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result(s) for
"Kim, Minjoo"
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Intraoperative vascular mapping improves patient eligibility for arteriovenous fistula creation
by
Taubenfeld, Ella
,
Silpe, Jeffrey
,
Etkin, Yana
in
Arteriovenous Fistula - surgery
,
Arteriovenous fistula maturation
,
Arteriovenous Shunt, Surgical
2023
We assessed the utility of intraoperative vein mapping performed by the operating surgeon for evaluating vessel suitability for arteriovenous fistula (AVF) creation.
In a retrospective review of 222 AVFs, vein diameter measurements were compared between intraoperative and preoperative mapping in the same anatomical location. AVF creation was based on intraoperative vein diameter ≥2 mm, using a distal to proximal and superficial veins first approach. Potential selection of access type based on preoperative findings alone was analyzed.
The mean diameter of the veins used for AVF creation measured 3.6 ± 0.8 mm on intraoperative duplex versus 2.5 ± 0.9 mm when the same veins were measured on preoperative duplex. Based on preoperative mapping alone, 23% of patients would have received a more proximal AVF and 5% would have needed a graft. AVFs created more distally based on intraoperative findings had similar maturation rates compared to the rest of the cohort, 79% versus 84% (p = 0.2).
Intraoperative vein mapping can be used to evaluate vessel suitability for AVF and compared to pre-operative vein mapping may increase the eligibility of distal veins for fistula creation while reducing the need for AV grafts.
•Diameter of veins used for AVF creation measured larger on intra versus preoperative mapping.•Assessing veins via intraoperative mapping leads to more distal AVF creation.•Utilizing intraoperative vein mapping does not compromise AVF maturation results.
Journal Article
Image processing with Optical matrix vector multipliers implemented for encoding and decoding tasks
by
Kim, Minjoo
,
Kim, Yelim
,
Park, Won Il
in
639/624/1075/401
,
639/624/1107/510
,
Data compression
2025
This study introduces an optical neural network (ONN)-based autoencoder for efficient image processing, utilizing specialized optical matrix-vector multipliers for both encoding and decoding tasks. To address the challenges in efficient decoding, we propose a method that optimizes output processing through scalar multiplications, enhancing performance in generating higher-dimensional outputs. By employing on-system iterative tuning, we mitigate hardware imperfections and noise, progressively improving image reconstruction accuracy to near-digital quality. Furthermore, our approach supports noise reduction and optical image generation, enabling models such as denoising autoencoders, variational autoencoders, and generative adversarial networks. Our results demonstrate that ONN-based systems have the potential to surpass the energy efficiency of traditional electronic systems, enabling real-time, low-power image processing in applications such as medical imaging, autonomous vehicles, and edge computing.
Journal Article
Impact of state-of-charge and temperature on the cross-plane thermal conductivity of a Li-ion pouch cell
2025
A thorough understanding of the thermal transport characteristics of Li-ion batteries is critical for the development of accurate thermal models and the enhancement of thermal management strategies. In this study, the cross-plane thermal conductivity (
k
⊥
) of a commercial 20 Ah Li-ion pouch cell was systematically measured across a broad range of state-of-charge (SOC) levels and temperatures (20.6 to 43.3
∘
C) using a custom-designed guarded hot plate apparatus. The results indicate that at room temperature (27.3
∘
C),
k
⊥
decreases with increasing SOC, reaching a minimum near
SOC
=
80
%
, followed by a marked increase at
SOC
=
100
%
. Furthermore, at
SOC
=
100
\\%
,
k
⊥
increased by approximately 0.188
Wm
-
1
K
-
1
(80% enhancement) as the temperature rose from 20.6 to 43.3
∘
C. The observation shows that
k
⊥
consistently increases with temperature across all SOC levels, exhibiting nearly consistent slopes. To elucidate these trends, various contributing factors were systematically examined.
