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EFP received financial support from the Regional Government of Asturias and the FP7 – Marie Curie – COFUND programme of the European Commission (Grant ‘Clarín’ ACB17-19). BJ-A and EFP were funded by the Spanish Research Agency (PID2019-108636GA/AEI/10.13039/501100011033) (...)

Saatkamp, A., Cochrane, A., Commander, L., Guja, L., Jimenez-Alfaro, B., Larson, J., Nicotra, A., Poschlod, P., Silveira, F.A.O., Cross, A., Dalziell, E.L., Dickie, J., Erickson, T.E., Fidelis, A., Fuchs, A., Golos, P.J., Hope, M., Lewandrowski, W., Merritt, D.J., Miller, B.P., Miller, R., Offord, C.A., Ooi, M.K.J., Satyanti, A., Sommerville, K.D., Tangney, R., Tomlinson, S., Turner, S., Walck, J.L.

Beta-diversity has been repeatedly shown to decline with increasing elevation, but the causes of this pattern remain unclear, partly because they are confounded by coincident variation in alpha- and gamma-diversity. We used 8795 forest vegetation-plot records from the Czech National Phytosociological Database to compare the observed patterns of beta diversity to null-model expectations (beta-deviation) controlling for the effects of alpha- and gamma-diversity. We tested whether β-diversity patterns along a 1200 m elevation gradient exclusively depend on the effect of varying species pool size, or also on the variation of the magnitude of community assembly mechanisms determining the distribution of species across communities (e.g. environmental filtering, dispersal limitation). The null model we used is a novel extension of an existing null-model designed for presence/absence data and was specifically designed to disrupt the effect of community assembly mechanisms, while retaining some key features of observed communities such as average species richness and species abundance distribution. Analyses were replicated in ten subregions with comparable elevation ranges. Beta-diversity declined along the elevation gradient due to a decrease in gamma-diversity, which was steeper than the decrease in alpha-diversity. This pattern persisted after controlling for alpha- and gamma-diversity variation, and the results were robust when different resampling schemes and diversity metrics were used. We conclude that in temperate forests the pattern of decreasing beta-diversity with elevation does not exclusively depend on variation in species pool size, as has been hypothesized, but also on variation in community assembly mechanisms. The results were consistent across resampling schemes and diversity measures, thus supporting the use of vegetation-plot databases for understanding patterns of beta-diversity at the regional scale.

Analyses of functional traits have become fundamental tools for understanding patterns and processes in plant community ecology. In this context, regenerative seed traits play an important, yet overlooked, role because they largely determine the ability of plants to disperse and re-establish. A survey of recent publications in community ecology suggests that seed germination traits in particular are neglected at the expense of other relevant but overused traits based only on seed morphology. As a response to this bias, we discuss the functional significance of seed germination traits in comparison with morphological and biophysical seed traits, and advocate their use in vegetation science. We also demonstrate how research in community assembly, climate change and restoration ecology can benefit from the inclusion of germination traits, encompassing functions that cannot be explained solely by adult plant traits. Seed germination experiments conducted in the laboratory or field to quantify these traits provide ecologically meaningful and relatively easy-to-obtain information about the functional properties of plant communities. We argue that bridging the gap between seed physiologists and community ecologists will improve the prediction of plant assemblages, and propose further perspectives for including seed traits into the research agenda of functional community ecologists.

Globally, annual expenditure on ecological restoration of degraded areas for habitat improvement and biodiversity conservation is approximately $18bn. Seed farming of native plant species is crucial to meet restoration goals, but may be stymied by the disconnection of academic research in seed science and the lack of effective policies that regulate native seed production/supply. To illustrate this problem, we identified 1,122 plant species important for European grasslands of conservation concern and found that only 32% have both fundamental seed germination data available and can be purchased as seed. The “restoration species pool,” or set of species available in practice, acts as a significant biodiversity selection filter for species use in restoration projects. For improvement, we propose: (1) substantial expansion of research and development on native seed quality, viability, and production; (2) open‐source knowledge transfer between sectors; and (3) creation of supportive policy intended to stimulate demand for biodiverse seed.

This work was supported by the Czech Science Foundation (projects 19-14394Y to FEMC, LC and GO; 19-01775S to MHo; 19-28491X to MCh and MHa) and by the long-term research development project no. RVO 67985939 of the Czech Academy of Sciences.

