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34 result(s) for "Kottke, Ingrid"
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Cryptic species revealed by molecular phylogenetic analysis of sequences obtained from basidiomata of Tulasnella
Delimitation of species and the search for a proper threshold for defining phylogenetic species in fungi are under discussion. In this study, morphological and molecular data are correlated to delimit species of Tulasnella, the most important mycobionts of Orchidaceae, which suffer from poor taxonomy. Resupinate basidiomata of Tulasnella species were collected in Ecuador and Germany, and 11 specimens (seven from Ecuador, four from Germany) were assigned to traditional species concepts by use of morphological keys. The specimens were compared by micro-anatomical examination with 75 specimens of Tulasnella borrowed from fungaria to obtain better insights on variation of characters. Sequences of the ITS region (127) were obtained after cloning from the fresh basidiomata and from pure cultures. Proportional variability of ITS sequences was analyzed within and among the cultures and the specimens designated to different morphospecies. Results suggested an intragenomic variation of less than 2%, an intraspecific variation of up to 4% and an interspecific divergence of more than 9% in Tulasnella. Cryptic species in Tulasnella, mostly from Ecuador, were revealed by phylogenetic analyses with 4% intraspecific divergence as a minimum threshold for delimiting species. Conventional diagnostic morphological characters appeared insufficient for species characterization. Arguments are presented for molecular delimitation of the established species Tulasnella albida, T. asymmetrica, T. eichleriana, T. cf. pinicola, T. tomaculum and T. violea.
Nitrogen deposition and ectomycorrhizas
As a result of increasing anthropogenic nitrogen deposition, N availability in many forest ecosystems, which are normally N-limited, has been enhanced. We discuss the impacts of this increased N availability on the ectomycorrhizal (ECM) symbiosis which is generally regarded as an adaptation to nutrient limited conditions. Nitrogen deposition can influence fruit-body formation by ECM fungi, the production and distribution of the extraradical mycelium in the soil and the formation of ectomycorrhizas. Available data from long-term N deposition studies indicate that the most prominent effects might be discernible above-ground (i.e. on the formation of fruit bodies). ‘Generalist’ species, forming a symbiosis with a wide range of tree species, seem to be less affected by increased N availability than ‘specialist’ species, especially those living in symbiosis with conifers. However, the importance of below-ground investigations to determine the impacts of N deposition on the ECM symbiosis must not be underestimated. Culture experiments show an optimum N concentration for the formation of extraradical mycelium and mycorrhizas. Often, negative effects only become visible at comparatively high N concentrations, but the use of a few easily cultivated species of ECM fungi, which are adapted to higher N concentrations, undermines our ability to generalize. So far, N deposition experiments in the field have only shown minor changes in the below-ground mycorrhizal population, as estimated from the investigation of mycorrhizal root tips. However, effects on the ECM mycelium, which is the main fungal component in terms of nutrient uptake, cannot be excluded and need further consideration. Because the photoassimilate supply from the plant to the fungal partner is crucial for the maintenance of the ECM symbiosis, we discuss the possible physiological implications of increasing N inputs on the allocation of C to the fungus. Together with ultrastructural changes, physiological effects might precede obvious visible changes and might therefore be useful early indicators of negative impacts of increasing N inputs on the ECM symbiosis.
Defining species in Tulasnella by correlating morphology and nrDNA ITS-5.8S sequence data of basidiomata from a tropical Andean forest
The genus Tulasnella comprises important orchid mycobionts. Molecular phylogenetic studies on nrITS-5.8S sequences of Tulasnella species previously isolated from mycorrhizas of epiphytic orchids from a tropical Andean forest showed genomic variability among clones which was difficult to interpret as intra- or interspecific variations or to correlate with described Tulasnella species. To improve this situation, we collected basidiomata of Tulasnella in an Andean forest, studied part of the sequences of fungal ribosomal genes and correlated molecular data with the morphology of the specimens. Within five basidiomata displaying slight morphological variability, we found inter-specimen nrITS1-5.8S-ITS2 variability corresponding to proportional differences of less than 1% except for one clone with 5.1% divergence. Results indicate that the slightly variable basidiomata should be considered as one species, which is morphologically tentatively assigned to the Tulasnella pruinosa complex. However, comparison of nrITS1-5.8S-ITS2 sequences, including sequences of T. pruinosa from other origins, indicate that Tulasnella sp. is only distantly related to the T. pruinosa specimens included in the analyses. Sequences of all morphologically similar and taxonomically well-identified species are required to decide whether the basidiomata analyzed in the present study represent a new species. The new sequences are rather similar to sequences obtained previously from mycorrhizae of epiphytic orchids of the same area indicating mycorrhizal potential of this fungus.
