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"Kokaly, Raymond"
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Evaluation of SWIR Crop Residue Bands for the Landsat Next Mission
by
Wu, Zhuoting
,
Lamb, Brian T.
,
Daughtry, Craig S. T.
in
Absorption
,
Accuracy
,
Agricultural land
2021
This research reports the findings of a Landsat Next expert review panel that evaluated the use of narrow shortwave infrared (SWIR) reflectance bands to measure ligno-cellulose absorption features centered near 2100 and 2300 nm, with the objective of measuring and mapping non-photosynthetic vegetation (NPV), crop residue cover, and the adoption of conservation tillage practices within agricultural landscapes. Results could also apply to detection of NPV in pasture, grazing lands, and non-agricultural settings. Currently, there are no satellite data sources that provide narrowband or hyperspectral SWIR imagery at sufficient volume to map NPV at a regional scale. The Landsat Next mission, currently under design and expected to launch in the late 2020’s, provides the opportunity for achieving increased SWIR sampling and spectral resolution with the adoption of new sensor technology. This study employed hyperspectral data collected from 916 agricultural field locations with varying fractional NPV, fractional green vegetation, and surface moisture contents. These spectra were processed to generate narrow bands with centers at 2040, 2100, 2210, 2260, and 2230 nm, at various bandwidths, that were subsequently used to derive 13 NPV spectral indices from each spectrum. For crop residues with minimal green vegetation cover, two-band indices derived from 2210 and 2260 nm bands were top performers for measuring NPV (R^(2) = 0.81, RMSE = 0.13) using bandwidths of 30 to 50 nm, and the addition of a third band at 2100 nm increased resistance to atmospheric correction residuals and improved mission continuity with Landsat 8 Operational Land Imager Band 7. For prediction of NPV over a full range of green vegetation cover, the Cellulose Absorption Index, derived from 2040, 2100, and 2210 nm bands, was top performer (R^(2) = 0.77, RMSE = 0.17), but required a narrow (≤20 nm) bandwidth at 2040 nm to avoid interference from atmospheric carbon dioxide absorption. In comparison, broadband NPV indices utilizing Landsat 8 bands centered at 1610 and 2200 nm performed poorly in measuring fractional NPV (R^(2) = 0.44), with significantly increased interference from green vegetation
Journal Article
Detection of Salt Marsh Vegetation Stress and Recovery after the Deepwater Horizon Oil Spill in Barataria Bay, Gulf of Mexico Using AVIRIS Data
by
Roberts, Dar A.
,
Ustin, Susan L.
,
Koltunov, Alexander
in
Adaptation, Physiological
,
AVIRIS
,
Bays
2013
The British Petroleum Deepwater Horizon Oil Spill in the Gulf of Mexico was the biggest oil spill in US history. To assess the impact of the oil spill on the saltmarsh plant community, we examined Advanced Visible Infrared Imaging Spectrometer (AVIRIS) data flown over Barataria Bay, Louisiana in September 2010 and August 2011. Oil contamination was mapped using oil absorption features in pixel spectra and used to examine impact of oil along the oiled shorelines. Results showed that vegetation stress was restricted to the tidal zone extending 14 m inland from the shoreline in September 2010. Four indexes of plant stress and three indexes of canopy water content all consistently showed that stress was highest in pixels next to the shoreline and decreased with increasing distance from the shoreline. Index values along the oiled shoreline were significantly lower than those along the oil-free shoreline. Regression of index values with respect to distance from oil showed that in 2011, index values were no longer correlated with proximity to oil suggesting that the marsh was on its way to recovery. Change detection between the two dates showed that areas denuded of vegetation after the oil impact experienced varying degrees of re-vegetation in the following year. This recovery was poorest in the first three pixels adjacent to the shoreline. This study illustrates the usefulness of high spatial resolution airborne imaging spectroscopy to map actual locations where oil from the spill reached the shore and then to assess its impacts on the plant community. We demonstrate that post-oiling trends in terms of plant health and mortality could be detected and monitored, including recovery of these saltmarsh meadows one year after the oil spill.
Journal Article
Oiling accelerates loss of salt marshes, southeastern Louisiana
by
Roberts, Dar A.
,
Peterson, Seth H.
