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"Li, Weibo"
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Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors
2017
Blood contains many types of cells, including many immune system components. Immune cells used to be characterized by marker-based assays, but now classification relies on the genes that cells express. Villani
et al.
used deep sequencing at the single-cell level and unbiased clustering to define six dendritic cell and four monocyte populations. This refined analysis has identified, among others, a previously unknown dendritic cell population that potently activates T cells. Further cell culture revealed possible differentiation progenitors within the different cell populations.
Science
, this issue p.
eaah4573
Discovery of additional immune cell subtypes will help identify functions and immune monitoring during disease.
Dendritic cells (DCs) and monocytes play a central role in pathogen sensing, phagocytosis, and antigen presentation and consist of multiple specialized subtypes. However, their identities and interrelationships are not fully understood. Using unbiased single-cell RNA sequencing (RNA-seq) of ~2400 cells, we identified six human DCs and four monocyte subtypes in human blood. Our study reveals a new DC subset that shares properties with plasmacytoid DCs (pDCs) but potently activates T cells, thus redefining pDCs; a new subdivision within the CD1C
+
subset of DCs; the relationship between blastic plasmacytoid DC neoplasia cells and healthy DCs; and circulating progenitor of conventional DCs (cDCs). Our revised taxonomy will enable more accurate functional and developmental analyses as well as immune monitoring in health and disease.
Journal Article
Effects of motor imagery based brain-computer interface on upper limb function and attention in stroke patients with hemiplegia: a randomized controlled trial
by
Liu, Xiaolu
,
Lv, Peiyuan
,
Li, Weibo
in
Alzheimer's disease
,
Attention
,
Attention deficit hyperactivity disorder
2023
Background
Seeking positive and comprehensive rehabilitation methods after stroke is an urgent problem to be solved, which is very important to improve the dysfunction of stroke. The aim of this study was to investigate the effects of motor imagery-based brain-computer interface training (MI-BCI) on upper limb function and attention in stroke patients with hemiplegia.
Methods
Sixty stroke patients with impairment of upper extremity function and decreased attention were randomly assigned to the control group (CR group) or the experimental group (BCI group) in a 1:1 ratio. Patients in the CR group received conventional rehabilitation. Patients in the BCI group received 20 min of MI-BCI training five times a week for 3 weeks (15 sessions) in addition to conventional rehabilitation. The primary outcome measures were the changes in Fugl-Meyer Motor Function Assessment of Upper Extremities (FMA-UE) and Attention Network Test (ANT) from baseline to 3 weeks.
Results
About 93% of the patients completed the allocated training. Compared with the CR group, among those in the BCI group, FMA-UE was increased by 8.0 points (95%CI, 5.0 to 10.0;
P
< 0.001). Alert network response time (32.4ms; 95%CI, 58.4 to 85.6;
P
< 0.001), orienting network response (5.6ms; 95%CI, 29.8 to 55.8;
P
= 0.010), and corrects number (8.0; 95%CI, 17.0 to 28.0;
P
< 0.001) also increased in the BCI group compared with the CR group. Additionally, the executive control network response time (− 105.9ms; 95%CI, − 68.3 to − 23.6;
P
= 0.002), the total average response time (− 244.8ms; 95%CI, − 155.8 to − 66.2;
P
= 0.002), and total time (− 122.0ms; 95%CI, − 80.0 to − 35.0;
P
= 0.001) were reduced in the BCI group compared with the CR group.
Conclusion
MI-BCI combined with conventional rehabilitation training could better enhance upper limb motor function and attention in stroke patients. This training method may be feasible and suitable for individuals with stroke.
Trial registration
: This study was registered in the Chinese Clinical Trial Registry with Portal Number ChiCTR2100050430(27/08/2021).
