut inflammation, resulting in a transition to an intestinal environment with metabolic consequences. Moreover, the loss of certain bacteria such as Parabacteroides in PWH correlates with weight gain and may contribute to the development of metabolic diseases.

Background People living with HIV (PLWH) with chronic inflammation may have an increasing risk for coronavirus disease 2019 (COVID-19) severity; however, the impact of their gut microbiota on COVID-19 is not fully elucidated. Here, we analyzed the temporal changes in the gut microbiota composition of hospitalized severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-infected PLWH (PLWH-CoV) and their correlation with COVID-19 severity. Result The 16S rRNA analysis results using stool samples (along the timeline from disease onset) from 12 hospitalized PLWH-CoV, whose median CD4 + T cell count was 671 cells/µl, were compared to those of 19 healthy people and 25 PLWH. Bacterial diversity in PLWH-CoV is not significantly different from that of healthy people and SARS-CoV-2 non-infected PLWH, but a significant difference in the microbiota diversity was observed in the classification according to the disease severity. Immediately after the disease onset, remarkable changes were observed in the gut microbiota of PLWH-CoV, and the changing with a decrease in some short-chain fatty acid-producing bacteria and an increase in colitis-related pathobiont. In the second week after disease onset, relative amounts of specific bacteria distinguished between disease severity. One month after the disease onset, dysbiosis of the gut microbiota persisted, and the number of Enterobacteriaceae, mainly Escherichia-Shigella , which is potentially pathogenic, increased and were enriched in patients who developed post-acute sequelae of COVID-19 (PASC). Conclusion The changes in the gut microbiota associated with SARS-CoV-2 infection observed in PLWH in this study indicated a persistent decrease in SCFA-producing bacteria and an intestinal environment with an increase in opportunistic pathogens associated with enteritis. This report demonstrates that the intestinal environment in PLWH tends to show delayed improvement even after COVID-19 recovery, and highlights the importance of the dysbiosis associated with SARS-CoV-2 infection as a potential factor in the COVID-19 severity and the PASC in PLWH.

Survival strategy of bacteria is expanded by extrachromosomal elements (ECEs). However, their genetic diversity and functional roles for adaptability are largely unknown. Here, we discover a novel family of intracellular ECEs using 56 saliva samples by developing an efficient microbial DNA extraction method coupled with long-read metagenomics assembly. Even though this ECE family was not hitherto identified, our global prevalence analysis using 476 salivary metagenomic datasets elucidates that these ECEs reside in 74% of the population. These ECEs, which we named, “Inocles”, are giant plasmid-like circular genomic elements of 395 kb in length, including Streptococcus as a host bacterium. Inocles encode a series of genes that contribute to intracellular stress tolerance, such as oxidative stress and DNA damage, and cell wall biosynthesis and modification involved in the interactions with oral epithelial cells. Moreover, Inocles exhibit significant positive correlations with immune cells and proteins responding to microbial infection in peripheral blood. Intriguingly, we examine and find their marked reductions among 68 patients of head and neck cancers and colorectal cancers, suggesting its potential usage for a novel biomarker of gastrointestinal cancers. Our results suggest that Inocles potentially boost the adaptive capacity of host bacteria against various stressors in the oral environment. This study identified prevalent giant extrachromosomal elements from the human oral microbiome. The genetic and ecological analysis provides insight on the potential contribution of this element in adaptation against multiple oral environmental stressors.