,
Beland, Michael
in
Background levels
,
Baseline studies
,
Biology and Life Sciences
2017
The 2010 BP Deepwater Horizon (DWH) oil spill damaged thousands of km2 of intertidal marsh along shorelines that had been experiencing elevated rates of erosion for decades. Yet, the contribution of marsh oiling to landscape-scale degradation and subsequent land loss has been difficult to quantify. Here, we applied advanced remote sensing techniques to map changes in marsh land cover and open water before and after oiling. We segmented the marsh shorelines into non-oiled and oiled reaches and calculated the land loss rates for each 10% increase in oil cover (e.g. 0% to >70%), to determine if land loss rates for each reach oiling category were significantly different before and after oiling. Finally, we calculated background land-loss rates to separate natural and oil-related erosion and land loss. Oiling caused significant increases in land losses, particularly along reaches of heavy oiling (>20% oil cover). For reaches with ≥20% oiling, land loss rates increased abruptly during the 2010-2013 period, and the loss rates during this period are significantly different from both the pre-oiling (p < 0.0001) and 2013-2016 post-oiling periods (p < 0.0001). The pre-oiling and 2013-2016 post-oiling periods exhibit no significant differences in land loss rates across oiled and non-oiled reaches (p = 0.557). We conclude that oiling increased land loss by more than 50%, but that land loss rates returned to background levels within 3-6 years after oiling, suggesting that oiling results in a large but temporary increase in land loss rates along the shoreline.
Journal Article
Comparison of Methods for Modeling Fractional Cover Using Simulated Satellite Hyperspectral Imager Spectra
by
Roberts, Dar A.
,
Roth, Keely L.
,
Meerdink, Susan K.
in
Agricultural ecosystems
,
agroecosystems
,
Atmospheric correction
2019
Remotely sensed data can be used to model the fractional cover of green vegetation (GV), non-photosynthetic vegetation (NPV), and soil in natural and agricultural ecosystems. NPV and soil cover are difficult to estimate accurately since absorption by lignin, cellulose, and other organic molecules cannot be resolved by broadband multispectral data. A new generation of satellite hyperspectral imagers will provide contiguous narrowband coverage, enabling new, more accurate, and potentially global fractional cover products. We used six field spectroscopy datasets collected in prior experiments from sites with partial crop, grass, shrub, and low-stature resprouting tree cover to simulate satellite hyperspectral data, including sensor noise and atmospheric correction artifacts. The combined dataset was used to compare hyperspectral index-based and spectroscopic methods for estimating GV, NPV, and soil fractional cover. GV fractional cover was estimated most accurately. NPV and soil fractions were more difficult to estimate, with spectroscopic methods like partial least squares (PLS) regression, spectral feature analysis (SFA), and multiple endmember spectral mixture analysis (MESMA) typically outperforming hyperspectral indices. Using an independent validation dataset, the lowest root mean squared error (RMSE) values were 0.115 for GV using either normalized difference vegetation index (NDVI) or SFA, 0.164 for NPV using PLS, and 0.126 for soil using PLS. PLS also had the lowest RMSE averaged across all three cover types. This work highlights the need for more extensive and diverse fine spatial scale measurements of fractional cover, to improve methodologies for estimating cover in preparation for future hyperspectral global monitoring missions.
Journal Article
Optimizing Landsat Next Shortwave Infrared Bands for Crop Residue Characterization
2022
This study focused on optimizing the placement of shortwave infrared (SWIR) bands for pixel-level estimation of fractional crop residue cover (fR) for the upcoming Landsat Next mission. We applied an iterative wavelength shift approach to a database of crop residue field spectra collected in Beltsville, Maryland, USA (n = 916) and computed generalized two- and three-band spectral indices for all wavelength combinations between 2000 and 2350 nm, then used these indices to model field-measured fR. A subset of the full dataset with a Normalized Difference Vegetation Index (NDVI) < 0.3 threshold (n = 643) was generated to evaluate green vegetation impacts on fR estimation. For the two-band wavelength shift analyses applied to the NDVI < 0.3 dataset, a generalized normalized difference using 2226 nm and 2263 nm bands produced the top fR estimation performance (R2 = 0.8222; RMSE = 0.1296). These findings were similar to the established two-band Shortwave Infrared Normalized Difference Residue Index (SINDRI) (R2 = 0.8145; RMSE = 0.1324). Performance of the two-band generalized normalized difference and SINDRI decreased for the full-NDVI dataset (R2 = 0.5865 and 0.4144, respectively). For the three-band wavelength shift analyses applied to the NDVI < 0.3 dataset, a generalized ratio-based index with a 2031–2085–2216 nm band combination, closely matching established Cellulose Absorption Index (CAI) bands, was top performing (R2 = 0.8397; RMSE = 0.1231). Three-band indices with CAI-type wavelengths maintained top fR estimation performance for the full-NDVI dataset with a 2036–2111–2217 nm band combination (R2 = 0.7581; RMSE = 0.1548). The 2036–2111–2217 nm band combination was also top performing in fR estimation (R2 = 0.8690; RMSE = 0.0970) for an additional analysis assessing combined green vegetation cover and surface moisture effects. Our results indicate that a three-band configuration with band centers and wavelength tolerances of 2036 nm (±5 nm), 2097 nm (±14 nm), and 2214 (±11 nm) would optimize Landsat Next SWIR bands for fR estimation.
