Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
DisciplineDiscipline
-
Is Peer ReviewedIs Peer Reviewed
-
Item TypeItem Type
-
SubjectSubject
-
YearFrom:-To:
-
More FiltersMore FiltersSourceLanguage
Done
Filters
Reset
777
result(s) for
"Kumar, Vaibhav"
Sort by:
Spatiotemporal sentiment variation analysis of geotagged COVID-19 tweets from India using a hybrid deep learning model
2022
India is a hotspot of the COVID-19 crisis. During the first wave, several lockdowns (L) and gradual unlock (UL) phases were implemented by the government of India (GOI) to curb the virus spread. These phases witnessed many challenges and various day-to-day developments such as virus spread and resource management. Twitter, a social media platform, was extensively used by citizens to react to these events and related topics that varied temporally and geographically. Analyzing these variations can be a potent tool for informed decision-making. This paper attempts to capture these spatiotemporal variations of citizen reactions by predicting and analyzing the sentiments of geotagged tweets during L and UL phases. Various sentiment analysis based studies on the related subject have been done; however, its integration with location intelligence for decision making remains a research gap. The sentiments were predicted through a proposed hybrid Deep Learning (DL) model which leverages the strengths of BiLSTM and CNN model classes. The model was trained on a freely available Sentiment140 dataset and was tested over manually annotated COVID-19 related tweets from India. The model classified the tweets with high accuracy of around 90%, and analysis of geotagged tweets during L and UL phases reveal significant geographical variations. The findings as a decision support system can aid in analyzing citizen reactions toward the resources and events during an ongoing pandemic. The system can have various applications such as resource planning, crowd management, policy formulation, vaccination, prompt response, etc.
Journal Article
Neurological consequences of COVID-19: what have we learned and where do we go from here?
2020
The coronavirus disease-19 (COVID-19) pandemic is an unprecedented worldwide health crisis. COVID-19 is caused by SARS-CoV-2, a highly infectious pathogen that is genetically similar to SARS-CoV. Similar to other recent coronavirus outbreaks, including SARS and MERS, SARS-CoV-2 infected patients typically present with fever, dry cough, fatigue, and lower respiratory system dysfunction, including high rates of pneumonia and acute respiratory distress syndrome (ARDS); however, a rapidly accumulating set of clinical studies revealed atypical symptoms of COVID-19 that involve neurological signs, including headaches, anosmia, nausea, dysgeusia, damage to respiratory centers, and cerebral infarction. These unexpected findings may provide important clues regarding the pathological sequela of SARS-CoV-2 infection. Moreover, no efficacious therapies or vaccines are currently available, complicating the clinical management of COVID-19 patients and emphasizing the public health need for controlled, hypothesis-driven experimental studies to provide a framework for therapeutic development. In this mini-review, we summarize the current body of literature regarding the central nervous system (CNS) effects of SARS-CoV-2 and discuss several potential targets for therapeutic development to reduce neurological consequences in COVID-19 patients.
Journal Article
Understanding Acquired Brain Injury: A Review
by
Vaibhav, Kumar
,
Khan, Andleeb
,
Sahu, Ankita
in
Acquired Brain Injury (ABI)
,
Brain
,
brain functions
2022
Any type of brain injury that transpires post-birth is referred to as Acquired Brain Injury (ABI). In general, ABI does not result from congenital disorders, degenerative diseases, or by brain trauma at birth. Although the human brain is protected from the external world by layers of tissues and bone, floating in nutrient-rich cerebrospinal fluid (CSF); it remains susceptible to harm and impairment. Brain damage resulting from ABI leads to changes in the normal neuronal tissue activity and/or structure in one or multiple areas of the brain, which can often affect normal brain functions. Impairment sustained from an ABI can last anywhere from days to a lifetime depending on the severity of the injury; however, many patients face trouble integrating themselves back into the community due to possible psychological and physiological outcomes. In this review, we discuss ABI pathologies, their types, and cellular mechanisms and summarize the therapeutic approaches for a better understanding of the subject and to create awareness among the public.
