Explore the vast range of titles available.

As droughts become more frequent and more severe under anthropogenic climate change, water stress due to diminished subsurface supplies may threaten the health and function of semi-arid riparian woodlands, which are assumed to be largely groundwater dependent. To better support the management of riparian woodlands under changing climatic conditions, it is essential to understand the sensitivity of riparian woodlands to depth to groundwater (DTG) across space and time. In this study, we examined six stands of riparian woodland along 28 km of the Santa Clara River in southern California. Combining remote sensing data of fractional land cover, based on spectral mixture analysis, with historical groundwater data, we assessed changes in riparian woodland health in response to DTG during the unprecedented 2012–2019 California drought. We observed a coherent ‘brown wave’ of tree mortality, characterized by decreases in healthy vegetation cover and increases in dead/woody vegetation cover, which progressed downstream through the Santa Clara River corridor between 2012 and 2016. We also found consistent, significant relationships between DTG and healthy vegetation cover, and separately between DTG and dead/woody vegetation cover, indicating that woodland health deteriorated in a predictable fashion as the water table declined at different sites and different times. Based on these findings, we conclude that the brown wave of vegetation dieback was likely caused by local changes in DTG associated with the propagation of precipitation deficits into a depleted shallow alluvial aquifer. These factors suggest that semi-arid riparian woodlands are strongly dependent on shallow groundwater availability, which is in turn sensitive to climate forcing.

Premise of the Study Hybridization between previously isolated species or lineages can stimulate invasiveness because of increased genetic diversity and inherited traits facilitating competitive and reproductive potential. We evaluated differences in stand characteristics and sexual and vegetative reproduction among native, introduced, and hybrid Phragmites australis lineages in the southwestern United States. We also assessed the degree of hybridization among lineages and backcrossing of hybrids with parental lineages. Methods Growth and morphological characteristics were measured in native, introduced, and hybrid Phragmites stands to evaluate relative cover and dominance in associated plant communities. Panicles were collected from stands to evaluate germination, dormancy, and differences in seed traits. Seedlings from germination trials were genotyped to determine frequency of crossing and backcrossing among lineages. Key Results Introduced and hybrid Phragmites stands had significantly greater stem and panicle densities than native stands and were more likely to be dominant members of their respective plant communities. Hybrid seed outputs were significantly greater, but hybrid seeds had lower germination rates than those from native and introduced lineages. We detected a novel hybridization event between native and introduced lineages, but found no strong evidence of hybrids backcrossing with parental lineages. Conclusions Hybrid Phragmites in the Southwest exhibits reproductive, genetic, and morphological characteristics from both parental lineages that facilitate dispersal, establishment, and aggressive growth, including high reproductive output, rhizome viability, and aboveground biomass, with smaller seeds and greater genetic diversity than its progenitors. Our results show hybrids can inherit traits that confer invasiveness and provide insight for managing this species complex and other cryptic species with native and introduced variants with potential for intraspecific hybridization.

Drought‐induced groundwater decline and warming associated with climate change are primary threats to dryland riparian woodlands. We used the extreme 2012–2019 drought in southern California as a natural experiment to assess how differences in water‐use strategies and groundwater dependence may influence the drought susceptibility of dryland riparian tree species with overlapping distributions. We analyzed tree‐ring stable carbon and oxygen isotopes collected from two cottonwood species (Populus trichocarpa and P. fremontii) along the semi‐arid Santa Clara River. We also modeled tree source water δ18O composition to compare with observed source water δ18O within the floodplain to infer patterns of groundwater reliance. Our results suggest that both species functioned as facultative phreatophytes that used shallow soil moisture when available but ultimately relied on groundwater to maintain physiological function during drought. We also observed apparent species differences in water‐use strategies and groundwater dependence related to their regional distributions. P. fremontii was constrained to more arid river segments and ostensibly used a greater proportion of groundwater to satisfy higher evaporative demand. P. fremontii maintained ∆13C at pre‐drought levels up until the peak of the drought, when trees experienced a precipitous decline in ∆13C. This response pattern suggests that trees prioritized maintaining photosynthetic processes over hydraulic safety, until a critical point. In contrast, P. trichocarpa showed a more gradual and sustained reduction in ∆13C, indicating that drought conditions induced stomatal closure and higher water use efficiency. This strategy may confer drought avoidance for P. trichocarpa while increasing its susceptibility to anticipated climate warming. Key Points Dryland riparian cottonwoods used shallow soil moisture when available but ultimately relied on groundwater for survival during drought Species had different water‐use strategies related to their distribution along a gradient of increasing aridity with distance from coast Populus trichocarpa appears more susceptible to warming, and P. fremontii more vulnerable to groundwater decline due to high water demand

