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"Lee, R"
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The grand challenge of cellulosic biofuels
2017
Why cellulosic biofuels have fallen short of expectations and what we can do about it.
Journal Article
Selecting CMIP5 GCMs for downscaling over multiple regions
2015
The unprecedented availability of 6-hourly data from a multi-model GCM ensemble in the CMIP5 data archive presents the new opportunity to dynamically downscale multiple GCMs to develop high-resolution climate projections relevant to detailed assessment of climate vulnerability and climate change impacts. This enables the development of high resolution projections derived from the same set of models that are used to characterise the range of future climate changes at the global and large-scale, and as assessed in the IPCC AR5. However, the technical and human resource required to dynamically-downscale the full CMIP5 ensemble are significant and not necessary if the aim is to develop scenarios covering a representative range of future climate conditions relevant to a climate change risk assessment. This paper illustrates a methodology for selecting from the available CMIP5 models in order to identify a set of 8–10 GCMs for use in regional climate change assessments. The selection focuses on their suitability across multiple regions—Southeast Asia, Europe and Africa. The selection (a) avoids the inclusion of the least realistic models for each region and (b) simultaneously captures the maximum possible range of changes in surface temperature and precipitation for three continental-scale regions. We find that, of the CMIP5 GCMs with 6-hourly fields available, three simulate the key regional aspects of climate sufficiently poorly that we consider the projections from those models ‘implausible’ (
MIROC
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ESM, MIROC
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ESM
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CHEM,
and
IPSL
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CM5B
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LR
). From the remaining models, we demonstrate a selection methodology which avoids the poorest models by including them in the set only if their exclusion would significantly reduce the range of projections sampled. The result of this process is a set of models suitable for using to generate downscaled climate change information for a consistent multi-regional assessment of climate change impacts and adaptation.
Journal Article
The tangled tale of Kīlauea’s 2018 eruption as told by geochemical monitoring
2019
Real-time monitoring of volcanic eruptions involving caldera-forming events are rare (see the Perspective by Sigmundsson). Anderson et al. used several types of geophysical observations to track the caldera-forming collapse at the top of Kīlauea Volcano, Hawai'i, during the 2018 eruption. Gansecki et al. used near–real-time lava composition analysis to determine when magma shifted from highly viscous, slow-moving lava to low-viscosity, fast-moving lava. Patrick et al. used a range of geophysical tools to connect processes at the summit to lava rates coming out of far-away fissures. Together, the three studies improve caldera-collapse models and may help improve real-time hazard responses. Science , this issue p. eaaz0147 , p. eaay9070 ; p. eaaz1822 ; see also p. 1200 Near–real-time chemical monitoring of lava during the Kīlauea eruption allowed forecasting of high-temperature eruptions. Changes in magma chemistry that affect eruptive behavior occur during many volcanic eruptions, but typical analytical techniques are too slow to contribute to hazard monitoring. We used rapid energy-dispersive x-ray fluorescence analysis to measure diagnostic elements in lava samples within a few hours of collection during the 2018 Kīlauea eruption. The geochemical data provided important information for field crews and civil authorities in advance of changing hazards during the eruption. The appearance of hotter magma was recognized several days before the onset of voluminous eruptions of fast-moving flows that destroyed hundreds of homes. We identified, in near real-time, interactions between older, colder, stored magma—including the unexpected eruption of andesite—and hotter magma delivered during dike emplacement.
Journal Article
Is it that difficult?
2022
The author expressed concern regarding the lack of ability young dentists have in conducting research, stating: 'they [young dentists] are never taught to collect data for an audit, or how to carry out a research project'. Early exposure to research through a previous degree allows an individual to enhance their skills in critically analysing data, formulating research questions, applying findings from literature, and understanding ethical and governance issues in research. [...]the author mentioned the elements that make up a 'good' portfolio including academic achievements, but stated 'young dentists will inevitably miss out on opportunities as a result of not knowing where to look for them'.