Journal Article
Solution-state methyl NMR spectroscopy of large non-deuterated proteins enabled by deep neural networks
2024
Methyl-TROSY nuclear magnetic resonance (NMR) spectroscopy is a powerful technique for characterising large biomolecules in solution. However, preparing samples for these experiments is demanding and entails deuteration, limiting its use. Here we demonstrate that NMR spectra recorded on protonated, uniformly
13
C labelled samples can be processed using deep neural networks to yield spectra that are of similar quality to typical deuterated methyl-TROSY spectra, potentially providing information for proteins that cannot be produced in bacterial systems. We validate the methodology experimentally on three proteins with molecular weights in the range 42–360 kDa. We further demonstrate the applicability of our methodology to 3D NOESY spectra of
Escherichia coli
Malate Synthase G (81 kDa), where observed NOE cross-peaks are in good agreement with the available structure. The method represents an advance in the field of using deep learning to analyse complex magnetic resonance data and could have an impact on the study of large biomolecules in years to come.
Here, the authors show deep neural networks can be trained to transform crowded
1
H,
13
C-NMR spectra of large proteins into readily interpretable spectra, negating the requirement for uniform deuteration to analyse complex NMR spectra.
Journal Article
Revisiting Traumatic Brain Injury: From Molecular Mechanisms to Therapeutic Interventions
by
Gupta, Rohan V.
,
Ahluwalia, Meenakshi
,
Vaibhav, Kumar
in
Apoptosis
,
Blood-brain barrier
,
Brain damage
2020
Studying the complex molecular mechanisms involved in traumatic brain injury (TBI) is crucial for developing new therapies for TBI. Current treatments for TBI are primarily focused on patient stabilization and symptom mitigation. However, the field lacks defined therapies to prevent cell death, oxidative stress, and inflammatory cascades which lead to chronic pathology. Little can be done to treat the mechanical damage that occurs during the primary insult of a TBI; however, secondary injury mechanisms, such as inflammation, blood-brain barrier (BBB) breakdown, edema formation, excitotoxicity, oxidative stress, and cell death, can be targeted by therapeutic interventions. Elucidating the many mechanisms underlying secondary injury and studying targets of neuroprotective therapeutic agents is critical for developing new treatments. Therefore, we present a review on the molecular events following TBI from inflammation to programmed cell death and discuss current research and the latest therapeutic strategies to help understand TBI-mediated secondary injury.
Journal Article
Lactate detection sensors for food, clinical and biological applications: a review
by
Krishna, Prayaga M
,
Khansili Nishtha
,
Rattu Gurdeep
in
Analytical methods
,
Biosensors
,
Chemistry
2021
l-lactate is a major analyte in the food industry, bioprocess engineering, sports medicine and clinical care unit. l-lactate detection by standard analytical techniques is expensive, time-consuming and difficult for in situ studies. Therefore, selective l-lactate biosensors are developed to overcome the current challenges of food industries and biological sectors. High-throughput nanobiosensors appear promising for on-site detection of lactate in industrial- and laboratory-scale applications. Here, we review principles of lactate sensing techniques and trends in transduction approaches. We discuss nanomaterials, merits and demerits of enzyme-based lactate analysis and commercial testing kits. We present also non-enzymatic nanobiosensors.
Journal Article
Dynamic routing for efficient waste collection in resource constrained societies
by
Anish, Mohammad
,
Priyadarshi, Marut
,
Maratha, Meet
in
639/166/986
,
704/172/4081
,
Developing countries
2023
Waste collection in developing nations faces multi-fold challenges, such as resource constraints and real-time changes in waste values, while finding the optimal routes. This paper attempts to address these challenges by modeling real-time waste values in smart bins and Collection Vehicles (CV). Further, waste value prioritized routes for coordinated CV, during various time intervals are modeled in a multi-agent environment for finding good routes. The CV, as agents, implement the formulated linear program to maximize the collected waste while minimizing the distance to the central depot. The city of Chandigarh, India, was divided into regions and the model was implemented to achieve significantly better performance in terms of waste collected in less distance and total bins covered when compared to the existing scenario. The stakeholders can use the outcomes to effectively plan the resources for better collection practices, which will have a positive impact on the environment.
