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result(s) for
"Li, Minzan"
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Banana Fusarium Wilt Disease Detection by Supervised and Unsupervised Methods from UAV-Based Multispectral Imagery
by
Ba, Yuxuan
,
Zhang, Muqing
,
Li, Xiuhua
in
Algorithms
,
Artificial neural networks
,
Back propagation networks
2022
Banana Fusarium wilt (BFW) is a devastating disease with no effective cure methods. Timely and effective detection of the disease and evaluation of its spreading trend will help farmers in making right decisions on plantation management. The main purpose of this study was to find the spectral features of the BFW-infected canopy and build the optimal BFW classification models for different stages of infection. A RedEdge-MX camera mounted on an unmanned aerial vehicle (UAV) was used to collect multispectral images of a banana plantation infected with BFW in July and August 2020. Three types of spectral features were used as the inputs of classification models, including three-visible-band images, five-multispectral-band images, and vegetation indices (VIs). Four supervised methods including Support Vector Machine (SVM), Random Forest (RF), Back Propagation Neural Networks (BPNN) and Logistic Regression (LR), and two unsupervised methods including Hotspot Analysis (HA) and Iterative Self-Organizing Data Analysis Technique Algorithm (ISODATA) were adopted to detect the BFW-infected canopies. Comparing to the healthy canopies, the BFW-infected canopies had higher reflectance in the visible region, but lower reflectance in the NIR region. The classification results showed that most of the supervised and unsupervised methods reached excellent accuracies. Among all the supervised methods, RF based on the five-multispectral-band was considered as the optimal model, with higher overall accuracy (OA) of 97.28% and faster running time of 22 min. For the unsupervised methods, HA reached high and balanced OAs of more than 95% based on the selected VIs derived from the red and NIR band, especially for WDRVI, NDVI, and TDVI. By comprehensively evaluating the classification results of different metrics, the unsupervised method HA was recommended for BFW recognition, especially in the late stage of infection; the supervised method RF was recommended in the early stage of infection to reach a slightly higher accuracy. The results found in this study could give advice for banana plantation management and provide approaches for plant disease detection.
Journal Article
Comparison of Soil Total Nitrogen Content Prediction Models Based on Vis-NIR Spectroscopy
2020
Visible-near-infrared spectrum (Vis-NIR) spectroscopy technology is one of the most important methods for non-destructive and rapid detection of soil total nitrogen (STN) content. In order to find a practical way to build STN content prediction model, three conventional machine learning methods and one deep learning approach are investigated and their predictive performances are compared and analyzed by using a public dataset called LUCAS Soil (19,019 samples). The three conventional machine learning methods include ordinary least square estimation (OLSE), random forest (RF), and extreme learning machine (ELM), while for the deep learning method, three different structures of convolutional neural network (CNN) incorporated Inception module are constructed and investigated. In order to clarify effectiveness of different pre-treatments on predicting STN content, the three conventional machine learning methods are combined with four pre-processing approaches (including baseline correction, smoothing, dimensional reduction, and feature selection) are investigated, compared, and analyzed. The results indicate that the baseline-corrected and smoothed ELM model reaches practical precision (coefficient of determination (R2) = 0.89, root mean square error of prediction (RMSEP) = 1.60 g/kg, and residual prediction deviation (RPD) = 2.34). While among three different structured CNN models, the one with more 1 × 1 convolutions preforms better (R2 = 0.93; RMSEP = 0.95 g/kg; and RPD = 3.85 in optimal case). In addition, in order to evaluate the influence of data set characteristics on the model, the LUCAS data set was divided into different data subsets according to dataset size, organic carbon (OC) content and countries, and the results show that the deep learning method is more effective and practical than conventional machine learning methods and, on the premise of enough data samples, it can be used to build a robust STN content prediction model with high accuracy for the same type of soil with similar agricultural treatment.
Journal Article
Application of Color Featuring and Deep Learning in Maize Plant Detection
2020
Maize plant detection was conducted in this study with the goals of target fertilization and reduction of fertilization waste in weed spots and gaps between maize plants. The methods used included two types of color featuring and deep learning (DL). The four color indices used were excess green (ExG), excess red (ExR), ExG minus ExR, and the hue value from the HSV (hue, saturation, and value) color space, while the DL methods used were YOLOv3 and YOLOv3_tiny. For practical application, this study focused on performance comparison in detection accuracy, robustness to complex field conditions, and detection speed. Detection accuracy was evaluated by the resulting images, which were divided into three categories: true positive, false positive, and false negative. The robustness evaluation was performed by comparing the average intersection over union of each detection method across different sub–datasets—namely original subset, blur processing subset, increased brightness subset, and reduced brightness subset. The detection speed was evaluated by the indicator of frames per second. Results demonstrated that the DL methods outperformed the color index–based methods in detection accuracy and robustness to complex conditions, while they were inferior to color feature–based methods in detection speed. This research shows the application potential of deep learning technology in maize plant detection. Future efforts are needed to improve the detection speed for practical applications.
