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"Ke Deng"
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Fundamentals of Liquid Crystal Devices
by
Yang, Deng-Ke
,
Wu, Shin-Tson
in
Liquid crystal devices
,
Liquid crystal displays
,
Liquid crystals
2014
Liquid Crystal Devices are crucial and ubiquitous components of an ever-increasing number of technologies. They are used in everything from cellular phones, eBook readers, GPS devices, computer monitors and automotive displays to projectors and TVs, to name but a few. This second edition continues to serve as an introductory guide to the fundamental properties of liquid crystals and their technical application, while explicating the recent advancements within LCD technology. This edition includes important new chapters on blue-phase display technology, advancements in LCD research significantly contributed to by the authors themselves.
This title is of particular interest to engineers and researchers involved in display technology and graduate students involved in display technology research.
* Key features:
Updated throughout to reflect the latest technical state-of-the-art in LCD research and development, including new chapters and material on topics such as the properties of blue-phase liquid crystal displays and 3D liquid crystal displays;
* Explains the link between the fundamental scientific principles behind liquid crystal technology and their application to photonic devices and displays, providing a thorough understanding of the physics, optics, electro-optics and material aspects of Liquid Crystal Devices;
* Revised material reflecting developments in LCD technology, including updates on optical modelling methods, transmissive LCDs and tunable liquid crystal photonic devices;
* Chapters conclude with detailed homework problems to further cement an understanding of the topic.
Research on simulation system of landscape art design based on computer learning and virtual reality technology
2025
The increasing growth of urbanization has created significant prospects for the advancement of architectural landscape design. However, the existing machine learning and image processing methods provide partial solutions, because they struggle with noise, overlapping landscape features, and poor segmentation accuracy. To address these limitations, we propose a hybrid simulation and classification model that integrates the advantages of computer learning with immersive virtual reality (VR) environments. First, wavelet-based denoising and intensity normalization are applied to enhance 360° landscape image quality. A multi-orientation segmentation method is then used to accurately classify the complex visual features. Texture features are extracted using a combination of Grey Level Co-occurrence Matrix (GLCM) and Bayesian-optimized Gauss Markov Random Field (GMRF), which helps to capture both spatial and statistical relationships. These features are classified using a hybrid approach combining logistic regression (LR) and K-nearest neighbor (KNN), which allows strong observation of landscape features. Simulation of the model is conducted using real world immersive VR studies. The experiments demonstrate the superiority of the model in terms of accuracy (98%), precision (99.5%), and sensitivity (98.5%), respectively.
Journal Article
A positive correlation between GC content and growth temperature in prokaryotes
by
Gao, Jie
,
Niu, Deng-Ke
,
Lan, Xin-Ran
in
Animal Genetics and Genomics
,
Archaea
,
Archaea - genetics
2022
Background
GC pairs are generally more stable than AT pairs; GC-rich genomes were proposed to be more adapted to high temperatures than AT-rich genomes. Previous studies consistently showed positive correlations between growth temperature and the GC contents of structural RNA genes. However, for the whole genome sequences and the silent sites of the codons in protein-coding genes, the relationship between GC content and growth temperature is in a long-lasting debate.
Results
With a dataset much larger than previous studies (681 bacteria and 155 archaea with completely assembled genomes), our phylogenetic comparative analyses showed positive correlations between optimal growth temperature (Topt) and GC content both in bacterial and archaeal structural RNA genes and in bacterial whole genome sequences, chromosomal sequences, plasmid sequences, core genes, and accessory genes. However, in the 155 archaea, we did not observe a significant positive correlation of Topt with whole-genome GC content (GC
w
) or GC content at four-fold degenerate sites. We randomly drew 155 samples from the 681 bacteria for 1000 rounds. In most cases (> 95%), the positive correlations between Topt and genomic GC contents became statistically nonsignificant (
P
> 0.05). This result suggested that the small sample sizes might account for the lack of positive correlations between growth temperature and genomic GC content in the 155 archaea and the bacterial samples of previous studies. Comparing the GC content among four categories (psychrophiles/psychrotrophiles, mesophiles, thermophiles, and hyperthermophiles) also revealed a positive correlation between GC
w
and growth temperature in bacteria. By including the GC
w
of incompletely assembled genomes, we expanded the sample size of archaea to 303. Positive correlations between GC
w
and Topt appear especially after excluding the halophilic archaea whose GC contents might be strongly shaped by intense UV radiation.
