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157 result(s) for "Jobson, Richard"
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Nostalgia and the post-war Labour Party
This book shows that William Shakespeare was a more personal writer than any of his innumerable commentators have realised. It asserts that numerous characters and events were drawn from the author's life, and puts faces to the names of Jaques, Touchstone, Feste, Jessica, the 'Dark Lady' and others. Steven Sohmer explores aspects of Shakespeare's plays and sonnets that have been hitherto overlooked or misinterpreted in an effort to better understand the man and his work. If you've ever wondered who Pigrogromitus was, or why Jaques spies on Touchstone and Audrey - or what the famous riddle M.O.A.I. stands for - this is the book for you.
Molecular Phylogenomics Reveals the Deep Evolutionary History of Carnivory across Land Plants
Plastid molecular phylogenies that broadly sampled angiosperm lineages imply that carnivorous plants evolved at least 11 times independently in 13 families and 6 orders. Within and between these clades, the different prey capture strategies involving flypaper and pitfall structures arose in parallel with the subsequent evolution of snap traps and suction bladders. Attempts to discern the deep ontological history of carnivorous structures using multigene phylogenies have provided a plastid-level picture of sister relationships at the family level. Here, we present a molecular phylogeny of the angiosperms based on nuclear target sequence capture data (Angiosperms-353 probe set), assembled by the Kew Plant Trees of Life initiative, which aims to complete the tree of life for plants. This phylogeny encompasses all carnivorous and protocarnivorous families, although certain genera such as Philcoxia (Plantaginaceae) are excluded. This study offers a novel nuclear gene-based overview of relationships within and between carnivorous families and genera. Consistent with previous broadly sampled studies, we found that most carnivorous families are not affiliated with any single family. Instead, they emerge as sister groups to large clades comprising multiple non-carnivorous families. Additionally, we explore recent genomic studies across various carnivorous clades that examine the evolution of the carnivorous syndrome in relation to whole-genome duplication, subgenome dominance, small-scale gene duplication, and convergent evolution. Furthermore, we discuss insights into genome size evolution through the lens of carnivorous plant genomes.
Serial block face SEM visualization of unusual plant nuclear tubular extensions in a carnivorous plant (Utricularia, Lentibulariaceae)
In Utricularia nelumbifolia , the nuclei of placental nutritive tissue possess unusually shaped projections not known to occur in any other flowering plant. The main aim of the study was to document the morphology and ultrastructure of these unusual nuclei. In addition, the literature was searched to find examples of nuclear tubular projections in other plant groups, and the nuclei of closely related species of Utricularia (i.e. sects Iperua , Orchidioides , Foliosa and Utricularia ) were examined. To visualize the complexity of the nuclear structures, transmission electron microscopy (TEM) was used, and 3-D ultrastructural reconstructions were made using the serial block face scanning electron microscopy (SBEM) technique. The nuclei of 11 Utricularia species, i.e. U. nelumbifolia , U. reniformis , U. cornigera , U. nephrophylla (sect. Iperua ), U. asplundii , U. alpina , U. quelchii (sect. Orchidioides ), U. longifolia (sect. Foliosa ), U. intermedia , U. minor and U. gibba (sect. Utricularia ) were examined. Of the 11 Utricularia species examined, the spindle-like tubular projections (approx. 5 μm long) emanating from resident nuclei located in placental nutritive tissues were observed only in U. nelumbifolia . These tubular nuclear extensions contained chromatin distributed along hexagonally shaped tubules. The apices of the projections extended into the cell plasma membrane, and in many cases also made contact at the two opposing cellular poles, and with plasmodesmata via a short cisterna of the cortical endoplasmic reticulum. Images from the SBEM provide some evidence that the nuclear projections are making contact with those of neighbouring cells. The term chromatubules (chromatin-filled tubules) for the nuclear projections of U. nelumbifolia placental tissue was proposed here. Due to the apparent association with the plasma membrane and plasmodesmata, it was also speculated that chromatubules are involved in nucleus-cell-cell communication. However, further experimental evidence is required before any functional hypothesis can be entertained.