Molecular diversity of arbuscular mycorrhizal fungi in Prunus africana, an endangered medicinal tree species in dry Afromontane forests of Ethiopia
• The molecular diversity of arbuscular mycorrhizal (AM) fungi colonizing roots of Prunus africana and of AM fungal spores obtained from baiting cultures of indigenous soils from two dry afromontane forests of Ethiopia was investigated. • The internal transcribed spacer (ITS) rDNA region from colonized roots and single spores of three AM fungal spore types was amplified, cloned and sequenced using AM fungal specific primers. • Phylogenetic analysis using the 5.8S rDNA data set revealed that 109 of the sequences obtained belong to members of the Glomeromycota. Subsequent 5.8S/ITS2 rDNA sequence analysis indicated high AM fungal diversity and dominance of Glomus types. Twenty sequence types belonged to the Glomeraceae and one each to the Diversisporaceae and Archaeosporaceae. Two of the three spore types were identified as Glomus etunicatum and Glomus mosseae. • Twenty of the AM fungal types identified are new to Ethiopia and to science. The AM fungal community differed between the two sites studied.
Mycorrhizal Associations in Ferns from Southern Ecuador
We conducted a survey on the mycorrhizal status of neotropical ferns, focusing on previously neglected taxa. These include the filmy ferns (Hymenophyllaceae), grammitid ferns (Polypodiaceae), and the genus Elaphoglossum (Dryopteridaceae). Samples were collected at different sites in southern Ecuador, Prov. Loja, Morona-Santiago, and Zamora-Chinchipe. Among the 85 investigated species (101 samples, 10 families), 19 were associated with arbuscular mycorrhizal fungi (AMF) and 36 were infected by dark septate endophytes (DSE), which are identified as ascomycetes and here considered as a kind of mycorrhiza similar to the ericoid type. The roots of 30 species (including all non-grammitid Polypodiaceae and half of the Elaphoglossum species) were free of evident fungal infection. AMF were frequent in terrestrial species (29.10% of species, or 48.49% of infected terrestrial samples). DSE prevailed in epiphytic species (58.62% of species, or 96.15% of infected epiphytic samples) and were also common in terrestrial samples of predominantly epiphytic species.
Anatomy and ultrastructure of mycorrhizal associations of neotropical Ericaceae
Ericaceae are obligatory associated with symbiotic fungi forming several, distinctive categories of mycorrhizas. While ericoid, arbutoid, and monotropoid mycorrhizas are known since many years from ericads of the northern hemisphere and the ericoid mycorrhiza also from Australia, a further mycorrhizal category with hyphal sheath, Hartig net, and intracellular colonization was described by us recently and termed cavendishioid mycorrhiza because it was found on Cavendishia nobilis, a species belonging to the Andean clade (Vaccinioideae) of Ericaceae. As the previous findings indicated a correlation between the mycorrhizal category and the systematic position of Ericaceae, we tested the hypothesis that other ericads of the Andean clade might also form cavendishioid mycorrhizas, while ericads occurring in the same area but not belonging to the Andean clade might not. Mycorrhizas of 20 different ericaceous species, 15 belonging to the Andean clade and 5 to other Vaccinioideae or Ericoideae, were sampled in the tropical mountain rain forest area of South Ecuador and investigated by light and electron microscopy. All the 15 members of the Andean clade ericads displayed a hyphal sheath, as well as inter- and intracellular colonization by hyphae as was found on Cavendishia previously. The five species not belonging to the Andean clade ericads displayed only intracellular colonization by hyphae and hence were typical ericoid mycorrhizal. Ultrastructural studies revealed Sebacinales and ascomycetes as mycorrhiza formers in both associations even within one single cell. The results thus support the hypothesis that the Andean clade of Ericaceae forms mycorrhizas distinct from the arbutoid category and most likely presents an independent evolutionary line in the Ericaceae derived from the ericoid mycorrhizas, justifying the new term \"cavendishioid mycorrhiza\".[PUBLICATION ABSTRACT]