Journal Article
Spectroscopic detection of microbial colonization in Antarctic sandstone
2021
We report infrared reflectance and ultraviolet fluorescence spectra of the surfaces and cleaved side of Beacon Sandstone from Antarctica that harbours a cryptoendolithic microbial community - a photosynthesis-based consortium of algae, lichen and bacteria present a few millimetres below the surface. Chlorophyll absorptions were present in the reflectance spectra of the exposed interior but not on the top or bottom surfaces and their band depths changed < 4% between measurements taken 19 years apart, indicating the stability of the microorganisms when the sample is kept dry. The presence of subsurface organic layers was detected in reflectance at 3.41 μm on the sample's surface. Fluorescence spectra of the cleaved side showed the blue fluorescence peaks expected from chlorophyll but no 0.65–0.80 μm peaks seen in fluorescence measurements of green vegetation. A weak fluorescence signal was detectable at the surface of the sample, presumably due to some light leaking into the subsurface through pores or cracks in the goethite coating the sample's surface. Theoretically, this weak fluorescence signal could possibly be observed in rock surfaces broken by erosion or meteor impacts on Mars. Sandstone outcrops have been reported on Mars and detection of organic layers in sandstones there would be of interest.
Journal Article
Improved constraints on hematite refractive index for estimating climatic effects of dust aerosols
by
Brodrick, Philip G.
,
Pérez García-Pando, Carlos
,
Miller, Ron L.
in
Absorption
,
Aerosols
,
Climate change
2024
Uncertainty in desert dust composition poses a big challenge to understanding Earth’s climate across different epochs. Of particular concern is hematite, an iron-oxide mineral dominating the solar absorption by dust particles, for which current estimates of absorption capacity vary by over two orders of magnitude. Here, we show that laboratory measurements of dust composition, absorption, and scattering provide valuable constraints on the absorption potential of hematite, substantially narrowing its range of plausible values. The success of this constraint is supported by results from an atmospheric transport model compared with station-based measurements. Additionally, we identify substantial bias in simulating hematite abundance in dust aerosols with current soil mineralogy descriptions, underscoring the necessity for improved data sources. Encouragingly, the next-generation imaging spectroscopy remote sensing data hold promise for capturing the spatial variability of hematite. These insights have implications for enhancing dust modeling, thus contributing to efforts in climate change mitigation and adaptation.
Journal Article
Adaptation and Response in Drylands (ARID): Community Insights for Scoping a NASA Terrestrial Ecology Field Campaign in Drylands
2024
Dryland ecosystems cover 40% of our planet's land surface, support billions of people, and are responding rapidly to climate and land use change. These expansive systems also dominate core aspects of Earth's climate, storing and exchanging vast amounts of water, carbon, and energy with the atmosphere. Despite their indispensable ecosystem services and high vulnerability to change, drylands are one of the least understood ecosystem types, partly due to challenges studying their heterogeneous landscapes and misconceptions that drylands are unproductive “wastelands.” Consequently, inadequate understanding of dryland processes has resulted in poor model representation and forecasting capacity, hindering decision making for these at‐risk ecosystems. NASA satellite resources are increasingly available at the higher resolutions needed to enhance understanding of drylands' heterogeneous spatiotemporal dynamics. NASA's Terrestrial Ecology Program solicited proposals for scoping a multi‐year field campaign, of which Adaptation and Response in Drylands (ARID) was one of two scoping studies selected. A primary goal of the scoping study is to gather input from the scientific and data end‐user communities on dryland research gaps and data user needs. Here, we provide an overview of the ARID team's community engagement and how it has guided development of our framework. This includes an ARID kickoff meeting with over 300 participants held in October 2023 at the University of Arizona to gather input from data end‐users and scientists. We also summarize insights gained from hundreds of follow‐up activities, including from a tribal‐engagement focused workshop in New Mexico, conference town halls, intensive roundtables, and international engagements. Plain Language Summary Drylands are landscapes with limited water availability, which cover 40% of Earth's land surfaces, support billions of humans, and play a substantial role in Earth's weather and climate systems. However, these ecosystems are under threat from droughts and heatwaves. They are also poorly understood because of challenges measuring their highly diverse vegetation types and interspersed vegetation