Journal Article
Fermentation profiling of rice wine produced by Aspergillus oryzae KSS2 and Rhizopus oryzae KJJ39 newly isolated from Korean fermentation starter
2021
The objective of this study was to determine the fermentation characteristics of rice wine produced by
koji
inoculated with
Aspergillus oryzae
KSS2 and
Rhizopus oryzae
KJJ39 on moisturized wheat-bran and rice grain. We also compared rice wine samples produced in this study and three commercial
Makgeolli
. The alcohol content was about 12% higher in the rice wine samples fermented by wheat-bran
koji
than in the other samples. In all of the samples, the range of pH value was 3.8–4.6 and the total acid was below 0.5. The soluble solid content was highest in the rice wine sample prepared by the wheat-bran
R
.
oryzae
KJJ39
koji
(15.5°Brix) and overall relatively higher in the samples with wheat-bran
koji
than rice
koji
. The content of reducing sugar was twofold higher in rice wine prepared by
koji
inoculated with
R
.
oryzae
KJJ39 than
A
.
oryzae
KSS2. The volatile acid content was higher in rice wine produced by the wheat-bran
A
.
oryzae
KSS2
koji
than the others. In the analyses of five organic acids,
A
.
oryzae
KSS2 was found to produce more malic acid and fumaric acid while
R
.
oryzae
KJJ39 to do more citric acid, lactic acid and acetic acid. The rice wine sample prepared with the wheat-bran
A
.
oryzae
KSS2
koji
contained much higher concentration of sucrose, maltose and amino acids. Comprehensively, the results of fermentation profiling suggest that both
A
.
oryzae
KSS2 and
R
.
oryzae
KJJ39 can be applied to the production of rice wine as a valuable fungal isolate for fermentation start.
Journal Article
Anti-Obesity and Anti-Adipogenic Effects of Chitosan Oligosaccharide (GO2KA1) in SD Rats and in 3T3-L1 Preadipocytes Models
by
Oh, Jungbae
,
Kwon, Young-In
,
Lee, Jung-Yun
in
3T3-L1 cell
,
3T3-L1 Cells
,
adipocyte differentiations
2021
Excess body weight is a major risk factor for type 2 diabetes (T2D) and associated metabolic complications, and weight loss has been shown to improve glycemic control and decrease morbidity and mortality in T2D patients. Weight-loss strategies using dietary interventions produce a significant decrease in diabetes-related metabolic disturbance. We have previously reported that the supplementation of low molecular chitosan oligosaccharide (GO2KA1) significantly inhibited blood glucose levels in both animals and humans. However, the effect of GO2KA1 on obesity still remains unclear. The aim of the study was to evaluate the anti-obesity effect of GO2KA1 on lipid accumulation and adipogenic gene expression using 3T3-L1 adipocytes in vitro and plasma lipid profiles using a Sprague-Dawley (SD) rat model. Murine 3T3-L1 preadipocytes were stimulated to differentiate under the adipogenic stimulation in the presence and absence of varying concentrations of GO2KA1. Adipocyte differentiation was confirmed by Oil Red O staining of lipids and the expression of adipogenic gene expression. Compared to control group, the cells treated with GO2KA1 significantly decreased in intracellular lipid accumulation with concomitant decreases in the expression of key transcription factors, peroxisome proliferator-activated receptor gamma (PPARγ) and CCAAT/enhancer-binding protein alpha (CEBP/α). Consistently, the mRNA expression of downstream adipogenic target genes such as fatty acid binding protein 4 (FABP4), fatty acid synthase (FAS), were significantly lower in the GO2KA1-treated group than in the control group. In vivo, male SD rats were fed a high fat diet (HFD) for 6 weeks to induced obesity, followed by oral administration of GO2KA1 at 0.1 g/kg/body weight or vehicle control in HFD. We assessed body weight, food intake, plasma lipids, levels of alanine aminotransferase (ALT) and aspartate aminotransferase (AST) for liver function, and serum level of adiponectin, a marker for obesity-mediated metabolic syndrome. Compared to control group GO2KA1 significantly suppressed body weight gain (185.8 ± 8.8 g vs. 211.6 ± 20.1 g, p < 0.05) with no significant difference in food intake. The serum total cholesterol, triglyceride, and low-density lipoprotein (LDL) levels were significantly lower in the GO2KA1-treated group than in the control group, whereas the high-density lipoprotein (HDL) level was higher in the GO2KA1 group. The GO2KA1-treated group also showed a significant reduction in ALT and AST levels compared to the control. Moreover, serum adiponectin levels were significantly 1.5-folder higher than the control group. These in vivo and in vitro findings suggest that dietary supplementation of GO2KA1 may prevent diet-induced weight gain and the anti-obesity effect is mediated in part by inhibiting adipogenesis and increasing adiponectin level.