While hybridization between Native and Introduced Phragmites australis has not been documented across much of North America, it poses an ongoing threat to Native P. australis across its range. This is especially true for native populations in the biologically rich, but sparsely distributed wetlands of the southwest United States, which are among the most imperiled systems in North America. We identified multiple Hybrid P. australis stands in the Las Vegas Wash watershed, NV, a key regional link to the Colorado River basin. Rapid urbanization in this watershed has caused striking changes in water and nutrient inputs and the distribution of wetland habitats has also changed, with urban wetlands expanding but an overall reduction in wetland habitats regionally. Native P. australis has likely been present in the Wash wetland community in low abundance for thousands of years, but today Hybrid and Native plants dominate the shoreline along much of the Wash. In contrast, Introduced P. australis is rare, suggesting that opportunities for novel hybridization events remain uncommon. Hybrid crosses derived from both the native and introduced maternal lineages are widespread, although the conditions that precluded their establishment are unknown and we did not find evidence for backcrossing. Spread of Hybrid plants is likely associated with flooding events as well as restoration activities, including revegetation efforts and construction for erosion control, that have redistributed sediments containing P. australis rhizomes. Downstream escape of Hybrid plants to Lake Mead and wetlands throughout the lower Colorado River basin is of management concern as these Hybrids appear vigorous and could spread rapidly.

The environmental and social impacts of Phragmites australis invasion have been extensively studied in the eastern United States. In the West where the invasion is relatively recent, a lack of information on distributions and spread has limited our ability to manage invasive populations or assess whether native populations will experience a decline similar to that in the East. Between 2006 and 2015, we evaluated the genetic status, distribution, and soil properties (pH, electrical conductivity, and soil texture) of Phragmites stands in wetlands and riparian systems throughout the Southwest. Native (subspecies americanus ), Introduced (haplotype M), and Gulf Coast (subspecies berlandieri ) Phragmites lineages were identified in the survey region, as well as watershed-scale hybridization between the Native and Introduced lineages in southern Nevada. Two Asian haplotypes (P and Q) that were previously not known to occur in North America were found in California. The Native lineage was the most frequent and widespread across the region, with four cpDNA haplotypes (A, B, H, and AR) occurring at low densities in all wetland types. Most Introduced Phragmites stands were in or near major urban centers and associated with anthropogenic disturbance in wetlands and rivers, and we document their spread in the region, which is likely facilitated by transportation and urban development. Soil pH of Native and hybrid stands was higher (averaging 8.3 and 8.6, respectively) than Introduced stands (pH of 7.5) and was the only soil property that differed among lineages. Continued monitoring of all Phragmites lineages in the Southwest will aid in assessing the conservation status of Native populations and developing management priorities for non-native stands.