Conclusions
This study explains the previous contradictory observations and ends a long debate. Prokaryotes growing in high temperatures have higher GC contents. Thermal adaptation is one possible explanation for the positive association. Meanwhile, we propose that the elevated efficiency of DNA repair in response to heat mutagenesis might have the by-product of increasing GC content like that happens in intracellular symbionts and marine bacterioplankton.
Journal Article
The molecular regulatory mechanisms of meiotic arrest and resumption in Oocyte development and maturation
2023
In human female primordial germ cells, the transition from mitosis to meiosis begins from the fetal stage. In germ cells, meiosis is arrested at the diplotene stage of prophase in meiosis I (MI) after synapsis and recombination of homologous chromosomes, which cannot be segregated. Within the follicle, the maintenance of oocyte meiotic arrest is primarily attributed to high cytoplasmic concentrations of cyclic adenosine monophosphate (cAMP). Depending on the specific species, oocytes can remain arrested for extended periods of time, ranging from months to even years. During estrus phase in animals or the menstrual cycle in humans, the resumption of meiosis occurs in certain oocytes due to a surge of luteinizing hormone (LH) levels. Any factor interfering with this process may lead to impaired oocyte maturation, which in turn affects female reproductive function. Nevertheless, the precise molecular mechanisms underlying this phenomenon has not been systematically summarized yet. To provide a comprehensive understanding of the recently uncovered regulatory network involved in oocyte development and maturation, the progress of the cellular and molecular mechanisms of oocyte nuclear maturation including meiosis arrest and meiosis resumption is summarized. Additionally, the advancements in understanding the molecular cytoplasmic events occurring in oocytes, such as maternal mRNA degradation, posttranslational regulation, and organelle distribution associated with the quality of oocyte maturation, are reviewed. Therefore, understanding the pathways regulating oocyte meiotic arrest and resumption will provide detailed insight into female reproductive system and provide a theoretical basis for further research and potential approaches for novel disease treatments.
Journal Article
Experimental observation of topological Fermi arcs in type-II Weyl semimetal MoTe2
2016
Observations of topological surface states provide strong evidence that MoTe
2
is a type-II Weyl semimetal, hosting Weyl fermions that have no counterpart in high-energy physics.
Weyl semimetal is a new quantum state of matter
1
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2
,
3
,
4
,
5
,
6
,
7
,
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,
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,
10
,
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hosting the condensed matter physics counterpart of the relativistic Weyl fermions
13
originally introduced in high-energy physics. The Weyl semimetal phase realized in the TaAs class of materials features multiple Fermi arcs arising from topological surface states
10
,
11
,
14
,
15
,
16
and exhibits novel quantum phenomena, such as a chiral anomaly-induced negative magnetoresistance
17
,
18
,
19
and possibly emergent supersymmetry
20
. Recently it was proposed theoretically that a new type (type-II) of Weyl fermion
21
,
22
that arises due to the breaking of Lorentz invariance, which does not have a counterpart in high-energy physics, can emerge as topologically protected touching between electron and hole pockets. Here, we report direct experimental evidence of topological Fermi arcs in the predicted type-II Weyl semimetal MoTe
2
(refs
23
,
24
,
25
). The topological surface states are confirmed by directly observing the surface states using bulk- and surface-sensitive angle-resolved photoemission spectroscopy, and the quasi-particle interference pattern between the putative topological Fermi arcs in scanning tunnelling microscopy. By establishing MoTe
2
as an experimental realization of a type-II Weyl semimetal, our work opens up opportunities for probing the physical properties of this exciting new state.
Journal Article
The long noncoding RNA Chaer defines an epigenetic checkpoint in cardiac hypertrophy
2016
The lncRNA
Chaer
controls hypertrophic heart growth by binding to and interfering with the function of the epigenetic regulator PRC2.