Journal Article
Enriching plausible new hypothesis generation in PubMed
2017
Most of earlier studies in the field of literature-based discovery have adopted Swanson's ABC model that links pieces of knowledge entailed in disjoint literatures. However, the issue concerning their practicability remains to be solved since most of them did not deal with the context surrounding the discovered associations and usually not accompanied with clinical confirmation. In this study, we aim to propose a method that expands and elaborates the existing hypothesis by advanced text mining techniques for capturing contexts. We extend ABC model to allow for multiple B terms with various biological types.
We were able to concretize a specific, metabolite-related hypothesis with abundant contextual information by using the proposed method. Starting from explaining the relationship between lactosylceramide and arterial stiffness, the hypothesis was extended to suggest a potential pathway consisting of lactosylceramide, nitric oxide, malondialdehyde, and arterial stiffness. The experiment by domain experts showed that it is clinically valid.
The proposed method is designed to provide plausible candidates of the concretized hypothesis, which are based on extracted heterogeneous entities and detailed relation information, along with a reliable ranking criterion. Statistical tests collaboratively conducted with biomedical experts provide the validity and practical usefulness of the method unlike previous studies. Applying the proposed method to other cases, it would be helpful for biologists to support the existing hypothesis and easily expect the logical process within it.
Journal Article
Evidence that the TRPV1 S1-S4 membrane domain contributes to thermosensing
2020
Sensing and responding to temperature is crucial in biology. The TRPV1 ion channel is a well-studied heat-sensing receptor that is also activated by vanilloid compounds, including capsaicin. Despite significant interest, the molecular underpinnings of thermosensing have remained elusive. The TRPV1 S1-S4 membrane domain couples chemical ligand binding to the pore domain during channel gating. Here we show that the S1-S4 domain also significantly contributes to thermosensing and couples to heat-activated gating. Evaluation of the isolated human TRPV1 S1-S4 domain by solution NMR, far-UV CD, and intrinsic fluorescence shows that this domain undergoes a non-denaturing temperature-dependent transition with a high thermosensitivity. Further NMR characterization of the temperature-dependent conformational changes suggests the contribution of the S1-S4 domain to thermosensing shares features with known coupling mechanisms between this domain with ligand and pH activation. Taken together, this study shows that the TRPV1 S1-S4 domain contributes to TRPV1 temperature-dependent activation.
The TRPV1 ion channel is a heat-sensing receptor that is also activated by vanilloid compounds, but the molecular underpinnings of thermosensing have remained elusive. Here authors use in solution NMR on the isolated human TRPV1 S1-S4 domain and show that this domain undergoes a non-denaturing temperature-dependent transition with a high thermosensitivity.
Journal Article
Early Prediction for Prediabetes and Type 2 Diabetes Using the Genetic Risk Score and Oxidative Stress Score
2022
We aimed to use a genetic risk score (GRS) constructed with prediabetes and type 2 diabetes-related single nucleotide polymorphisms (SNPs) and an oxidative stress score (OSS) to construct an early-prediction model for prediabetes and type 2 diabetes (T2DM) incidence in a Korean population. The study population included 549 prediabetes and T2DM patients and 1036 normal subjects. The GRS was constructed using six prediabetes and T2DM-related SNPs, and the OSS was composed of three recognized oxidative stress biomarkers. Among the nine SNPs, six showed significant associations with the incidence of prediabetes and T2DM. The GRS was profoundly associated with increased prediabetes and T2DM (OR = 1.946) compared with individual SNPs after adjusting for age, sex, and BMI. Each of the three oxidative stress biomarkers was markedly higher in the prediabetes and T2DM group than in the normal group, and the OSS was significantly associated with increased prediabetes and T2DM (OR = 2.270). When BMI was introduced to the model with the OSS and GRS, the area under the ROC curve improved (from 69.3% to 70.5%). We found that the prediction model composed of the OSS, GRS, and BMI showed a significant prediction ability for the incidence of prediabetes and T2DM.