Abiotic conditions can influence the effect that herbivores have on plant growth. Such biotic and abiotic interactions are of special interest in plant biological control programs because the goal of herbivore suppression of the target weed may not be reached in some abiotic settings. Additionally, target invasive plants typically occur across diverse landscapes raising the possibility that local adaptation to site-specific conditions leads to phenotypic variation that can affect herbivore responses. Here, we used Tamarix, an invasive plant, and its associated biological control agent, Diorhabda carinulata, to investigate how local variation in soil salinity and host plant origin influence interactions between the two taxa. To test if Tamarix was adapted to local conditions, we collected plants from sites with either low or high groundwater salinity, asexually propagated them through multiple generations, and then treated them with their home or reciprocal salinity levels. We found that plants accumulated the most biomass when grown at the salinities of their origin site. The biological control agent, D. carinulata preferred plants grown at source site salinity when given a choice against plants grown in the reciprocal salinity treatment. Although plants compensated for herbivory by regrowing foliage over three defoliation events and maintained similar leaf biomass through regrowth, they ultimately had a reduced basal area and 62% lower root biomass compared to the controls. Thus, herbivory caused a shift in plant allocation of resources from overall growth to compensation, reducing root and stem investment. Overall, D. carinulata caused a significantly greater reduction in total biomass in the high salinity plants than the low salinity ones when grown at their source salinity (averages of 63% and 32% respectively). Thus, the Tamarix biological control program may experience its greatest efficacy in high salinity areas where the impact of the agent is the greatest, likely due to increased water stress and reduced resources to enable regrowth.

This study examined the performance of Poanes viator (Edwards) (Hesperiidae), a native North American skipper, and Rhizedra lutosa (Hübner) (Noctuidae), an introduced moth, reared on native and non-native, invasive lineages of Phragmites australis. Poanes viator is a generalist on monocots and larvae were also fed leaves of Zizania aquatica, a native macrophyte that the skipper commonly uses as a host plant. Larval survival and duration, pupal weight, and pupation time were compared for P. viator feeding on leaf tissue and R. lutosa feeding on rhizomes of either native or introduced plants. We also tested an artificial diet supplemented with P. australis rhizome powder as a potential food for rearing other stalk and rhizome boring Lepidoptera. In experiments using excised plant tissues, some individuals of both species fed and developed to the pupal stage on native and introduced plants, but overall, larval survival rates were low. Plant species/haplotype identity did not cause strong differences in larval survival for either species. However, P. viator larvae only pupated when feeding on native plants (Zizania aquatica and native P. australis haplotypes), whereas R. lutosa successfully pupated on both native and introduced P. australis. Although larval survival was low, 100% of P. viator and 95% of R. lutosa that reached the pupal stage emerged as adults. Rhizedra lutosa larvae fed an artificial diet supplemented with P. australis rhizome powder had significantly greater survival and pupal weights, and shorter pupation times than larvae fed rhizomes only. Several specialist Lepidopteran species are being considered for approval as biological control agents for the non-native P. australis haplotype, and the convenience and increased larval performance make this artificial diet a good alternative for rearing organisms.

Duchenne muscular dystrophy (DMD) is a lethal, progressive muscle wasting disease caused by a loss of sarcolemmal bound dystrophin, which results in the death of the muscle fibers leading to the gradual depletion of skeletal muscle. There is significant evidence demonstrating that increasing levels of the dystrophin-related protein, utrophin, in mouse models results in sarcolemmal bound utrophin and prevents the muscular dystrophy pathology. The aim of this work was to develop a small molecule which increases the levels of utrophin in muscle and thus has therapeutic potential. We describe the in vivo activity of SMT C1100; the first orally bioavailable small molecule utrophin upregulator. Once-a-day daily-dosing with SMT C1100 reduces a number of the pathological effects of dystrophin deficiency. Treatment results in reduced pathology, better muscle physiology leading to an increase in overall strength, and an ability to resist fatigue after forced exercise; a surrogate for the six minute walk test currently recommended as the pivotal outcome measure in human trials for DMD. This study demonstrates proof-of-principle for the use of in vitro screening methods in allowing identification of pharmacological agents for utrophin transcriptional upregulation. The best compound identified, SMT C1100, demonstrated significant disease modifying effects in DMD models. Our data warrant the full evaluation of this compound in clinical trials in DMD patients.