Journal Article
Dynamic Influence Elimination and Chlorophyll Content Diagnosis of Maize Using UAV Spectral Imagery
2020
In order to improve the diagnosis accuracy of chlorophyll content in maize canopy, the remote sensing image of maize canopy with multiple growth stages was acquired by using an unmanned aerial vehicle (UAV) equipped with a spectral camera. The dynamic influencing factors of the canopy multispectral images of maize were removed by using different image segmentation methods. The chlorophyll content of maize in the field was diagnosed. The crop canopy spectral reflectance, coverage, and texture information are combined to discuss the different segmentation methods. A full-grown maize canopy chlorophyll content diagnostic model was created on the basis of the different segmentation methods. Results showed that different segmentation methods have variations in the extraction of maize canopy parameters. The wavelet segmentation method demonstrated better advantages than threshold and ExG index segmentation methods. This method segments the soil background, reduces the texture complexity of the image, and achieves satisfactory results. The maize canopy multispectral band reflectance and vegetation index were extracted on the basis of the different segmentation methods. A partial least square regression algorithm was used to construct a full-grown maize canopy chlorophyll content diagnostic model. The result showed that the model accuracy was low when the image background was not removed (Rc2 (the determination coefficient of calibration set) = 0.5431, RMSEF (the root mean squared error of forecast) = 4.2184, MAE (the mean absolute error) = 3.24; Rv2 (the determination coefficient of validation set) = 0.5894, RMSEP (the root mean squared error of prediction) = 4.6947, and MAE = 3.36). The diagnostic accuracy of the chlorophyll content could be improved by extracting the maize canopy through the segmentation method, which was based on the wavelet segmentation method. The maize canopy chlorophyll content diagnostic model had the highest accuracy (Rc2 = 0.6638, RMSEF = 3.6211, MAE = 2.89; Rv2 = 0.6923, RMSEP = 3.9067, and MAE = 3.19). The research can provide a feasible method for crop growth and nutrition monitoring on the basis of the UAV platform and has a guiding significance for crop cultivation management.
Journal Article
A New Coupled Elimination Method of Soil Moisture and Particle Size Interferences on Predicting Soil Total Nitrogen Concentration through Discrete NIR Spectral Band Data
2021
Rapid and accurate measurement of high-resolution soil total nitrogen (TN) information can promote variable rate fertilization, protect the environment, and ensure crop yields. Many scholars focus on exploring the rapid TN detection methods and corresponding soil sensors based on spectral technology. However, soil spectra are easily disturbed by many factors, especially soil moisture and particle size. Real-time elimination of the interferences of these factors is necessary to improve the accuracy and efficiency of measuring TN concentration in farmlands. Although, many methods can be used to eliminate soil moisture and particle size effects on the estimation of soil parameters using continuum spectra. However, the discrete NIR spectral band data can be completely different in the band attribution with continuum spectra, that is, it does not have continuity in the sense of spectra. Thus, relevant elimination methods of soil moisture and particle size effects on continuum spectra do not apply to the discrete NIR spectral band data. To solve this problem, in this study, moisture absorption correction index (MACI) and particle size correction index (PSCI) methods were proposed to eliminate the interferences of soil moisture and particle size, respectively. Soil moisture interference was decreased by normalizing the original spectral band data into standard spectral band data, on the basis of the strong soil moisture absorption band at 1450 nm. For the PSCI method, characteristic bands of soil particle size were identified to be 1361 and 1870 nm firstly. Next, normalized index Np, which calculated wavelengths of 1631 and 1870 nm, was proposed to eliminate soil particle size interference on discrete NIR spectral band data. Finally, a new coupled elimination method of soil moisture and particle size interferences on predicting TN concentration through discrete NIR spectral band data was proposed and evaluated. The six discrete spectral bands (1070, 1130, 1245, 1375, 1550, and 1680 nm) used in the on-the-go detector of TN concentration were selected to verify the new method. Field tests showed that the new coupled method had good effects on eliminating interferences of soil moisture and soil particle size.
