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Abstract Vertebrates use cone cells in the retina for color vision and rod cells to see in dim light. Many deep-sea fishes have adapted to their environment to have only rod cells in the retina, while both rod and cone genes are still preserved in their genomes. As deep-sea fish larvae start their lives in the shallow, and only later submerge to the depth, they have to cope with diverse environmental conditions during ontogeny. Using a comparative transcriptomic approach in 20 deep-sea fish species from eight teleost orders, we report on a developmental cone-to-rod switch. While adults mostly rely on rod opsin (RH1) for vision in dim light, larvae almost exclusively express middle-wavelength-sensitive (“green”) cone opsins (RH2) in their retinas. The phototransduction cascade genes follow a similar ontogenetic pattern of cone—followed by rod-specific gene expression in most species, except for the pearleye and sabretooth (Aulopiformes), in which the cone cascade remains dominant throughout development, casting doubts on the photoreceptor cell identity. By inspecting the whole genomes of five deep-sea species (four of them sequenced within this study: Idiacanthus fasciola, Chauliodus sloani; Stomiiformes; Coccorella atlantica, and Scopelarchus michaelsarsi; Aulopiformes), we found that they possess one or two copies of the rod RH1 opsin gene, and up to seven copies of the cone RH2 opsin genes in their genomes, while other cone opsin classes have been mostly lost. Our findings hence provide molecular evidence for a limited opsin gene repertoire in deep-sea fishes and a conserved vertebrate pattern whereby cone photoreceptors develop first and rod photoreceptors are added only at later developmental stages.

Numbers of European glass eels ( Anguilla anguilla) monitored along the Atlantic and Mediterranean coasts of Europe currently serve as the main stock indicator in assessment of this critically endangered species. Spawning, however, takes place exclusively in the Sargasso Sea, several thousand kilometers away. The beginning of its complex lifecycle is characterized by a distant and lengthy larval drift, before the young-of-the-year reach the monitoring stations at the European coasts. The oceanic mechanisms regulating dispersal and distribution of European eel leptocephalus larvae, before they metamorphose into glass eels and colonize future growth habitats, are still poorly understood and data are scarce. Here, we present oceanographic and leptocephalus catch data from a 24-h station on board of the German Research Vessel Meteor, covering one event cycle of the tide-derived change of hydrographic conditions in the central part of the Strait of Gibraltar. Results of this study provide detailed insights on how the exchange of water masses between the Atlantic and the Mediterranean Sea may favor or prevent transport and migration of eel larvae through the Strait, which potentially plays a decisive role in timing and magnitude of larval recruitment events into the entire Mediterranean region.

Abstract In response to the severe decline of the European Eel Anguilla anguilla stock in recent decades, various data frameworks and research efforts toward improved management rely on the availability of site‐specific biometric data. At the same time, scientists are obligated to minimize the negative effects (stress, harm, and sacrifice) of their samplings on individuals and the population without compromising data quality. In‐field methods for biometric measurements must be quick, precise, and practical for the user. Essential information that is typically required in (large‐scale) eel monitoring programs includes body length, mass, sex, and maturation stage. As live eels are difficult to handle, individuals are typically anesthetized or killed (and sometimes stored frozen to postpone measurements) to obtain the necessary biometrics. The primary purpose of this paper was to explore the suitability of a nonlethal method based on photography for obtaining essential biometrics and maturation stage from live European Eels A. anguilla in a timely manner. In addition, we evaluated the relative accuracy of measuring the parameters that are necessary for assessing maturation stages in eels after defrosting and examined the necessity of correcting for potential shrinkage of eyes and pectoral fin. Both procedures were compared against a standard reference of measurements from freshly killed eels. We found that the minimally invasive method using alive measurements of eels' body length and mass together with digital measurements of eyes and pectoral fin from photographs had the highest agreement for maturation stage outcome with the fresh reference. Our results further reveal the necessity of correcting for shrinkage of eyes and pectoral fins (in addition to length and mass) after freezing to maximize reliability in stage classification. Consequently, we provide specialized formulae to apply shrinkage corrections for eye diameter and pectoral fin length.