Journal Article
Metabolomics identifies increases in the acylcarnitine profiles in the plasma of overweight subjects in response to mild weight loss: a randomized, controlled design study
2018
Background
Using metabolomics technique to analyze the response to a dietary intervention generates valuable information concerning the effects of the prescribed diet on metabolic regulation. To determine whether low calorie diet (LCD)-induced weight reduction causes changes in plasma metabolites and metabolic characteristics.
Methods
Overweight subjects consumed a LCD (
n
= 47) or a weight maintenance diet (control,
n
= 50) in a randomized, controlled design study with a 12-week clinical intervention period. Plasma samples were analyzed using an UPLC-LTQ-Orbitrap MS.
Results
The 12-week LCD intervention resulted in significant mild weight loss, with an 8.3% and 10.6% reduction observed in the visceral fat area (VFA) at the level of the lumbar vertebrae L1 and L4, respectively. The LCD group showed a significant increase in the mean change of serum free fatty acids compared to the control group. In the LCD group, we observed a significant increase in the acylcarnitine (AC) levels, including hexanoylcarnitine, L-octanoylcarnitine, 9-decenoylcarnitine, trans-2-dodecenoylcanitine, dodecanoylcarnitine, 3,5-tetradecadiencarnitine, cis-5-tetradecenoylcarnitine, 9,12-hexadecadienoylcarnitine, and 9-hexadecenoylcarnitne at the 12-week follow-up assessment. When the plasma metabolite changes from baseline were compared between the control and LCD groups, the LCD group showed significant increases in hexanoylcarnitine, L-octanoylcarnitine, trans-2-dodecenoylcanitine, and 3,5-tetradecadiencarnitine than the control group. Additionally, the changes in these ACs in the LCD group strongly negatively correlated with the changes in the VFA at L1 and/or L4.
Conclusion
Mild weight loss from 12-week calorie restriction increased the plasma levels of medium- and long-chain ACs. These changes were coupled with a decrease in VFA and an increase in free fatty acids.
Trial registration
NCT03135132
; April 26, 2017.
Journal Article
Mussel-inspired polydopamine decorated alginate dialdehyde-gelatin 3D printed scaffolds for bone tissue engineering application
by
Monavari, Mahshid
,
Ghalandari, Behafarid
,
Boccaccini, Aldo R.
in
3-D printers
,
alginate dialdehyde-gelatin
,
Alginic acid
2022
This study utilized extrusion-based 3D printing technology to fabricate calcium-cross-linked alginate dialdehyde-gelatin scaffolds for bone regeneration. The surface of polymeric constructs was modified with mussel-derived polydopamine (PDA) in order to induce biomineralization, increase hydrophilicity, and enhance cell interactions. Microscopic observations revealed that the PDA layer homogeneously coated the surface and did not appear to induce any distinct change in the microstructure of the scaffolds. The PDA-functionalized scaffolds were more mechanically stable (compression strength of 0.69 ± 0.02 MPa) and hydrophilic (contact angle of 26) than non-modified scaffolds. PDA-decorated ADA-GEL scaffolds demonstrated greater durability. As result of the 18-days immersion in simulated body fluid solution, the PDA-coated scaffolds showed satisfactory biomineralization. Based on theoretical energy analysis, it was shown that the scaffolds coated with PDA interact spontaneously with osteocalcin and osteomodulin (binding energy values of −35.95 kJ mol −1 and −46.39 kJ mol −1 , respectively), resulting in the formation of a protein layer on the surface, suggesting applications in bone repair. PDA-coated ADA-GEL scaffolds are capable of supporting osteosarcoma MG-63 cell adhesion, viability (140.18% after 7 days), and proliferation. In addition to increased alkaline phosphatase secretion, osteoimage intensity also increased, indicating that the scaffolds could potentially induce bone regeneration. As a consequence, the present results confirm that 3D printed PDA-coated scaffolds constitute an intriguing novel approach for bone tissue engineering.
Journal Article