Journal Article
ENO1 Promotes OSCC Migration and Invasion by Orchestrating IL-6 Secretion from Macrophages via a Positive Feedback Loop
by
Liu, Luyao
,
Lin, Ying
,
Li, Bo
in
Carcinoma, Squamous Cell - pathology
,
Cell Line, Tumor
,
Cell Movement - physiology
2023
Oral squamous cell carcinoma (OSCC) has a five-year survival rate of less than 50% due to its susceptibility to invasion and metastasis. Crosstalk between tumor cells and macrophages has been proven to play a critical role in tumor cell migration and invasion. However, the specific mechanisms by which tumor cells interact with macrophages have not been fully elucidated. This study sought to investigate the regulatory mechanism of tumor cell-derived alpha-enolase (ENO1) in the interaction between tumor cells and macrophages during OSCC progression. Small interfering RNA (siRNA) transfection and recombinant human ENO1 (rhENO1) stimulation were used to interfere with the interaction between tumor cells and macrophages. Our results showed that ENO1 was expressed higher in CAL27 cells than in HaCaT cells and regulated lactic acid release in CAL27 cells. Conditioned medium of macrophages (Macro-CM) significantly up-regulated the ENO1 mRNA expression and protein secretion in CAL27 cells. ENO1 promoted the migration and invasion of tumor cells by facilitating the epithelial–mesenchymal transition (EMT) through macrophages. ENO1 orchestrated the IL-6 secretion of macrophages via tumor cell-derived lactic acid and the paracrine ENO1/Toll-like receptor (TLR4) signaling pathway. In turn, IL-6 promoted the migration and invasion of tumor cells. Collectively, ENO1 promotes tumor cell migration and invasion by orchestrating IL-6 secretion of macrophages via a dual mechanism, thus forming a positive feedback loop to promote OSCC progression. ENO1 might be a promising therapeutic target which is expected to control OSCC progression.
Journal Article
Research on Fault Diagnosis of Ship Diesel Generator System Based on IVY-RF
2024
Ship diesel generator systems are critical to ship navigation. However, due to the harsh marine environment, the systems are prone to failures, and traditional fault diagnosis methods are difficult to meet requirements regarding accuracy, robustness, and reliability. For this reason, this paper proposes a fault diagnosis method for a ship diesel generator system based on the IVY algorithm-optimized random forest (IVY-RF). Firstly, a model of a ship diesel generator system was constructed using MATLAB/Simulink, and the operation data under fault and normal working conditions were collected. Then, the data were preprocessed and time-domain features were extracted. Finally, the IVY-optimized random forest model was used to identify, diagnose, and classify faults. The simulation results show that the IVY-RF method could identify faulty and normal states with 100% accuracy and distinguish 12 types with 100% accuracy. Compared to seven different algorithms, the IVY-RF improved accuracy by at least 0.17% and up to 67.45% on the original dataset and by at least 1.19% and up to 49.40% in a dataset with 5% noise added. The IVY-RF-based fault diagnosis method shows excellent accuracy and robustness in complex marine environments, providing a reliable fault identification solution for ship power systems.
Journal Article
Risk spillover networks in financial system based on information theory
by
Guo, Xue
,
Li, Weibo
,
Liu, Wei
in
Business networks (Social groups)
,
Causality
,
Computer and Information Sciences
2021
Since the financial system has illustrated an increasingly prominent characteristic of inextricable connections, information theory is gradually utilized to study the financial system. By collecting the daily data of industry index (2005-2020) and region index (2012-2020) listed in China as samples, this paper applies an innovative measure named partial mutual information on mixed embedding to generate directed networks. Based on the analysis of nonlinear relationships among sectors, this paper realizes the accurate construction of “time-varying” financial network from the perspective of risk spillover. The results are presented as follow: (1) interactions can be better understood through the nonlinear networks among distinct sectors, and sectors in the networks could be classified into different types according to their topological properties connected to risk spillover; (2) in the rising stage, information is transmitted rapidly in the network, so the risk is fast diffused and absorbed; (3) in the declining stage, the network topology is more complex and panic sentiments have long term impact leading to more connections; (4) The US market, Japan market and Hongkong market have significant affect on China’s market. The results suggest that this nonlinear measure is an effective approach to develop financial networks and explore the mechanism of risk spillover.