Atractiellomycetes belonging to the ‘rust’ lineage (Pucciniomycotina) form mycorrhizae with terrestrial and epiphytic neotropical orchids
Distinctive groups of fungi are involved in the diverse mycorrhizal associations of land plants. All previously known mycorrhiza-forming Basidiomycota associated with trees, ericads, liverworts or orchids are hosted in Agaricomycetes, Agaricomycotina. Here we demonstrate for the first time that Atractiellomycetes, members of the ‘rust’ lineage (Pucciniomycotina), are mycobionts of orchids. The mycobionts of 103 terrestrial and epiphytic orchid individuals, sampled in the tropical mountain rainforest of Southern Ecuador, were identified by sequencing the whole ITS1-5.8S-ITS2 region and part of 28S rDNA. Mycorrhizae of 13 orchid individuals were investigated by transmission electron microscopy. Simple septal pores and symplechosomes in the hyphal coils of mycorrhizae from four orchid individuals indicated members of Atractiellomycetes. Molecular phylogeny of sequences from mycobionts of 32 orchid individuals out of 103 samples confirmed Atractiellomycetes and the placement in Pucciniomycotina, previously known to comprise only parasitic and saprophytic fungi. Thus, our finding reveals these fungi, frequently associated to neotropical orchids, as the most basal living basidiomycetes involved in mycorrhizal associations of land plants.
Subcellular localization of cadmium in the root cells ofAllium cepa by electron energy loss spectroscopy and cytochemistry
The ultrastructural investigation of the root cells ofAllium cepa L. exposed to 1 mM and 10 mM cadmium (Cd) for 48 and 72 h was carried out. The results indicated that Cd induced several obvious ultrastructural changes such as increased vacuolation, condensed cytoplasm with increased density of the matrix, reduction of mitochondrial cristae, severe plasmolysis and highly condensed nuclear chromatin. Electron dense granules appeared between the cell wall and plasmalemma. In vacuoles, electron dense granules encircled by the membrane were aggregated and formed into larger precipitates, which increase in number and volume as a consequence of excessive Cd exposure. Data from electron energy loss spectroscopy (EELS) confirmed that these granules contained Cd and showed that significantly higher level of Cd in vacuoles existed in the vacuolar precipitates of meristematic or cortical parenchyma cells of the differentiating and mature roots treated with 1 mM and 10 mM Cd. High levels of Cd were also observed in the crowded electron dense granules of nucleoli. However, no Cd was found in cell walls or in cells of the vascular cylinder. A positive Gomori-Swift reaction showed that small metallic silver grains were abundantly localized in the vesicles, which were distributed in the cytoplasm along the cell wall.
Main fungal partners and different levels of specificity of orchid mycorrhizae in the tropical mountain forests of Ecuador
Orchids are a main component of the diversity of vascular plants in Ecuador with approximately 4000 species representing about 5.3% of the orchid species described worldwide. More than a third of these species are endemics. As orchids, in contrast to other plants, depend on mycorrhizal fungi already for seed germination and early seedling establishment, availability of appropriate fungi may strongly influence distribution of orchid populations. It is currently debated if green orchids depend on specific mycobionts or may be equally promoted by a broad spectrum of mycorrhizal fungi, discussion mostly based on data from temperate regions. Here we summarize results obtained from broad scale investigations in the tropical mountain rain forest of Ecuador revealing associations with members of Serendipitaceae (Sebacinales), Tulasnellaceae, Ceratobasidiaceae (Cantharellales), and Atractiellales. Recent molecular data show that these worldwide spread fungal groups have broad ecological implications and are specifically suited as mycorrhizal fungi of green orchids. We found that main fungal partners and different levels of specificity among orchids and their mycobionts in the tropical mountain forests correspond to findings in other biomes despite the large ecological differences.