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49 result(s) for "Le Gall, Yves"
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Whistles characterisation using artificial intelligence reveals responses of short-beaked common dolphins to a bio-inspired acoustic mitigation device for fishing nets
Understanding cetacean whistles is crucial for assessing their social interactions, behaviours, and responses to anthropic activities. Identifying the various types of whistles present in acoustic recordings is often challenging, but necessary for this purpose. To facilitate this process, we have developed a semi-automated deep learning approach called the “Draw Your Own Contours” (DYOC) method. This is available as an open-source software along with its associated dataset. It utilises YOLOv8m and ResNet18 to identify whistle contours. DYOC was applied to 808 minutes of audio recordings of wild, free-ranging short-beaked common dolphins from the Bay of Biscay, France. It enabled the annotation of 8,730 whistle contours, six times faster than manual annotation. These recordings were associated with observations of dolphin behaviour, the presence of fishing nets, and the activation of the DOLPHINFREE acoustic beacon. Analyses revealed that these variables affected the signal-to-noise ratio, the number of inflections, and the frequency and/or duration of recorded whistles. This study provides the first characterisation of whistle features for a population of short-beaked common dolphins in the Bay of Biscay. The annotation of whistle contours using the DYOC method helped reveal the complex acoustic behaviour of dolphins in response to external variables.
Towards accurate stereo-video based free-surface reconstruction for wave tank experiments
Measuring accurately the shape of the free surface in medium-scale hydrodynamic testing facilities is challenging with conventional wave gauges. To overcome this problem, it is necessary to go towards higher resolution measurement systems. For this purpose, we investigate the ability of stereo-video acquisition systems to reconstruct free surface waves in laboratory conditions. This technique has been proven to give satisfactory results in open sea conditions, although it is dependent on the environmental conditions (weather, solar incidence angle). At sea, the stereo-video reconstruction algorithm makes profit of the short waves generated by the wind in order to correlate the points from the left and right images. The main challenge of adapting this technique to laboratory conditions, i.e. in absence of sun and wind, is to overcome the absence of texture on the free surface. This paper presents recent work aiming at developing a stereo-vision measurement system for laboratory conditions. Our efforts have been devoted to finding an adapted lighting system and generating a texture suitable for the reconstruction algorithm. Different lighting configurations have been tested in order to understand its impact on the reconstructions. For the texture generation, we have investigated different means of generating short surface waves (water droplets, air blowing, circulation current, underwater acoustic emissions) in different experimental facilities. Our conclusions show that it is possible to reconstruct the shape of surface gravity waves in the presence of short surface waves and that the effects of lighting and texture on the quality of the reconstruction are strongly coupled.
The response of sea turtles to vocalizations opens new perspectives to reduce their bycatch
Incidental capture of non-target species poses a pervasive threat to many marine species, with sometimes devastating consequences for both fisheries and conservation efforts. Because of the well-known importance of vocalizations in cetaceans, acoustic deterrents have been extensively used for these species. In contrast, acoustic communication for sea turtles has been considered negligible, and this question has been largely unexplored. Addressing this challenge therefore requires a comprehensive understanding of sea turtles’ responses to sensory signals. In this study, we scrutinized the avenue of auditory cues, specifically the natural sounds produced by green turtles ( Chelonia mydas) in Martinique, as a potential tool to reduce bycatch. We recorded 10 sounds produced by green turtles and identified those that appear to correspond to alerts, flight or social contact between individuals. Subsequently, these turtle sounds—as well synthetic and natural (earthquake) sounds—were presented to turtles in known foraging areas to assess the behavioral response of green turtles to these sounds. Our data highlighted that the playback of sounds produced by sea turtles was associated with alert or increased the vigilance of individuals. This therefore suggests novel opportunities for using sea turtle sounds to deter them from fishing gear or other potentially harmful areas, and highlights the potential of our research to improve sea turtles populations’ conservation.