The capacity for plant species or populations to cope with herbivory depends in large part on the complex interactions between resource availability, life history and adaptive strategies to maximize defense and/or tolerance to herbivory. Given these complex interactions, the impacts of repeated herbivory on plant stress and subsequent mortality is often difficult to predict. To better understand relationships between herbivory and environmental condition, we studied the relationship between the non-native shrub/tree tamarisk ( Tamarix spp.) and a specialist herbivore, the northern tamarisk leaf beetle ( Diorhabda carinulata ) released as a biological control agent of Tamarix in the Virgin River watershed in the southwestern United States. The beetle feeds exclusively on Tamarix foliage resulting in complete stand foliage desiccation (i.e. defoliation) that lasts several weeks. Approximately 900 Tamarix plants were surveyed over three consecutive growing seasons for canopy dieback and mortality across 10 sites varying in the number of defoliation events, tree height, soil salinity, soil texture and bulk leaf carbon isotope ratios (δ 13 C). Canopy dieback increased from 27 % by volume in the spring of 2012 to 41 % and 54 % in 2013 and 2014, respectively. Tree mortality increased from 0 % in 2012 to 6 % and 10 % in 2013 and 2014, respectively. Surprisingly, percent canopy dieback was not related to the number of defoliation events that ranged from 2 to 7 across the 10 sites prior to the 2013 growing season. On the other hand, canopy dieback increased with soil salinity in both 2013 ( R 2  = 0.39, F  = 5.07, P  = 0.055) and 2014 ( R 2  = 0.56, F  = 10.26, P  = 0.015). Canopy dieback in 2013 increased with bulk leaf δ 13 C ( R 2  = 0.38, F  = 4.08, P  = 0.078), although δ 13 C also decreased with the number of defoliation events ( R 2  = 0.64, F  = 14.17, P  = 0.0055), suggesting that photosynthetic rate or drought stress (as indicated by leaf δ 13 C) may serve as a poor predictor for Tamarix canopy dieback in response to defoliation. Percent canopy dieback was correlated with shifts in NDVI measured from annual MODIS imagery ( R 2  = 0.61, F  = 12.32, P  = 0.008), demonstrating that the tree surveys reflect site-scale changes in canopy cover. Results show that patterns of Tamarix canopy dieback and subsequent mortality following episodic defoliation by D. carinulata are likely to vary across broad gradients in soil salinity and other abiotic and biotic factors. Documented impacts of this biocontrol agent reported here will aid management efforts aimed at preserving riparian habitat in the short-term with conservation efforts targeting the removal and control of Tamarix over the long term.

Background Extension of prostate cancer beyond the primary site by local invasion or nodal metastasis is associated with poor prognosis. Despite significant research on tumour evolution in prostate cancer metastasis, the emergence and evolution of cancer clones at this early stage of expansion and spread are poorly understood. We aimed to delineate the routes of evolution and cancer spread within the prostate and to seminal vesicles and lymph nodes, linking these to histological features that are used in diagnostic risk stratification. Methods We performed whole-genome sequencing on 42 prostate cancer samples from the prostate, seminal vesicles and lymph nodes of five treatment-naive patients with locally advanced disease. We spatially mapped the clonal composition of cancer across the prostate and the routes of spread of cancer cells within the prostate and to seminal vesicles and lymph nodes in each individual by analysing a total of > 19,000 copy number corrected single nucleotide variants. Results In each patient, we identified sample locations corresponding to the earliest part of the malignancy. In patient 10, we mapped the spread of cancer from the apex of the prostate to the seminal vesicles and identified specific genomic changes associated with the transformation of adenocarcinoma to amphicrine morphology during this spread. Furthermore, we show that the lymph node metastases in this patient arose from specific cancer clones found at the base of the prostate and the seminal vesicles. In patient 15, we observed increased mutational burden, altered mutational signatures and histological changes associated with whole genome duplication. In all patients in whom histological heterogeneity was observed (4/5), we found that the distinct morphologies were located on separate branches of their respective evolutionary trees. Conclusions Our results link histological transformation with specific genomic alterations and phylogenetic branching. These findings have implications for diagnosis and risk stratification, in addition to providing a rationale for further studies to characterise the genetic changes causally linked to morphological transformation. Our study demonstrates the value of integrating multi-region sequencing with histopathological data to understand tumour evolution and identify mechanisms of prostate cancer spread.