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4,158 result(s) for "Krause, E"
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Retrospective exploratory evaluation of individual pigs’ behaviour involved in tail biting during rearing and fattening
Tail biting is one of the biggest welfare problems in pigs. However, depending on the individuals involved (e.g., tail biter/victim), pigs seem to change their behaviour prior to tail biting events, which raises the possibility of early detection and thus prediction and prevention of tail biting. In this retrospective explorative study, we used datasets from four different studies with 9 trials of rearing (4 pens/trial with 24 pigs/pen) and fattening (8 pens/trial with 12 pigs/pen) that focused on the exploration behaviour of undocked pigs towards plant-based enrichment materials. From this dataset, we identified 8 pens from rearing (n = 192 pigs) and 6 pens from fattening (n = 72 pigs) in which individual tail biters were identified. From this dataset, we investigated whether any a priori behavioural changes in exploration or feeding could be identified with respect to tail biting. Furthermore, the effects of weight parameters from suckling to fattening were examined. Using linear mixed effects models, we found that exploration duration was linked to days prior to tail biting in rearing, depending on CatPig (category of pigs: biter, victim, neutral pig) (P = 0.001), in fattening independent of CatPig (P<0.0001), and by duration, amount and frequency of feed consumption in fattening (P<0.0001). Some weight parameters covaried with CatPig in rearing (weight-gain suckling: P = 0.0018; weaning weight: P = 0.019) and fattening (weaning weight: P = 0.07; start weight at fattening: P = 0.03; weight-gain rearing: P = 0.02). Suitable indicators for future early detection trials of tail biting could be exploration duration in rearing and fattening and feeding data in fattening. Moreover, weight parameters in rearing and fattening and exploration duration in rearing may be used to identify individual pigs that might become tail biters in an upcoming tail biting event. The retrospective explorative nature of our analysis revealed interesting patterns; however, further studies are needed to confirm our findings.
Evidence of cryptic methane cycling and non-methanogenic methylamine consumption in the sulfate-reducing zone of sediment in the Santa Barbara Basin, California
The recently discovered cryptic methane cycle in the sulfate-reducing zone of marine and wetland sediment couples methylotrophic methanogenesis to anaerobic oxidation of methane (AOM). Here we present evidence of cryptic methane cycling activity within the upper regions of the sulfate-reducing zone, along a depth transect within the Santa Barbara Basin, off the coast of California, USA. The top 0–20 cm of sediment from each station was subjected to geochemical analyses and radiotracer incubations using 35S–SO42-, 14C–mono-methylamine, and 14C–CH4 to find evidence of cryptic methane cycling. Methane concentrations were consistently low (3 to 16 µM) across the depth transect, despite AOM rates increasing with decreasing water depth (from max 0.05 nmol cm−3 d−1 at the deepest station to max 1.8 nmol cm−3 d−1 at the shallowest station). Porewater sulfate concentrations remained high (23 to 29 mM), despite the detection of sulfate reduction activity from 35S–SO42- incubations with rates up to 134 nmol cm−3 d−1. Metabolomic analysis showed that substrates for methanogenesis (i.e., acetate, methanol and methylamines) were mostly below the detection limit in the porewater, but some samples from the 1–2 cm depth section showed non-quantifiable evidence of these substrates, indicating their rapid turnover. Estimated methanogenesis from mono-methylamine ranged from 0.2 to 0.5 nmol cm−3 d−1. Discrepancies between the rate constants (k) of methanogenesis (from 14C–mono-methylamine) and AOM (from either 14C–mono-methylamine-derived 14C–CH4 or from directly injected 14C–CH4) suggest the activity of a separate, concurrent metabolic process directly metabolizing mono-methylamine to inorganic carbon. We conclude that the results presented in this work show strong evidence of cryptic methane cycling occurring within the top 20 cm of sediment in the Santa Barbara Basin. The rapid cycling of carbon between methanogenesis and methanotropy likely prevents major build-up of methane in the sulfate-reducing zone. Furthermore, our data suggest that methylamine is utilized by both methanogenic archaea capable of methylotrophic methanogenesis and non-methanogenic microbial groups. We hypothesize that sulfate reduction is responsible for the additional methylamine turnover, but further investigation is needed to elucidate this metabolic activity.
Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats
Many microbes in nature reside in dense, metabolically interdependent communities. We investigated the nature and extent of microbe-virus interactions in relation to microbial density and syntrophy by examining microbe-virus interactions in a biomass dense, deep-sea hydrothermal mat. Using metagenomic sequencing, we find numerous instances where phylogenetically distant (up to domain level) microbes encode CRISPR-based immunity against the same viruses in the mat. Evidence of viral interactions with hosts cross-cutting microbial domains is particularly striking between known syntrophic partners, for example those engaged in anaerobic methanotrophy. These patterns are corroborated by proximity-ligation-based (Hi-C) inference. Surveys of public datasets reveal additional viruses interacting with hosts across domains in diverse ecosystems known to harbour syntrophic biofilms. We propose that the entry of viral particles and/or DNA to non-primary host cells may be a common phenomenon in densely populated ecosystems, with eco-evolutionary implications for syntrophic microbes and CRISPR-mediated inter-population augmentation of resilience against viruses. Metagenomics and Hi-C proximity-ligation sequencing show that viruses in dense microbial communities can interact with multiple, distantly related microbial hosts.
Zebra Finch chicks recognise parental scent, and retain chemosensory knowledge of their genetic mother, even after egg cross-fostering
Mechanisms underlying parent-offspring recognition in birds have fascinated researchers for centuries. Yet, the possibility that chicks recognise parental odour at hatching has been completely overlooked, despite the fact that olfaction is one of the first sensory modalities to develop, and social chemosignals occur in avian taxa. Here we show that Zebra Finch chicks ( Taeniopygia guttata ) are capable of identifying parental odours at hatching. In our first experiment, chicks begged significantly longer in response to the odour of their genetic mother or father compared to the odour of a non-relative of the same sex and reproductive status. In a second experiment, we cross-fostered eggs and tested the response of hatchlings to the scent of genetic vs. foster parents. Chicks from cross-fostered eggs responded significantly more to the odour of their genetic mother than their foster mother, but exhibited no difference in response to genetic vs. foster fathers. This is the first evidence that embryonic altricial birds are capable of acquiring chemosensory knowledge of their parents during early development, and retain chemical familiarity with their genetic mother despite egg cross-fostering. Furthermore our data reveals that kin recognition in birds can develop without any association with a genetic parent at hatching.
Rapid metabolism fosters microbial survival in the deep, hot subseafloor biosphere
A fourth of the global seabed sediment volume is buried at depths where temperatures exceed 80 °C, a previously proposed thermal barrier for life in the subsurface. Here, we demonstrate, utilizing an extensive suite of radiotracer experiments, the prevalence of active methanogenic and sulfate-reducing populations in deeply buried marine sediment from the Nankai Trough subduction zone, heated to extreme temperature (up to ~120 °C). The small microbial community subsisted with high potential cell-specific rates of energy metabolism, which approach the rates of active surface sediments and laboratory cultures. Our discovery is in stark contrast to the extremely low metabolic rates otherwise observed in the deep subseafloor. As cells appear to invest most of their energy to repair thermal cell damage in the hot sediment, they are forced to balance delicately between subsistence near the upper temperature limit for life and a rich supply of substrates and energy from thermally driven reactions of the sedimentary organic matter. In the deep sedimentary biosphere, 80 °C has been proposed as an upper thermal barrier for life. Using a suite of radiotracer experiments, this study reports active methanogenic and sulfate-reducing microbial populations with high cell-specific metabolic rates in deeply buried marine sediments from the Nankai Trough subduction zone, which reach temperatures up to 120 °C.
