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result(s) for
"Jimenez-Rodriguez, Alejandro"
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Active Inference for Learning and Development in Embodied Neuromorphic Agents
by
Jimenez Rodriguez, Alejandro
,
Hamburg, Sarah
,
Htet, Aung
in
active inference
,
Adaptation
,
Artificial intelligence
2024
Taking inspiration from humans can help catalyse embodied AI solutions for important real-world applications. Current human-inspired tools include neuromorphic systems and the developmental approach to learning. However, this developmental neurorobotics approach is currently lacking important frameworks for human-like computation and learning. We propose that human-like computation is inherently embodied, with its interface to the world being neuromorphic, and its learning processes operating across different timescales. These constraints necessitate a unified framework: active inference, underpinned by the free energy principle (FEP). Herein, we describe theoretical and empirical support for leveraging this framework in embodied neuromorphic agents with autonomous mental development. We additionally outline current implementation approaches (including toolboxes) and challenges, and we provide suggestions for next steps to catalyse this important field.
Journal Article
Biological action at a distance: Correlated pattern formation in adjacent tessellation domains without communication
by
James, Sebastian S.
,
Jimenez-Rodriguez, Alejandro
,
Wilson, Stuart P.
in
Biological activity
,
Biology and Life Sciences
,
Cellular automata
2022
Tessellations emerge in many natural systems, and the constituent domains often contain regular patterns, raising the intriguing possibility that pattern formation within adjacent domains might be correlated by the geometry, without the direct exchange of information between parts comprising either domain. We confirm this paradoxical effect, by simulating pattern formation via reaction-diffusion in domains whose boundary shapes tessellate, and showing that correlations between adjacent patterns are strong compared to controls that self-organize in domains with equivalent sizes but unrelated shapes. The effect holds in systems with linear and non-linear diffusive terms, and for boundary shapes derived from regular and irregular tessellations. Based on the prediction that correlations between adjacent patterns should be bimodally distributed, we develop methods for testing whether a given set of domain boundaries constrained pattern formation within those domains. We then confirm such a prediction by analysing the development of ‘subbarrel’ patterns, which are thought to emerge via reaction-diffusion, and whose enclosing borders form a Voronoi tessellation on the surface of the rodent somatosensory cortex. In more general terms, this result demonstrates how causal links can be established between the dynamical processes through which biological patterns emerge and the constraints that shape them.
Journal Article
Automatic Sleep Stages Classification Using EEG Entropy Features and Unsupervised Pattern Analysis Techniques
by
Osorio-Forero, Alejandro
,
Rodríguez-Sotelo, Jose
,
Cirugeda-Roldán, Eva
in
Algorithms
,
Automation
,
Classification
2014
Sleep is a growing area of research interest in medicine and neuroscience. Actually, one major concern is to find a correlation between several physiologic variables and sleep stages. There is a scientific agreement on the characteristics of the five stages of human sleep, based on EEG analysis. Nevertheless, manual stage classification is still the most widely used approach. This work proposes a new automatic sleep classification method based on unsupervised feature classification algorithms recently developed, and on EEG entropy measures. This scheme extracts entropy metrics from EEG records to obtain a feature vector. Then, these features are optimized in terms of relevance using the Q-α algorithm. Finally, the resulting set of features is entered into a clustering procedure to obtain a final segmentation of the sleep stages. The proposed method reached up to an average of 80% correctly classified stages for each patient separately while keeping the computational cost low.
Journal Article
Expansion and contraction of resource allocation in sensory bottlenecks
by
Edmondson, Laura R
,
Saal, Hannes P
,
Jiménez Rodríguez, Alejandro
in
decorrelation
,
efficient coding
,
Neuroscience
2022
Topographic sensory representations often do not scale proportionally to the size of their input regions, with some expanded and others contracted. In vision, the foveal representation is magnified cortically, as are the fingertips in touch. What principles drive this allocation, and how should receptor density, for example, the high innervation of the fovea or the fingertips, and stimulus statistics, for example, the higher contact frequencies on the fingertips, contribute? Building on work in efficient coding, we address this problem using linear models that optimally decorrelate the sensory signals. We introduce a sensory bottleneck to impose constraints on resource allocation and derive the optimal neural allocation. We find that bottleneck width is a crucial factor in resource allocation, inducing either expansion or contraction. Both receptor density and stimulus statistics affect allocation and jointly determine convergence for wider bottlenecks. Furthermore, we show a close match between the predicted and empirical cortical allocations in a well-studied model system, the star-nosed mole. Overall, our results suggest that the strength of cortical magnification depends on resource limits.
Journal Article
The shape of the PCA trajectories and the population neural coding of movement initiation in the basal ganglia
2018
In this work we study the shape of the neural trajectories obtained from Principal Components Analysis (PCA) of neural activity, related to movement initiation, in the basal ganglia of rats. We focus on the relation between global and local aspects of the shape, and on the population code by means of the ensemble structure. We find that the structure of the principal components is intimately related to the ensembles in the population which, in turn, drive the evolution of the neural trajectories. From this point of view, the coding schemes in the input and output stages of the basal ganglia differ, being the output lower dimensional than the input. In the output stage we can identify specific ensembles that explain the main features (sharp points, singular points, etc.) of the shape, revealing novel aspects of the computations performed by these regions during movement. Also, based upon new measures of heterogeneity and sparseness, we conclude that the output stages are homogeneous but dense while the input stages are more heterogeneous. This work also contains novel mathematical results in relation with the restrictions on the shape imposed by the PCA and the by structure of the data. A novel relationship between the principal components and Catalan objects is proved.