Nonflowering Land Plant Phylogeny Inferred from Nucleotide Sequences of Seven Chloroplast, Mitochondrial, and Nuclear Genes
Nucleotide sequences of seven chloroplast (atpBandrbcL, SSU and LSU rDNAs), mitochondrial (atp1, LSU rDNA), and nuclear (18S rDNA) genes from 192 land plants and their algal relatives were analyzed using maximum likelihood and maximum parsimony methods. Liverworts, mosses, hornworts, lycophytes, monilophytes (ferns), seed plants, and angiosperms all represent strongly supported monophyletic groups. Three bryophyte lineages form a paraphyletic group to vascular plants, with liverworts representing the sister to all other land plants and hornworts being sister to vascular plants. Lycophytes are sister to all other vascular plants, which are divided into two clades, one being monilophytes, which includeEquisetum, Psilotaceae‐Ophioglossaceae, Marattiaceae, and leptosporangiate ferns, and the other being seed plants. Relationships among the monilophyte lineages remain unresolved. Within seed plants, extant gymnosperms form a moderately supported clade in which Gnetales are related to conifers. This clade is sister to angiosperms. Most of the relationships among all major lineages of nonflowering land plants are supported by bootstrap values of 75% or higher, except those among basal monilophyte lineages and among some gymnosperm lineages, probably because of extinctions. The closest algal relative of land plants is Characeae, and this relationship is well supported. Several methodological issues on reconstructing large, deep phylogenies are also discussed.
An Evolutionary Genome Scan for Longevity-Related Natural Selection in Mammals
Aging is thought to occur through the accumulation of biochemical damage affecting DNA, proteins, and lipids. The major source of cellular damage involves the generation of reactive oxygen species produced during mitochondrial respiratory activity of the electron transport chain. Energetic metabolism, antioxidative processes, genome maintenance, and cell cycle are the cellular functions most commonly associated with aging, from experimental studies of model organisms. The significance of these experiments with respect to longevity-related selective constraints in nature remains unclear. Here we took a phylogenomic approach to identify the genetic targets of natural selection for elongated life span in mammals. By comparing the nonsynonymous and synonymous evolution of ∼5.7 million codon sites across 25 species, we identify codons and genes showing a stronger level of amino acid conservation in long-lived than in short-lived lineages. We show that genes involved in lipid composition and (collagen associated) vitamin C binding have collectively undergone increased selective pressure in long-lived species, whereas genes involved in DNA replication/repair or antioxidation have not. Most of the candidate genes experimentally associated with aging (e.g., PolG, Sod, Foxo) have played no detectable role in the evolution of longevity in mammals. A large body of current medical research aims at discovering how to increase longevity in human. In this study, we uncovered the way natural selection has completed this task during mammalian evolution. Cellular membrane and extracellular collagen composition, not genome integrity, have apparently been the optimized features.
Teaching Modern British Political History in a Politically Polarised and ‘Post-Truth’ Environment
This article assesses the challenges that university-level teachers of modern British political history currently face in what is often described as a ‘post-truth’ and polarised political environment. It argues that, whilst these challenges do not always present entirely new pedagogical considerations, the sociocultural and political terrain in Britain today requires careful navigation, particularly in an academic field which addresses recent historical topics that are routinely politicised and contested in contemporary discourse. Although there is a lack of scholarly literature on the topic of teaching modern British political history in a higher education setting, this article draws upon a wide array of educational studies to map out the contours of a successful pedagogical strategy that could facilitate ‘deep’ learning in the current contextual environment. To this end, it suggests that by utilising modern British political history's interdisciplinary foundations, applying teaching techniques that help students to explore topics from multiple viewpoints, devising new and stimulating interactive tasks, and capitalising on the opportunities afforded by the Internet age, learning can be enhanced and many of the more academically problematic features and characteristics of the current political climate can be counteracted.
Molecular Phylogeny of the Utricularia amethystina Complex (Utricularia sect. Foliosa) Assessed Using Plastid and Nuclear Sequence Data
Uncovering phylogenetic diversity is important, but not simple. A species complex is defined by different taxa with close evolutionary relationships harbouring limited morphological and/or genetic gaps. One such example exists within neotropical Utricularia sect. Foliosa, which is a taxonomically problematic assemblage composed of three currently recognized species: Utricularia amethystina. U. tricolor, and U. tridentata. The section type, Utricularia amethystina, contains 27 synonymized names. Morphological variation across the three species and associated synonyms suggests that previous taxonomic studies had underestimated taxonomic diversity. To examine taxonomic limits we sampled multiple accessions representing the three currently recognized species and many of the synonymized taxa classified under U. amethystina. We reconstructed a molecular phylogeny using three plastid regions (rps16, trnL-F, trnD-T) and nuclear ribosomal ITS. The three plastid markers produced similar phylogenetic topologies, and the combined plastid and nuclear phylogenies were congruent. The combined analysis provided strong support for most taxa previously identified through morphological analysis, also containing distinct groupings that likely represent both putative new species, and synonyms that are not monophyletic under the type accessions to which they had previously been relegated. The current analysis also shows a sister relationship between U. amethystina s. s. and U. tricolor, with U. tridentata found to be nested within the sister clade. Our results uncovered previously underestimated phylogenetic diversity within Utricularia sect. Foliosa, possibly driven by isolation factors such as specific phytophysiognomy across the varied habitats of the broad distribution across Central and South America.