Behavioural Responses of Common Dolphins Delphinus delphis to a Bio-Inspired Acoustic Device for Limiting Fishery By-Catch
By-catch is the most direct threat to marine mammals globally. Acoustic repellent devices (pingers) have been developed to reduce dolphin by-catch. However, mixed results regarding their efficiency have been reported. Here, we present a new bio-inspired acoustic beacon, emitting returning echoes from the echolocation clicks of a common dolphin ‘Delphinus delphis’ from a fishing net, to inform dolphins of its presence. Using surface visual observations and the automatic detection of echolocation clicks, buzzes, burst-pulses and whistles, we assessed wild dolphins’ behavioural responses during sequential experiments (i.e., before, during and after the beacon’s emission), with or without setting a net. When the device was activated, the mean number of echolocation clicks and whistling time of dolphins significantly increased by a factor of 2.46 and 3.38, respectively (p < 0.01). Visual surface observations showed attentive behaviours of dolphins, which kept a distance of several metres away from the emission source before calmly leaving. No differences were observed among sequences for buzzes/burst-pulses. Our results highlight that this prototype led common dolphins to echolocate more and communicate differently, and it would favour net detection. Complementary tests of the device during the fishing activities of professional fishermen should further contribute to assessment of its efficiency.
High-resolution acoustic recordings of wild free-ranging short-beaked common dolphins for etho-acoustical and repertoire studies
Dolphins are highly vocal cetaceans with a complex acoustic repertoire. These marine mammals rely heavily on sound for critical activities: echolocation clicks for navigation and prey detection, whistles for social communication, and pulsed sounds for less well-documented purposes. Understanding their acoustic behaviour is essential for insights into their ecology, social structure, and responses to anthropogenic noise. However, to date, there has been a lack of open-access datasets of acoustic recordings of wild free-ranging short-beaked common dolphins (Delphinus delphis) coupled with observational data. Here, we present a new dataset (https://doi.org/10.5281/zenodo.14637674, Lehnhoff, 2025a) of high-resolution acoustic recordings of (D. delphis) observed in various behavioural states, including foraging, travelling, socializing, milling, and attraction to the boat. The dataset was collected in the northern Bay of Biscay, France, in the summers of 2020 to 2022 during surveys conducted as part of the DOLPHINFREE project. Audio recordings were made during opportunistic encounters using two devices: a single high-quality hydrophone (sampling rate 512 kHz and bit depth 32 bits) and a compact array of four hydrophones (256 to 512 kHz and 16 to 24 bits) for localization purposes. The dataset comprises over 400 min of unedited audio recordings of D. delphis accompanied by visual observations. In total, we identified about 68 000 echolocation clicks, 4600 whistle contours, and more than 350 pulsed sounds. This comprehensive resource is invaluable for detailed studies of the acoustic repertoire of (D. delphis), coupled with behavioural studies or analyses of the directionality of their acoustic emissions.
La DGFIP, autorité de certification des fonds européens, à travers l’exemple de la mission exercée par la DRFIP de Bretagne et d’Ille et Vilaine
Depuis 2007, la DGFIP exerce la mission d’autorité de certification de certains fonds européens (FEDER et FSE) ; cette désignation a été renouvelée pour la période 2014-2020. L’exercice de cette mission, à enjeu financier important, s’inscrit dans le contexte d’une exigence accrue de transparence et de solidité financière des processus de gestion des fonds européens. Sa mise en oeuvre au niveau régional, sous le contrôle de la Commission, s’inscrit dans une démarche partenariale avec les régions et dans un cadre réglementaire et méthodologique précis.