Alpine ecosystems are hotspots of biodiversity despite their cold climates. Here we investigate spatial patterns in the phylogenetic diversity (i.e. the degree of species relatedness) of European alpine floras and quantify the influence of climatic conditions since the late Pleistocene and historical climatic instability in shaping these patterns. We collected species‐pool data for 22 alpine regions in central and southern Europe and calculated phylogenetic diversity within and between regions using two metrics sensitive to terminal branching in the phylogeny. We regressed phylogenetic diversity against macroclimatic variables representing seasonal extremes between the Last Glacial Maximum (LGM; 21 000 years BP) and the present at 1000‐year intervals. We found the lowest phylogenetic diversity in the Carpathians and the central Alps, and the highest in the north‐eastern and southern Iberian Peninsula. Phylogenetic diversity decreased with temperature seasonality and low winter temperature. While the effect of temperature seasonality was relatively constant over time, the influence of winter temperature decreased after the LGM. We also found that phylogenetic diversity decreased with historical climatic instability. Between regions, phylogenetic diversity was mainly explained by current climatic distance rather than geographic distance, suggesting that alpine floras were primarily driven by species sorting along climatic gradients. Our results confirm the role of environmental filtering in shaping the current phylogenetic diversity of alpine floras, resulting in more closely related lineages in regions with relatively cold and unstable climates. We also highlight the importance of explicitly incorporating climatic variation through time to better understand the processes structuring the current biodiversity of alpine floras.

This work was funded by grants CGL2014- 53899-P/AEI/FEDER.UE and CGL2017-85191-P/AEI/FEDER.UE of the Spanish Ministry of Science, Innovation and Universities, and grant IDI/2018/000151 of Principado de Asturias.

Aim: Woodlands make up a third of European territory and carry out important ecosystem functions, yet a comprehensive overview of their invasion by alien plants has never been undertaken across this continent. Location: Europe. Methods: We extracted data from 251,740 vegetation plots stored in the recently compiled European Vegetation Archive. After filtering (resulting in 83,396 plots; 39 regions; 1970–2015 time period), we analysed the species pool and frequency of alien vascular plants with respect to geographic origin and life-forms, and the levels of invasion across the European Nature Information System (EUNIS) woodland habitats. Results: We found a total of 386 alien plant species (comprising 7% of all recorded vascular plants). Aliens originating from outside of and from within Europe were almost equally represented in the species pool (192 vs. 181 species) but relative frequency was skewed towards the former group (77% vs. 22%) due, to some extent, to the frequent occurrence of Impatiens parviflora (21% frequency among alien plants). Phanerophytes were the most species-rich life-form (148 species) and had the highest representation in terms of relative frequency (39%) among aliens in the dataset. Apart from Europe (181 species), North America was the most important source of alien plants (109 species). At the local scale, temperate and boreal softwood riparian woodland (5%) and mire and mountain coniferous woodland (<1%) had the highest and lowest mean relative alien species richness (percentage of alien species per plot), respectively. Main conclusions: Our results indicate that European woodlands are prone to alien plant invasions especially when exposed to disturbance, fragmentation, alien propagule pressure and high soil nutrient levels. Given the persistence of these factors in the landscape, competitive alien plant species with a broad niche, including alien trees and shrubs, are likely to persist and spread further into European woodlands.

Aim: The regional co-occurrence of contrasting bioclimatic elements (warm-temperate, continental, boreal, arctic-alpine) may be shaped by the distribution of their glacial or post-glacial refugia. We tested this hypothesis using pollen proxies in a region where such refugia are expected, but not unequivocally demonstrated. Location: East-Central Europe (Western Carpathians and adjacent regions). Methods: We compiled pollen spectra from 112 sites distributed across various landscapes for six time-periods from the Late Glacial to the present. Compositional patterns were assessed by principal coordinates analyses (PCoA) with a sensitivity analysis based on a bootstrap technique. Site PCoA scores were interpolated geographically and correlated with palaeoclimatic models. Results: Consistently over the last 15,000 years, the first ordination axis sorted samples according to the proportion of deciduous temperate trees, while the second axis consistently followed an altitudinal gradient that coincided with temperature. The principal gradient was more important than the altitudinal gradient except for the Late Glacial and Bronze & Iron Ages, when both gradients were of similar importance. The fine-grained pattern in the present mountain landscape was formed as late as during early modern colonization. Main conclusions: Since the Late Glacial, the landscape has been differentiated into temperate, continental and cold regions. This finding supports the hypothesis that refugia are a key factor for understanding current biogeography in Central Europe. The Late Glacial occurrence of temperate trees is unlikely to be explained only by gradual migrations from southern Europe. Humid but relatively warm mountains hence might have acted as glacial refugia of temperate forest species, while low-lands and leeward basins might have acted as post-glacial refugia of steppe grasslands. The strong contrast between forested (temperate) and more open continental landscapes during the Early Holocene seems to correspond with recent diversity patterns. Our results highlight the relevance of integrating past landscape trajectories into modern biogeographical models.