carnivorous bladderwort (Utricularia, Lentibulariaceae): a system inflates
Carnivorous plants inhabit nutrient-poor environments, where prominent targets of prey capture are organic nitrogen and phosphorus. Some carnivorous plants also acquire carbon from their victims. A new report focusing on Utricularia, the bladderwort, demonstrates that carbon assimilated from photosynthesis is paradoxically secreted into the trapping environment, where it may help to support a mutualistic bacterial community. This bacterial community may also secrete allelochemicals that attract microcrustaceans which bear a strong overt resemblance to bladderwort traps. Furthermore, Utricularia and its sister genus Genlisea share anomalous molecular evolutionary features, such as highly increased rates of nucleotide substitution and dynamic evolution of genome size, from approximately 60-1500 megabases depending on the species or even population. A mechanistic hypothesis, based on the mutagenic action of reactive oxygen species (ROS) is proposed to underlie these phenomena, involving error-prone repair at the level of DNA bases and double-strand breaks. It is argued that these plants are prime candidates for further research on the complexities of plant physiology associated with carnivory, metagenomic surveys of trap microbial communities, novel plant nitrogen/nutrient utilization pathways, the ecology of prey attraction, whole-plant and trap comparative development, and, finally, evolution of the minimal angiosperm genome.
First molecular phylogenetic insights into the evolution of Eriocaulon (Eriocaulaceae, Poales)
Eriocaulon is a genus of c. 470 aquatic and wetland species of the monocot plant family Eriocaulaceae. It is widely distributed in Africa, Asia and America, with centres of species richness in the tropics. Most species of Eriocaulon grow in wetlands although some inhabit shallow rivers and streams with an apparent adaptive morphology of elongated submerged stems. In a previous molecular phylogenetic hypothesis, Eriocaulon was recovered as sister of the African endemic genus Mesanthemum. Several regional infrageneric classifications have been proposed for Eriocaulon. This study aims to critically assess the existing infrageneric classifications through phylogenetic reconstruction of infrageneric relationships, based on DNA sequence data of four chloroplast markers and one nuclear marker. There is little congruence between our molecular results and previous morphology-based infrageneric classifications. However, some similarities can be found, including Fyson’s sect. Leucantherae and Zhang’s sect. Apoda. Further phylogenetic studies, particularly focusing on less well sampled regions such as the Neotropics, will help provide a more global overview of the relationships in Eriocaulon and may enable suggesting the first global infrageneric classification.
Adaptive evolution of cytochrome c oxidase: infrastructure for a carnivorous plant radiation
Much recent attention in the study of adaptation of organismal form has centered on developmental regulation. As such, the highly conserved respiratory machinery of eukaryotic cells might seem an unlikely target for selection supporting novel morphologies. We demonstrate that a dramatic molecular evolutionary rate increase in subunit I of cytochrome c oxidase (COX) from an active-trapping lineage of carnivorous plants is caused by positive Darwinian selection. Bladderworts (Utricularia) trap plankton when water-immersed, negatively pressured suction bladders are triggered. The resetting of traps involves active ion transport, requiring considerable energy expenditure. As judged from the quaternary structure of bovine COX, the most profound adaptive substitutions are two contiguous cysteines absent in ≈99.9% of databased COX I sequences from Eukaryota, Archaea, and Bacteria. This motif lies directly at the docking point of COX I helix 3 and cytochrome c, and modeling of bovine COX I suggests the possibility of an unprecedented helix-terminating disulfide bridge that could alter COX/cytochrome c dissociation kinetics. Thus, the key adaptation in Utricularia likely lies in molecular energetic changes that buttressed the mechanisms responsible for the bladderworts' radical morphological evolution. Along with evidence for COX evolution underlying expansion of the anthropoid neocortex, our findings underscore that important morphological and physiological innovations must often be accompanied by specific adaptations in proteins with basic cellular functions.