Acoustic telemetry provides valuable insights into behavioural patterns of aquatic animals such as downstream migrating European eels ( Anguilla anguilla ), so called silver eels. The behaviour of silver eels during the migration is known to be influenced by environmental factors, yet so is the performance of acoustic telemetry networks. This study quantifies the impact of these environmental factors on both, migration behaviour and receiver performance to determine possible limiting conditions for detecting tagged eels in tidal areas. A dominance analysis of the selected models describing migration speed, activity and receiver performance was conducted following 234 silver eels that were tagged with acoustic transmitters and observed by a receiver network in the Ems River during two subsequent migration seasons. The results suggest a passive locomotion of silver eels during their downstream migration by taking advantage of selective tidal stream transport (STST). It is further shown that water temperature, salinity, turbidity, precipitation, and especially current velocity were major parameters influencing migration activity and speed. At the same time, analyses of the detection probability of tagged eels under varying environmental conditions indicated a decreased receiver performance during increased current velocities, meaning that high migration activity and -speed coincides with reduced detection probability. Consequently, there is a risk that particularly during phases of increased activity, migration activity may be underestimated due to reduced acoustic telemetry performance. To avoid bias in telemetry studies, it is, therefore, crucial to conduct range tests and adjust the receiver placement in areas and conditions of high current velocities.

Leptocephali of the shallow-water congrid eel Ariosoma balearicum are abundant during February–April in the Sargasso Sea, and larval and adult meristic data indicates this species includes several regional subpopulations/cryptic species. Four multiple-transect larval surveys (2011, 2014, 2015, 2017) were used to examine the geographic size distribution of two myomere-count types of A. balearicum leptocephali. High-count (HC) larvae were consistently mostly between 80 and 100 mm in size (60–132 mm; 87.9 ± 6.8 mm) as observed previously, and frequently had narrow size ranges. The usually larger LC larvae (78–176 mm; 111.4 ± 26.7 mm) were more abundant in western or central areas. HC larvae tended to decrease in size from west to east and increase from south to north. Catch rates were geographically variable relative to hydrographic structure/frontal positions across the wide 2015 sampling area. Mitochondrial 16 s rRNA sequences of HC and LC larvae show species-level differences, providing evidence of the existence of two cryptic species with different larval dispersal strategies in the Sargasso Sea subtropical gyre region. The HC larvae disperse widely into the gyre, seemingly through Gulf Stream recirculation or eastward frontal-jet flows, and apparently must use directional swimming to cross the Florida Current to recruit into the South Atlantic Bight. LC leptocephali may mostly be retained near the Bahamas, with few larvae dispersing into the gyre. This seems to indicate natural selection occurred for spawning location and larval behavior due to the powerful Florida Current/Gulf Stream, resulting in two completely different spawning and larval dispersal strategies within a local geographic region.

Gelatinous zooplankton (GZ) such as medusae, ctenophores, siphonophores, pyrosomes and salps are important components of oceanic pelagic communities and small calycophoran siphonophores (CS) are typically abundant at shallow depths. The Sargasso Sea spawning area of the Atlantic catadromous freshwater eels has a regular pattern of shallow autumn to spring temperature fronts. There is limited information about the southern Sargasso Sea GZ fauna, and it is not known which species are distributed across these frontal zones. Plankton samples from a survey of larval European eel ( Anguilla anguilla ) abundance in March and April 2017 using an Isaacs-Kidd Midwater Trawl (0–300 m, 35 stations, three transects) were used to examine the distribution and abundance of net-captured CS and other GZ species in relation to oceanographic characteristics. More than 2200 specimens of 15 taxa were sub-sampled, with five CS ( Abylopsis tetragona , A. eschscholtzii , Chelophyes appendiculata , Eudoxoides spiralis and E. mitra ) dominating catches at every station. GZ were most abundant around the 22 and 24 °C isotherms, and higher abundances of CS in the north were correlated with lower water temperature. The widespread presence of CS across the European eel spawning area is consistent with a recent study detecting their DNA sequences in the gut contents of young eel larvae collected in the Sargasso Sea, suggesting CS material was either eaten directly or as part of ingested marine snow particles. The present study shows that both types of organisms occupy the southern Sargasso Sea during the European eel spawning season.

Tidal estuaries provide important spawning, nursery and feeding habitats for a wide diversity of species and serve as transit areas for diadromous fishes. However, they are globally among the most impacted aquatic ecosystems, pressured by anthropogenic alterations and global change. Assessing local fish communities and their temporal dynamics is crucial to determine the ecological baseline of these ecosystems and to serve as an indicator of their ecological status. Here, we studied the fish community in a typical estuary of the Wadden Sea in central Europe, the strongly tidal and highly anthropised River Ems. Weekly bycatch samples from a commercial stow net fishery were analysed regarding fish community composition, individual length and biomass covering fourteen consecutive months. Thirty‐nine diadromous, estuarine, marine and freshwater species were recorded, amending previously reported numbers upward. Total fish abundance peaked in November 2020 and was lowest in the first half of the year 2021, corroborating previous observations of a cyclical intra‐annual community pattern in estuaries. The community structure changed significantly throughout the year, coinciding with variation in water temperature, dissolved oxygen concentrations, salinity and atmospheric pressure. During most months, European smelt ( Osmerus eperlanus ) and flounder ( Platichthys flesus ) dominated in abundance, and sand gobies ( Pomatoschistus spp.), European eel ( Anguilla anguilla ), river lamprey ( Lampetra fluviatilis ), three‐spined stickleback ( Gasterosteus aculeatus ) and European perch ( Perca fluviatilis ) occurred in substantial shares during single months. Some historically common species such as twaite shad ( Alosa fallax ), houting ( Coregonus cf. oxyrinchus ) and Atlantic salmon ( Salmo salar ) showed very low abundances. The non‐native Western tubenose goby ( Proterorhinus semilunaris ) was first recorded in this area. Intra‐annual changes in abundance and length composition of species of commercial or conservational interest, e.g., smelt and river lamprey, are discussed in detail. We show that high sampling resolution and complete annual coverage are crucial for a full picture of the fish community and conclude that the ecological status of the River Ems remains poor.