Dissertation
Studying the mechanisms of the Somatic Marker Hypothesis in Spiking Neural Networks (SNN)
by
Jiménez-Rodríguez, Alejandro
,
Castillo, Luis Fernando
,
González, Manuel
in
Computer simulation
,
Decision making
,
Hypotheses
2013
In this paper, a mechanism of emotional bias in decision making is studied using Spiking Neural Networks to simulate the associative and recurrent networks involved. The results obtained are along the lines of those proposed by A. Damasio as part of the Somatic Marker Hypothesis, in particular, that, in absence of emotional input, the decision making is driven by the rational input alone. Appropriate representations for the Objective and Emotional Values are also suggested, provided a spike representation (code) of the information.
Journal Article
Biological action at a distance: Correlated pattern formation in adjacent tessellation domains without communication
2021
Tessellations emerge in many natural systems, and the constituent domains often contain regular patterns, raising the intriguing possibility that pattern formation within adjacent domains might be correlated by the geometry, without the direct exchange of information between parts comprising either domain. We confirm this paradoxical effect, by simulating pattern formation via reaction-diffusion in domains whose boundary shapes tessellate, and showing that correlations between adjacent patterns are strong compared to controls that self-organise in domains with equivalent sizes but unrelated shapes. The effect holds in systems with linear and non-linear diffusive terms, and for boundary shapes derived from regular and irregular tessellations. Based on the prediction that correlations between adjacent patterns should be bimodally distributed, we develop methods for testing whether a given set of domain boundaries constrained pattern formation within those domains. We then confirm such a prediction by analysing the development of ‘subbarrel’ patterns, which are thought to emerge via reaction-diffusion, and whose enclosing borders form a Voronoi tessellation on the surface of the rodent somatosensory cortex. In more general terms, this result demonstrates how causal links can be established between the dynamical processes through which biological patterns emerge and the constraints that shape them.
Well posedness and stationary solutions of a neural field equation with synaptic plasticity
We consider the initial value problem associated to the neural field equation of Amari type with plasticity \\[ u_t(x,t)=-u(x,t)+\\int_{\\Omega}w(x,y)[1+\\gamma g( u(x,t) - u(y,t) )] f(u(y,t))\\; dy, \\;(x,t) \\in \\Omega \\times (0, \\infty), \\] where \\(\\Omega\\subset\\mathbb{R}^m\\), \\(f\\) and \\(g\\) are bounded and continuously differentiable functions with bounded derivative, and \\(\\gamma\\ge0\\) is the plasticity synaptic coefficient. We show that the problem is well posed in \\(C_b(\\mathbb{R}^m)\\) and \\(L^1(\\Omega)\\) with \\(\\Omega\\) compact. The proof follows from a classical fixed point argument when we consider the equation's flow. Strong convergence of solutions in the no plasticity limit (\\(\\gamma\\to0\\)) to solutions of Amari's equation is analysed. Finally, we prove existence of stationary solutions in a general way. As a particular case, we show that the Amari's model, after learning, leads to the stationary Schr\"odinger equation for a type of gain modulation.
Heterogeneous gain distributions in neural networks I:The stationary case
by
Cordero Ceballos, Juan Carlos
,
Sanchez, Nestor E
,
Alejandro Jimenez Rodriguez
in
Computer simulation
,
Neural networks
,
Quantum mechanics
2017
We study heterogeneous distribution of gains in neural fields using techniques of quantum mechanics by exploiting a relationship of our model and the time-independent Schr\"{o}dinger equation. We show that specific relationships between the connectivity kernel and the gain of the population can explain the behavior of the neural field in simulations. In particular, we show this relationships for the gating of activity between two regions (step potential), the propagation of activity throughout another region (barrier) and, most importantly, the existence of bumps in gain-contained regions (gain well). Our results constitute specific predictions that can be tested in vivo or in vitro.
Expansion and contraction of resource allocation in sensory bottlenecks
by
Edmondson, Laura R
,
Saal, Hannes P
,
Alejandro Jiménez Rodríguez
in
Contraction
,
Information processing
,
Innervation
2021,2022
Topographic sensory representations often do not scale proportionally to the size of their input regions, with some expanded and others contracted. In vision, the foveal representation is magnified cortically, as are the fingertips in touch. What principles drive this allocation, and how should receptor density, e.g. the high innervation of the fovea or the fingertips, and stimulus statistics, e.g. the higher contact frequencies on the fingertips, contribute? Building on work in efficient coding, we address this problem using linear second-order models that maximize information transmission through decorrelation. We introduce a sensory bottleneck to impose constraints on resource allocation and derive the optimal neural allocation. We find that bottleneck width is a crucial factor in resource allocation, inducing either expansion or contraction. Both receptor density and stimulus statistics affect allocation and jointly determine convergence for wider bottlenecks. Furthermore, we show a close match between the predicted and empirical cortical allocations in a well-studied model system, the star-nosed mole. Overall, our results suggest that the strength of cortical magnification depends on resource limits. Competing Interest Statement The authors have declared no competing interest.