Epigenetic reprogramming is a critical process of pathological gene induction during cardiac hypertrophy and remodeling, but the underlying regulatory mechanisms remain to be elucidated. Here we identified a heart-enriched long noncoding (lnc)RNA, named cardiac-hypertrophy-associated epigenetic regulator (
Chaer
), which is necessary for the development of cardiac hypertrophy. Mechanistically,
Chaer
directly interacts with the catalytic subunit of polycomb repressor complex 2 (PRC2). This interaction, which is mediated by a 66-mer motif in
Chaer
, interferes with PRC2 targeting to genomic loci, thereby inhibiting histone H3 lysine 27 methylation at the promoter regions of genes involved in cardiac hypertrophy. The interaction between
Chaer
and PRC2 is transiently induced after hormone or stress stimulation in a process involving mammalian target of rapamycin complex 1, and this interaction is a prerequisite for epigenetic reprogramming and induction of genes involved in hypertrophy. Inhibition of
Chaer
expression in the heart before, but not after, the onset of pressure overload substantially attenuates cardiac hypertrophy and dysfunction. Our study reveals that stress-induced pathological gene activation in the heart requires a previously uncharacterized lncRNA-dependent epigenetic checkpoint.
Journal Article
Effects of SGLT2 inhibitors on UTIs and genital infections in type 2 diabetes mellitus: a systematic review and meta-analysis
2017
Previous trial evidence suggested potential risk of serious urinary tract infections (UTIs) and genital infections in type 2 diabetes patients using sodium glucose co-transporter-2 inhibitors (SGLT2) inhibitors. We conducted a systematic review and meta-analysis to assess the effects of SGLT2 inhibitors on UTIs and genital infections in patients with type 2 diabetes. In total, 77 RCTs involving 50,820 participants were eligible. The meta-analyses of randomized controlled trials (RCTs) showed no significant difference in UTIs between SGLT2 inhibitors versus control (2,526/29,086 vs. 1,278/14,940; risk ratio (RR) 1.05, 95% confidence interval (CI) 0.98 to 1.12; moderate quality evidence), but suggested increased risk of genital infections with SGLT2 inhibitors (1,521/24,017 vs. 216/12,552; RR 3.30, 95% CI 2.74 to 3.99; moderate quality evidence). Subgroup analyses by length of follow up (interaction p = 0.005), type of control (interaction p = 0.04) and individual SGLT2 inhibitors (interaction p = 0.03) also showed statistically significant differences in genital infections. The upcoming major trials may provide important additional insights on UTIs, and more efforts are needed to address comparative effects of each individual SGLT2 inhibitors on the infections.
Journal Article
Silencing of long noncoding RNA PVT1 inhibits podocyte damage and apoptosis in diabetic nephropathy by upregulating FOXA1
2019
The number of patients with diabetic nephropathy (DN) is still on the rise worldwide, and this requires the development of new therapeutic strategies. Recent reports have highlighted genetic factors in the treatment of DN. Herein, we aimed to study the roles of long noncoding RNA (lncRNA) plasmacytoma variant translocation 1 (PVT1) and histone 3 lysine 27 trimethylation (H3K27me3) in DN. A model of DN was established by inducing diabetes in mice with streptozotocin. Mouse podocyte clone 5 (MPC5) podocytes and primary podocytes were cultured in normal and high glucose media to observe cell morphology and to quantify PVT1 expression. The roles of PVT1 and enhancer of zeste homolog 2 (EZH2) were validated via loss-of-function and gain-of-function in vitro experiments to identify the interactions among PVT1, EZH2, and forkhead box A1 (FOXA1). The podocyte damage and apoptosis due to PVT1 and FOXA1 were verified with in vivo experiments. PVT1 was highly expressed in MPC5 and primary podocytes in DN patients and in cultures grown in high glucose medium. A large number of CpG (C-phosphate-G) island sites were predicted at the FOXA1 promoter region, where PVT1 recruited EZH2 to promote the recruitment of H3K27me3. The silencing of PVT1 or the overexpression of FOXA1 relieved the damage and inhibited the apoptosis of podocytes in DN, as was evidenced by the upregulated expression of synaptopodin and podocin, higher expression of Bcl-2, and lower expression of Bax and cleaved caspase-3. The key findings of this study collectively indicate that the suppression of lncRNA PVT1 exerts inhibitory effects on podocyte damage and apoptosis via FOXA1 in DN, which is of clinical significance.