Long-Term Monitoring of Green Turtle Nesting on Tromelin Island Demonstrates Stable Reproduction and Population Parameters
Situated about 500 km off the Malagasy east coast, the island of Tromelin is a key nesting site for the endangered green turtle, Chelonia mydas, in the south Western Indian Ocean. Nesting turtles found in this isolated island have been closely monitored since the 1970s, but the most recent estimates of nesting parameters date from 1986. Using mark–recapture data, track counts, and nests monitoring data collected over the 2009/2010 nesting peak, reproductive characteristics, population size, and offspring production were updated and discussed in the light of the track survey undertaken from 1986 to 2010. Females showed a consistent reproductive behaviour compared with previous studies in terms of clutch frequency (2.75 ± 1.46) and nesting success (0.65). Nest indices such as hatching success (0.76 ± 0.25) and emergence success (0.61 ± 0.33) were also included in the range of values calculated in the 1980s. Importantly, the estimated number of nesters and production in eggs and hatchlings were similar to older estimates, suggesting a relative demographic stability. For the 2009/2010 year-long nesting season, the size of the nesting population was estimated at about 1500 individuals, which produced around 480,900 eggs (± 103,900), resulting in 289,200 emerging hatchlings (± 152,000). These results are promising and support the effectiveness of conservation measures undertaken in the Iles Eparses, but further comparable monitoring is needed in the coming years to confirm the stability in Tromelin's green turtle nesting population.
Polymorphisms in the HFE Gene
Hereditary hemochromatosis is an autosomal recessive disease characterized by progressive iron overload. Recently, a candidate gene named HFE was isolated on the short arm of the chromosome 6 within which two mutations were identified: C282Y and H63D. To date, only homozygosity for the C282Y mutation is considered as a diagnostic criterion of hemochromatosis. 7.6% of the patients studied in our laboratory did not carry two copies of the C282Y mutation. On the other hand, a dysmetabolic iron overload syndrome has recently been described and the search for the C282Y and H63D mutations revealed that none of the patients was homozygous for C282Y while 67% exhibited one of the mutations. The possibility of a new mutation in the HFE gene has been raised to explain the disease in the remaining patients, as well as, in the few hemochromatotic patients without two copies of the C282Y mutation. The aim of this study was to search for new mutations in the HFE gene in 16 such patients. Direct sequencing of exons and 3 introns did not reveal any new mutation but identified a few polymorphisms.
Behavioural Responses of Common Dolphins IDelphinus delphis/I to a Bio-Inspired Acoustic Device for Limiting Fishery By-Catch
By-catch is the most direct threat to marine mammals globally. Acoustic repellent devices (pingers) have been developed to reduce dolphin by-catch. However, mixed results regarding their efficiency have been reported. Here, we present a new bio-inspired acoustic beacon, emitting returning echoes from the echolocation clicks of a common dolphin ‘Delphinus delphis’ from a fishing net, to inform dolphins of its presence. Using surface visual observations and the automatic detection of echolocation clicks, buzzes, burst-pulses and whistles, we assessed wild dolphins’ behavioural responses during sequential experiments (i.e., before, during and after the beacon’s emission), with or without setting a net. When the device was activated, the mean number of echolocation clicks and whistling time of dolphins significantly increased by a factor of 2.46 and 3.38, respectively (p < 0.01). Visual surface observations showed attentive behaviours of dolphins, which kept a distance of several metres away from the emission source before calmly leaving. No differences were observed among sequences for buzzes/burst-pulses. Our results highlight that this prototype led common dolphins to echolocate more and communicate differently, and it would favour net detection. Complementary tests of the device during the fishing activities of professional fishermen should further contribute to assessment of its efficiency.
Identification of three novel mutations in the dystrophin gene detected by the heteroduplex/SSCA screening procedure
Duchenne muscular dystrophy (DMD) and Becker muscular dystrophy (BMD) are X‐linked neuromuscular disorders associated with alterations in the dystrophin gene. Analysis of 45 DMD/BMD patients has identified 18 patients with no deletion in the dystrophin gene. Heteroduplex analysis (HD), single strand conformation analysis (SSCA), and subsequent sequencing, identified five mutations and nine polymorphisms. Three out of the 5 mutations (780C>G, 2501‐1g→t, 9812ˆ9813ins9800‐9812) are first reported here. Furthermore we compare the relative efficiencies of the two alternatives methods (HD and SSCA) for screening sequence alterations. © 1998 Wiley‐Liss, Inc.