Journal Article
Optimal fertigation for high yield and fruit quality of greenhouse strawberry
2020
Nitrogen (N), phosphorus (P), potassium (K), and water are four crucial factors that have significant effects on strawberry yield and fruit quality. We used a 11 that involved 36 treatments with five levels of each of the four variables (N, P, and K fertilizers and water) to optimize fertilization and water combination for high yield and quality. Moreover, we used the SSC/TA ratio (the ratio of soluble solid content to titratable acid) as index of quality. Results showed that N fertilizer was the most important factor, followed by water and P fertilizer, and the N fertilizer had significant effect on yield and SSC/TA ratio. By contrast, the K fertilizer had significant effect only on yield. N×K fertilizer interacted significantly on yield, whereas the other interactions among the four factors had no significant effects on yield or SSC/TA ratio. The effects of the four factors on yield and SSC/TA ratio were ranked as N fertilizer > water > K fertilizer > P fertilizer and N fertilizer > P fertilizer > water > K fertilizer, respectively. The yield and SSC/TA ratio increased when NPK fertilizer and water increased, but then decreased when excessive NPK fertilizer and water were applied. The optimal fertilizer and water combination were 22.28-24.61 g plant-1 Ca (NO3)2·4H2O, 1.75-2.03 g plant-1 NaH2PO4, 12.41-13.91 g plant-1 K2SO4, and 12.00-13.05 L water plant-1 for yields of more than 110 g plant-1 and optimal SSC/TA ratio of 8.5-14.
Journal Article
Growth Stages Classification of Potato Crop Based on Analysis of Spectral Response and Variables Optimization
2020
Potato is the world’s fourth-largest food crop, following rice, wheat, and maize. Unlike other crops, it is a typical root crop with a special growth cycle pattern and underground tubers, which makes it harder to track the progress of potatoes and to provide automated crop management. The classification of growth stages has great significance for right time management in the potato field. This paper aims to study how to classify the growth stage of potato crops accurately on the basis of spectroscopy technology. To develop a classification model that monitors the growth stage of potato crops, the field experiments were conducted at the tillering stage (S1), tuber formation stage (S2), tuber bulking stage (S3), and tuber maturation stage (S4), respectively. After spectral data pre-processing, the dynamic changes in chlorophyll content and spectral response during growth were analyzed. A classification model was then established using the support vector machine (SVM) algorithm based on spectral bands and the wavelet coefficients obtained from the continuous wavelet transform (CWT) of reflectance spectra. The spectral variables, which include sensitive spectral bands and feature wavelet coefficients, were optimized using three selection algorithms to improve the classification performance of the model. The selection algorithms include correlation analysis (CA), the successive projection algorithm (SPA), and the random frog (RF) algorithm. The model results were used to compare the performance of various methods. The CWT-SPA-SVM model exhibited excellent performance. The classification accuracies on the training set (Atrain) and the test set (Atest) were respectively 100% and 97.37%, demonstrating the good classification capability of the model. The difference between the Atrain and accuracy of cross-validation (Acv) was 1%, which showed that the model has good stability. Therefore, the CWT-SPA-SVM model can be used to classify the growth stages of potato crops accurately. This study provides an important support method for the classification of growth stages in the potato field.
Journal Article
Improving In-Situ Estimation of Soil Profile Properties Using a Multi-Sensor Probe
by
Veum, Kristen S.
,
Li, Minzan
,
Pei, Xiaoshuai
in
calcium
,
calibration
,
cation exchange capacity
2019
Optical diffuse reflectance spectroscopy (DRS) has been used for estimating soil physical and chemical properties in the laboratory. In-situ DRS measurements offer the potential for rapid, reliable, non-destructive, and low cost measurement of soil properties in the field. In this study, conducted on two central Missouri fields in 2016, a commercial soil profile instrument, the Veris P4000, acquired visible and near-infrared (VNIR) spectra (343–2222 nm), apparent electrical conductivity (ECa), cone index (CI) penetrometer readings, and depth data, simultaneously to a 1 m depth using a vertical probe. Simultaneously, soil core samples were obtained and soil properties were measured in the laboratory. Soil properties were estimated using VNIR spectra alone and in combination with depth, ECa, and CI (DECS). Estimated soil properties included soil organic carbon (SOC), total nitrogen (TN), moisture, soil texture (clay, silt, and sand), cation exchange capacity (CEC), calcium (Ca), magnesium (Mg), potassium (K), and pH. Multiple preprocessing techniques and calibration methods were applied to the spectral data and evaluated. Calibration methods included partial least squares regression (PLSR), neural networks, regression trees, and random forests. For most soil properties, the best model performance was obtained with the combination of preprocessing with a Gaussian smoothing filter and analysis by PLSR. In addition, DECS improved estimation of silt, sand, CEC, Ca, and Mg over VNIR spectra alone; however, the improvement was more than 5% only for Ca. Finally, differences in estimation accuracy were observed between the two fields despite them having similar soils, with one field demonstrating better results for all soil properties except silt. Overall, this study demonstrates the potential for in-situ estimation of profile soil properties using a multi-sensor approach, and provides suggestions regarding the best combination of sensors, preprocessing, and modeling techniques for in-situ estimation of profile soil properties.