Diabetic kidney disease: Improving treatment by targeting an RNA molecule
Targeting an RNA molecule responsible for disrupting metabolic protein levels in diabetic kidney disease may improve treatment. Diabetic nephropathy (DN) can affect people with type I or type II diabetes, and results in functional deterioration and the need for regular dialysis. DN incidence is rising worldwide, but existing treatments are only partially effective. Zhang-Suo Liu at Zhengzhou University, China, and co-workers examined the role of a long noncoding RNA molecule known as PVT1, which has been recently associated with kidney disease. The team collected serum samples from 32 patients with DN, and also generated a DN mouse model. They found that PVT1 expression was significantly higher in DN, and that this inhibited the expression of a key metabolic protein, FOXA1. Silencing PVT1 restored FOXA1 levels, limiting damage and cell death in kidney cells.
Journal Article
Human amniotic mesenchymal stem cells inhibit hepatocellular carcinoma in tumour‐bearing mice
by
Liu, Qian‐Yu
,
Zhang, Wen‐Jie
,
Liu, Yu
in
1-Phosphatidylinositol 3-kinase
,
Adaptor Proteins, Signal Transducing - antagonists & inhibitors
,
Adaptor Proteins, Signal Transducing - genetics
2020
Hepatocellular carcinoma (HCC) is the third leading cause of the cancer‐related death in the world. Human amniotic mesenchymal stem cells (hAMSCs) have been characterized with a pluripotency, low immunogenicity and no tumorigenicity. Especially, the immunosuppressive and anti‐inflammatory effects of hAMSCs make them suitable for treating HCC. Here, we reported that hAMSCs administrated by intravenous injection significantly inhibited HCC through suppressing cell proliferation and inducing cell apoptosis in tumour‐bearing mice with Hepg2 cells. Cell tracking experiments with GFP‐labelled hAMSCs showed that the stem cells possessed the ability of migrating to the tumorigenic sites for suppressing tumour growth. Importantly, both hAMSCs and the conditional media (hAMSC‐CM) have the similar antitumour effects in vitro, suggesting that hAMSCs‐derived cytokines might be involved in their antitumour effects. Antibody array assay showed that hAMSCs highly expressed dickkopf‐3 (DKK‐3), dickkopf‐1 (DKK‐1) and insulin‐like growth factor‐binding protein 3 (IGFBP‐3). Furthermore, the antitumour effects of hAMSCs were further confirmed by applications of the antibodies or the specific siRNAs of DKK‐3, DKK‐1 and IGFBP‐3 in vitro. Mechanically, hAMSCs‐derived DKK‐3, DKK‐1 and IGFBP‐3 markedly inhibited cell proliferation and promoted apoptosis of Hepg2 cells through suppressing the Wnt/β‐catenin signalling pathway and IGF‐1R‐mediated PI3K/AKT signalling pathway, respectively. Taken together, our study demonstrated that hAMSCs possess significant antitumour effects in vivo and in vitro and might provide a novel strategy for HCC treatment clinically.
Journal Article
Lorentz-violating type-II Dirac fermions in transition metal dichalcogenide PtTe2
2017
Topological semimetals have recently attracted extensive research interests as host materials to condensed matter physics counterparts of Dirac and Weyl fermions originally proposed in high energy physics. Although Lorentz invariance is required in high energy physics, it is not necessarily obeyed in condensed matter physics, and thus Lorentz-violating type-II Weyl/Dirac fermions could be realized in topological semimetals. The recent realization of type-II Weyl fermions raises the question whether their spin-degenerate counterpart—type-II Dirac fermions—can be experimentally realized too. Here, we report the experimental evidence of type-II Dirac fermions in bulk stoichiometric PtTe
2
single crystal. Angle-resolved photoemission spectroscopy measurements and first-principles calculations reveal a pair of strongly tilted Dirac cones along the Γ-A direction, confirming PtTe
2
as a type-II Dirac semimetal. Our results provide opportunities for investigating novel quantum phenomena (e.g., anisotropic magneto-transport) and topological phase transition.
Whether the spin-degenerate counterpart of Lorentz-violating Weyl fermions, the Dirac fermions, can be realized remains as an open question. Here, Yan et al. report experimental evidence of such type-II Dirac fermions in bulk PtTe
2
single crystal with a pair of strongly tilted Dirac cones.
Journal Article