cover and because of incorrect perceptions that they are unimportant “wastelands.” These limitations make it challenging to manage their landscapes and quantify how drylands are driving Earth's weather and climate. NASA solicited proposals for a multi‐year field campaign, of which Adaptation and Response in Drylands (ARID) was one of two scoping studies selected. The ARID scoping study aims to design a plan for how NASA satellite, aircraft, and field instruments can be used to better understand dryland ecosystems and their response to change. A primary scoping goal is to engage with scientists and data‐users, especially those who manage land, to understand research and management priorities in drylands. Here, we discuss details of our meeting with over 300 scientists and data‐users in Tucson, AZ in October 2023. We also highlight feedback from our tribal‐focused workshop in New Mexico, conference town halls, and international meetings. Key Points Adaptation and Response in Drylands (ARID) is a 1‐year scoping study for a multi‐year NASA Terrestrial Ecology dryland field campaign An ARID workshop was held in Tucson, Arizona in October 2023 with more than 30 data end‐users and 300 scientists in attendance Further input from hundreds of researchers and end‐users was obtained through workshops, conference townhalls, and tribal engagement
Journal Article
DRILL CORE MINERAL ANALYSIS BY MEANS OF THE HYPERSPECTRAL IMAGING SPECTROMETER HySpex, XRD AND ASD IN PROXIMITY OF THE MÝTINA MAAR, CZECH REPUBLIC
2015
Imaging spectroscopy is increasingly used for surface mapping. Therefore different expert systems are being utilized to identify surface cover materials. Those expert systems mainly rely on the spectral comparison between unknown and library spectra, but their performances were only limited qualified. This study aims on the comparative analysis of drill core samples from the recently discovered maar system in the Czech Republic. Drill core samples from the surrounding area of the Mýtina maar were analyzed by X-Ray diffraction (XRD) and the hyperspectral spectrometer HySpex. Additionally, soil samples were measured in-situ by the ASD FieldSpec4 and in the laboratory by the HySpex VNIR/SWIR spectrometer system. The data was then analyzed by the MICA-algorithm and the results were compared to the results of the XRD -analysis. The XRD-analysis served here as validation basis. The results of the hyperspectral and the XRD analyses were used to densify a volcanic map that also integrates in-situ soil measurements in the surrounding area of Mýtina. The comparison of the XRD- and solaroptical remote sensing results showed a good correlation of qualified minerals if the soil organic carbon content was significantly low. Contrary to XRD, smectites and muscovites were also straightforward identified that underlines the overall performance of the approach to identify minerals. Basically, in this work an operable approach is proposed that enables the fast, repeatable and detailed analysis of drill cores, drill core samples and soil samples and, hence, provides a higher performance than state-of-the-art XRD-analyses.
Journal Article
Detection of Salt Marsh Vegetation Stress and Recovery after the Deepwater Horizon Oil Spill in Barataria Bay, Gulf of Mexico Using AVIRIS Data: e78989
2013
The British Petroleum Deepwater Horizon Oil Spill in the Gulf of Mexico was the biggest oil spill in US history. To assess the impact of the oil spill on the saltmarsh plant community, we examined Advanced Visible Infrared Imaging Spectrometer (AVIRIS) data flown over Barataria Bay, Louisiana in September 2010 and August 2011. Oil contamination was mapped using oil absorption features in pixel spectra and used to examine impact of oil along the oiled shorelines. Results showed that vegetation stress was restricted to the tidal zone extending 14 m inland from the shoreline in September 2010. Four indexes of plant stress and three indexes of canopy water content all consistently showed that stress was highest in pixels next to the shoreline and decreased with increasing distance from the shoreline. Index values along the oiled shoreline were significantly lower than those along the oil-free shoreline. Regression of index values with respect to distance from oil showed that in 2011, index values were no longer correlated with proximity to oil suggesting that the marsh was on its way to recovery. Change detection between the two dates showed that areas denuded of vegetation after the oil impact experienced varying degrees of re-vegetation in the following year. This recovery was poorest in the first three pixels adjacent to the shoreline. This study illustrates the usefulness of high spatial resolution airborne imaging spectroscopy to map actual locations where oil from the spill reached the shore and then to assess its impacts on the plant community. We demonstrate that post-oiling trends in terms of plant health and mortality could be detected and monitored, including recovery of these saltmarsh meadows one year after the oil spill.
Journal Article