Mechanochemical strengthening of a synthetic polymer in response to typically destructive shear forces
High shear stresses are known to trigger destructive bond-scission reactions in polymers. Recent work has shown that the same shear forces can be used to accelerate non-destructive reactions in mechanophores along polymer backbones, and it is demonstrated here that such mechanochemical reactions can be used to strengthen a polymer subjected to otherwise destructive shear forces. Polybutadiene was functionalized with dibromocyclopropane mechanophores, whose mechanical activation generates allylic bromides that are crosslinked in situ by nucleophilic substitution reactions with carboxylates. The crosslinking is activated efficiently by shear forces both in solvated systems and in bulk materials, and the resulting covalent polymer networks possess moduli that are orders-of-magnitude greater than those of the unactivated polymers. These molecular-level responses and their impact on polymer properties have implications for the design of materials that, like biological materials, actively remodel locally as a function of their physical environment. Materials typically break down in response to the repeated mechanical forces that they experience during use. Now, it has been shown that a mechanochemically active polymer can respond to shear forces by forming more bonds than are broken, leading to improved mechanical properties under conditions that would otherwise be destructive.
Editorial: Compensatory growth: an adaptation to environmental stress in plants and animals
Interest in CG continues to be a stable Research Topic of interest with on average 463 paper/year in the last decade (i.e. Web of Science, search term “compensatory growth”, time-period 2014-2023, minimum annual records 398, maximum 522; as of 2024-01-10). Notwithstanding that many interactions between plants and other types of organisms may be neutral or positive (e.g., pollinator-plant mutualisms), insect herbivores can stress their plant hosts by removing plant tissue or vectoring viruses. [...]damage may occur at different plant stages thus adding a ontogenic slant to the problem.Bustos-Segura et al.used an experimental approach to show that lima bean plants are more likely to generate CG or tolerance in the lingo to plant-insect interactions. [...]in a series of papers that relate CG to the enhancement of forest productivity since the concept of CG being introduced into forestry research to explain diverse post-thinning stand dynamics byLi et al.
Compartments revealed in food-web structure
Compartments 1 in food webs are subgroups of taxa in which many strong interactions occur within the subgroups and few weak interactions occur between the subgroups 2 . Theoretically, compartments increase the stability in networks 1 , 2 , 3 , 4 , 5 , such as food webs. Compartments have been difficult to detect in empirical food webs because of incompatible approaches 6 , 7 , 8 , 9 or insufficient methodological rigour 8 , 10 , 11 . Here we show that a method for detecting compartments from the social networking science 12 , 13 , 14 identified significant compartments in three of five complex, empirical food webs. Detection of compartments was influenced by food web resolution, such as interactions with weights. Because the method identifies compartmental boundaries in which interactions are concentrated, it is compatible with the definition of compartments. The method is rigorous because it maximizes an explicit function, identifies the number of non-overlapping compartments, assigns membership to compartments, and tests the statistical significance of the results 12 , 13 , 14 . A graphical presentation 14 reveals systemic relationships and taxa-specific positions as structured by compartments. From this graphic, we explore two scenarios of disturbance to develop a hypothesis for testing how compartmentalized interactions increase stability in food webs 15 , 16 , 17 .
Suggestions to Derive Maximum Stocking Densities for Layer Pullets
Stocking densities for domestic chickens (Gallus gallus domesticus) are regulated by the Council Directives of the European Union for both laying hens and broiler chickens. For layer pullets no regulation of stocking density has been established yet. Based on the existing Council Directives for laying hens (1999/74/EC), broiler chickens (2007/43/EC) and calculations of the floor space that is required for the respective chicken’s body, we exemplarily calculated maximum stocking densities for layer pullets. Based on the calculations we obtained absolute additional spaces for birds of different live body mass classes, i.e., useable floor space that the birds have additionally available to the space covered by their body. This allowed us to calculate the relative additional space per individual. We suggest the relative additional space to be a key parameter to derive requirements for a maximum stocking density in layer pullets. We analysed several scenarios for pullets under consideration of the Council Directives for laying hens and for broiler chickens, coming to the conclusion that layer pullets at the end of their rearing period should be provided ideally with a relative additional space of about 40–60%.