Journal Article
Direction-Specific Interactions Control Crystal Growth by Oriented Attachment
by
Li, Dongsheng
,
Nielsen, Michael H.
,
Banfield, Jillian F.
in
Attachment
,
Coalescence
,
Cross-disciplinary physics: materials science; rheology
2012
The oriented attachment of molecular clusters and nanoparticles in solution is now recognized as an important mechanism of crystal growth in many materials, yet the alignment process and attachment mechanism have not been established. We performed high-resolution transmission electron microscopy using a fluid cell to directly observe oriented attachment of iron oxyhydroxide nanoparticles. The particles undergo continuous rotation and interaction until they find a perfect lattice match. A sudden jump to contact then occurs over less than 1 nanometer, followed by lateral atom-by-atom addition initiated at the contact point. Interface elimination proceeds at a rate consistent with the curvature dependence of the Gibbs free energy. Measured translational and rotational accelerations show that strong, highly direction-specific interactions drive crystal growth via oriented attachment.
Journal Article
Prolonged Late Permian-Early Triassic hyperthermal: failure of climate regulation?
2018
The extreme warmth associated with the mass extinction at the Permian-Triassic boundary was likely produced by a rapid build-up of carbon dioxide in the atmosphere from the eruption and emplacement of the Siberian Traps. In comparison to another hyperthermal event, the Palaeocene-Eocene Thermal Maximum, the Permian-Triassic event, while leaving a similar carbon isotope record, likely had larger amounts of CO2 emitted and did not follow the expected time scale of climate recovery. The quantities and rates of CO2 emission likely exhausted the capacity of the long-term climate regulator associated with silicate weathering. Failure was enhanced by slow rock uplift and high continentality associated with the supercontinental phase of global tectonics at the time of the Siberian Traps eruption.
This article is part of a discussion meeting issue 'Hyperthermals: rapid and extreme global warming in our geological past'.
Journal Article
Oxidative Stress and Metabolic Perturbations in Wooden Breast Disorder in Chickens
by
Abasht, Behnam
,
Lee, William R.
,
Mutryn, Marie F.
in
Amino Acids - metabolism
,
Animal tissues
,
Animals
2016
This study was conducted to characterize metabolic features of the breast muscle (pectoralis major) in chickens affected with the Wooden Breast myopathy. Live birds from two purebred chicken lines and one crossbred commercial broiler population were clinically examined by manual palpation of the breast muscle (pectoralis major) at 47-48 days of age. Metabolite abundance was determined by gas chromatography/mass spectrometry (GC/MS) and liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) using breast muscle tissue samples from 16 affected and 16 unaffected chickens. Muscle glycogen content was also quantified in breast muscle tissue samples from affected and unaffected chickens. In total, levels of 140 biochemicals were significantly different (FDR<0.1 and fold-change A/U>1.3 or <0.77) between affected and unaffected chickens. Glycogen content measurements were considerably lower (1.7-fold) in samples taken from Wooden Breast affected birds when compared with samples from unaffected birds. Affected tissues exhibited biomarkers related to increased oxidative stress, elevated protein levels, muscle degradation, and altered glucose utilization. Affected muscle also showed elevated levels of hypoxanthine, xanthine, and urate molecules, the generation of which can contribute to altered redox homeostasis. In conclusion, our findings show that Wooden Breast affected tissues possess a unique metabolic signature. This unique profile may identify candidate biomarkers for diagnostic utilization and provide mechanistic insight into altered biochemical processes contributing to tissue hardening associated with the Wooden Breast myopathy in commercial chickens.
Journal Article
The rise of atmospheric oxygen
2008
More than 40 years of analysis and of theoretical development have yet to produce a definitive picture of the Earth's early history. But now clues from ancient rocks are helping to produce a coherent picture of how Earth's atmosphere changed from one that was almost devoid of oxygen to one that is one-fifth oxygen.
Journal Article