Journal Article
Pharmacological and Therapeutic Approaches in the Treatment of Epilepsy
by
Ghosh, Shampa
,
Gaur, Pankaj
,
Vaibhav, Kumar
in
Adenosine
,
anti-convulsants
,
anti-epileptic drugs
2021
Epilepsy affects around 50 million people across the globe and is the third most common chronic brain disorder. It is a non-communicable disease of the brain that affects people of all ages. It is accompanied by depression, anxiety, and substantially increased morbidity and mortality. A large number of third-generation anti-epileptic drugs are available, but they have multiple side-effects causing a decline in the quality of life. The inheritance and etiology of epilepsy are complex with multiple underlying genetic and epigenetic mechanisms. Different neurotransmitters play intricate functions to maintain the normal physiology of various neurons. If there is any dysregulation of neurotransmission due to aberrant transmitter levels or their receptor biology, it can result in seizures. In this review, we have discussed the roles played by various neurotransmitters and their receptors in the pathophysiology of epilepsy. Drug-resistant epilepsy (DRE) has remained one of the forefront areas of epilepsy research for a long time. Understanding the mechanisms underlying DRE is of utmost importance because of its high incidence rate among epilepsy patients and increased risks of psychosocial problems and premature death. Here we have enumerated various hypotheses of DRE. Further, we have discussed different non-conventional therapeutic strategies, including combination therapy and non-drug treatment. The recent studies supporting the modern approaches for the treatment of epilepsy have been deliberated with particular reference to the mTOR pathway, breakdown of the blood-brain barrier, and inflammatory pathways.
Journal Article
The potential use of mass timber in mid-to high-rise construction and the associated carbon benefits in the United States
by
Prestemon, Jeffrey P.
,
Bergman, Richard D.
,
Kumar, Vaibhav
in
Biology and Life Sciences
,
Carbon
,
Conservation of Natural Resources
2024
Nonresidential and mid- to high-rise multifamily residential structures in the United States currently use little wood per unit floor area installed, because earlier building codes lacked provisions for structural wood use in those types of buildings. However, revisions to the International Building Code allow for increased wood use in the form of mass timber, as structural and fire safety concerns have been addressed through new science-based design standards and through newly specified construction materials and measures. This study used multiple models to describe alternative futures for new construction, mass timber adoption rates, and the associated carbon benefits in higher than three-story buildings in the United States. The use of mass timber, in place of traditional constructions (i.e., structures dominated by concrete and steel), in projected new higher than three-story buildings was shown to provide combined carbon benefits (i.e., global warming mitigation benefits), including avoided embodied carbon emissions due to the substitution of non-wood alternatives and additional biogenic carbon storage in mass timber materials, of between 9.9 and 16.5 million t CO 2 e/yr spanning 50 years, 2020 to 2070. These carbon benefits equate to 12% to 20% of the total U.S. harvested wood products carbon storage for 2020. Future research is needed to understand how greater mass timber adoption leads to changes in forest product markets, land use, and total forest sector carbon.
Journal Article
Chemo-profiling of Purpureocillium lilacinum and Paecilomyces variotii isolates using GC-MS analysis, and evaluation of their metabolites against M. incognita
2024
Nematophagous fungi are the best alternatives to chemical nematicides for managing nematodes considering environmental health. In the current study, activity of metabolites from ten isolates of Purpureocillium lilacinum (Thom) Luangsa-ard ( Hypocreales : Ophiocordycipitaceae ) and two isolates of Paecilomyces variotii Bainier ( Eurotiales : Trichocomaceae ), were examined to inhibit the hatching of Meloidogyne incognita (Kofoid & White) Chitwood ( Tylenchida : Heteroderidae ) eggs. At 100%, 50%, and 25% concentrations, respectively, the culture filtrate of the isolate P . lilacinum 6887 prevented 97.55%, 90.52%, and 62.97% of egg hatching. Out of all the isolates, Pl 6887, Pl 6553, and Pl 2362 showed the greatest results in the hatching inhibition experiment.Gas chromatography-mass spectrometry (GC-MS) analysis revealed a variety of nematicidal compounds from different isolates. A total of seven nematicidal compounds, including four very potent nematicidal fatty acids were found in the isolate Pl 6553. Secondary metabolites of the same isolate possess the highest M . incognita juvenile mortality, i.e., 43.33% and 92% after 48 hrs of treatment at 100 and 200 ppm concentrations, respectively. Significant difference was observed in juvenile mortality percentage among the isolate having highest and lowest nematicidal compounds. Nematicidal fatty acids like myristic and lauric acid were found for the first time in P . lilacinum . Multiple vacuole-like droplets were found inside the unhatched eggs inoculated with the culture filtrate of isolate Pl 6887, and also in the juveniles that perished in the ethyl acetate extract of isolate Pl 6553.
Journal Article