During their once-in-a-lifetime transoceanic spawning migration, anguillid eels do not feed, instead rely on energy stores to fuel the demands of locomotion and reproduction while they reorganize their bodies by depleting body reserves and building up gonadal tissue. Here we show how the European eel (Anguilla anguilla) breaks down its skeleton to redistribute phosphorus and calcium from hard to soft tissues during its sexual development. Using multiple analytical and imaging techniques, we characterize the spatial and temporal degradation of the skeletal framework from initial to final gonadal maturation and use elemental mass ratios in bone, muscle, liver, and gonadal tissue to determine the fluxes and fates of selected minerals and metals in the eels’ bodies. We find that bone loss is more pronounced in females than in males and eventually may reach a point at which the mechanical stability of the skeleton is challenged. P and Ca are released and translocated from skeletal tissues to muscle and gonads, leaving both elements in constant proportion in remaining bone structures. The depletion of internal stores from hard and soft tissues during maturation-induced body reorganization is accompanied by the recirculation, translocation, and maternal transfer of potentially toxic metals from bone and muscle to the ovaries in gravid females, which may have direct deleterious effects on health and hinder the reproductive success of individuals of this critically endangered species.

BackgroundIn Morocco, fish is an important protein source especially, even not exclusively, for coastal communities and marketed fresh all along the coastline. One of the main targets of coastal artisanal fisheries is the European conger (Conger conger, Linnaeus 1758), a widely distributed benthic predatory species of a maximum weight of up to 50 kg. However, information on heavy metal contamination of conger is scarce. Therefore, concentrations of mercury, lead and cadmium were analysed in 108 European conger specimens from nine locations along the along the Atlantic and Mediterranean coasts of Morocco to describe the spatial distribution of heavy metal contamination.ResultsThe average heavy metal concentration in all conger samples under investigation was 246.90 ± 216.83 µg mercury/kg wet mass, 74.14 ± 87.02 µg lead/kg wet mass and 255.12 ± 287.15 µg cadmium/kg wet mass respectively. Mercury and cadmium showed a clear site-specific bioaccumulation in European conger but lead does not. Hence, the effect of fish length bias on contamination was corrected through a generalized linear model (GLM) prior to any spatial comparison.ConclusionsDifferent regional hotspots for the three analysed metals are identified and local sources are discussed. Mercury levels in big specimens of European conger exceeded the European threshold level for human consumption at some of the locations under investigation.

The stock of European Eel (Anguilla anguilla L.) has reached an all-time low in 2011. Spawner quality of mature eels in terms of health status and fitness is considered one of the key elements for successful migration and reproduction. Dioxin-like Polychlorinated Biphenyls (dl-PCBs) are known persistent organic pollutants potentially affecting the reproductive capability and health status of eels throughout their entire lifetime. In this study, muscle tissue samples of 192 European eels of all continental life stages from 6 different water bodies and 13 sampling sites were analyzed for contamination with lipophilic dl-PCBs to investigate the potential relevance of the respective habitat in light of eel stock management. Results of this study reveal habitat-dependent and life history stage-related accumulation of targeted PCBs. Sum concentrations of targeted PCBs differed significantly between life stages and inter-habitat variability in dl-PCB levels and -profiles was observed. Among all investigated life stages, migrant silver eels were found to be the most suitable life history stage to represent their particular water system due to habitat dwell-time and their terminal contamination status. With reference to a possible negative impact of dl-PCBs on health and the reproductive capability of eels, it was hypothesized that those growing up in less polluted habitats have a better chance to produce healthy offspring than those growing up in highly polluted habitats. We suggest that the contamination status of water systems is fundamental for the life cycle of eels and needs to be considered in stock management and restocking programs.