Journal Article
Detection of Canopy Chlorophyll Content of Corn Based on Continuous Wavelet Transform Analysis
2020
The content of chlorophyll, an important substance for photosynthesis in plants, is an important index used to characterize the photosynthetic rate and nutrient grade of plants. The real-time rapid acquisition of crop chlorophyll content is of great significance for guiding fine management and differentiated fertilization in the field. This study used the method of continuous wavelet transform (CWT) to process the collected visible and near-infrared spectra of a corn canopy. This task was conducted to extract the valuable information in the spectral data and improve the sensitivity of chlorophyll content assessment. First, a Savitzky–Golay filter and standard normal variable processing were applied to the spectral data to eliminate the influence of random noise and limit drift on spectral reflectance. Second, CWT was performed on the spectral reflection curve with 10 frequency scales to obtain the wavelet energy coefficient of the spectral data. The characteristic bands related to chlorophyll content in the spectral data and the wavelet energy coefficients were screened using the maximum correlation coefficient and the local correlation coefficient extrema, respectively. A partial least-square regression model was established. Results showed that the characteristic bands selected via local correlation coefficient extrema in a wavelet energy coefficient created a detection model with optimal accuracy. The determination coefficient (Rc2) of the calibration set was 0.7856, and the root-mean-square error (RMSE) of the calibration set (RMSEC) was 3.0408. The determination coefficient (Rv2) of the validation set is was 0.7364, and the RMSE of the validation set (RMSEV) was 3.3032. Continuous wavelet transform is a process of data dimension enhancement which can effectively extract the sensitive variables from spectral datasets and improve the detection accuracy of models.
Journal Article
Landsat 8 and Sentinel-2 Fused Dataset for High Spatial-Temporal Resolution Monitoring of Farmland in China’s Diverse Latitudes
2023
Crop growth and development exhibit high temporal heterogeneity. It is crucial to capture the dynamic characteristics of crop growth using intensive time-series data. However, single satellites are limited by revisit cycles and weather conditions to provide dense time-series data for earth observations. However, up until now, there has been no proposed remote sensing fusion product that offers high spatial-temporal resolution specifically for farmland monitoring. Therefore, focusing on the demands of farmland remote sensing monitoring, identifying quantitative conversion relationships between multiple sensors, and providing high spatial-temporal resolution products is the first step that needs to be addressed. In this study, a fused Landsat 8 (L8) Operational Land Imager (OLI) and Sentinel-2 (S-2) multi-spectral instruments (MSI) data product for regional monitoring of farmland at high, mid, and low latitudes in China is proposed. Two image pairs for each study area covering different years were acquired from simultaneous transits of L8 OLI and S-2 MSI sensors. Then, the isolation forest (iForest) algorithm was employed to remove the anomalous pixels of image pairs and eliminate the influence of anomalous data on the conversion relationships. Subsequently, the adjustment coefficients for multi-source sensors at mixed latitudes with high spatial resolution were obtained using an ordinary least squares regression method. Finally, the L8-S-2 fused dataset based on the adjustment coefficients is proposed, which is suitable for different latitude farming areas in China. The results showed that the iForest algorithm could effectively improve the correlation between the corresponding spectral bands of the two sensors at a spatial resolution of 10 m. After the removal of anomalous pixels, excellent correlation and consistency were obtained in three study areas, and the Pearson correlation coefficients between the corresponding spectral bands almost all exceeded 0.88. Furthermore, we mixed the six image pairs of the three latitudes to obtain the adjustment coefficients derived for integrated L8 and S-2 data with high-spatial-resolution. The significance and accuracy quantification of the adjustment coefficients were thoroughly examined from three dimensions: qualitative and quantitative analyses, and spatial heterogeneity assessment. The obtained results were highly satisfactory, affirming the validity and precision of the adjustment coefficients. Finally, we applied the adjustment coefficients to crop monitoring in three latitudes. The normalized difference vegetation index (NDVI) time-series curves drawn by the integrated dataset could accurately describe the cropping system and capture the intensity changes of crop growth within the high, middle, and low latitudes of China. This study provides valuable insights into enhancing the application of multi-source remote sensing satellite data for long-term, continuous quantitative inversion of surface parameters and is of great significance for crop remote sensing monitoring.
Journal Article