Journal Article
Research on High-Frequency Modification Method of Industrial-Frequency Smelting Transformer Based on Parallel Connection of Multiple Windings
Under the background of “dual-carbon” strategy and global energy transition, the metallurgical industry, which accounts for 15–20% of industrial energy consumption, urgently needs to reduce the energy consumption and emission of DC power supply of electric furnaces. Aiming at the existing 400–800 V/≥3000 A industrial-frequency transformer-rectifier system with low efficiency, large volume, heat dissipation difficulties and other bottlenecks, this thesis proposes and realizes a high-frequency integrated DC power supply scheme for high-power electric furnaces: high-frequency transformer core and rectifier circuit are deeply integrated, which breaks through and reduces the volume of the system by more than 40%, and significantly reduces the iron consumption; multiple cores and three windings in parallel are used for the system. The topology of multiple cores and three windings in parallel enables several independent secondary stages to share the large current of 3000 A level uniformly, eliminating the local overheating and current imbalance; the combination of high-frequency rectification and phase-shift control strategy enhances the input power factor to more than 0.95 and cuts down the grid-side harmonics remarkably. The authors have completed the design of 100 kW prototype, magneto-electric joint simulation, thermal structure coupling analysis, control algorithm development and field comparison test, and the results show that the program compared with the traditional industrial-frequency system efficiency increased by 12–15%, the system temperature rise reduced by 20 K, electrode voltage increased by 10–15%, the input power of furnace increased by 12%, and the harmonic index meets the requirements of the traditional industrial-frequency system. The results show that the efficiency of this scheme is 12–15% higher than the traditional IF system, the temperature rise in the system is 20 K lower, the voltage at the electrode end is 10–15% higher, the input power of the furnace is increased by 12%, and the harmonic indexes meet the requirements of GB/T 14549, which verifies the value of the scheme for realizing high efficiency, miniaturization, and reliable DC power supply in metallurgy.
Journal Article
Practical Application of Complementary Regulation Strategy of Run-of-River Small Hydropower and Distributed Photovoltaic Based on Multi-Scale Copula-MPC Algorithm
2025
A novel multi-scale copula-based model predictive control (MPC) method is proposed to address the core regulation challenges of runoff hydropower and distributed photovoltaic systems within high-penetration renewable energy grids. Complex spatio-temporal complementarity under ecological constraints and the limitations of conventional methods were critically analyzed. The core innovation lies in integrating copula theory with MPC, enabling adaptive spatio-temporal optimization and weight adjustment to significantly enhance the efficiency of complementary regulation and overcome traditional performance bottlenecks. Key nonlinear dependencies of water–solar resources were investigated, and mainstream techniques (copula analysis, MPC, rolling optimization, adaptive weighting) were evaluated for their applicability. Future directions for improving modeling precision and intelligent adaptive control are outlined.
Journal Article
Common Genetic Variants Modulate Pathogen-Sensing Responses in Human Dendritic Cells
by
Imboywa, Selina H.
,
McCabe, Cristin
,
Chipendo, Portia I.
in
Adult
,
Autoimmune Diseases - genetics
,
Communicable Diseases
2014
It is difficult to determine the mechanistic consequences of context-dependent genetic variants, some of which may be related to disease (see the Perspective by
Gregersen
). Two studies now report on the effects of stimulating immunological monocytes and dendritic cells with proteins that can elicit a response to bacterial or viral infection and assess the functional links between genetic variants and profiles of gene expression.
M. N. Lee
et al.
(
10.1126/science.1246980
) analyzed the expression of more than 400 genes, in dendritic cells from 534 healthy subjects, which revealed how expression quantitative trait loci (eQTLs) affect gene expression within the interferon-β and the Toll-like receptor 3 and 4 pathways.
Fairfax
et al.
(
10.1126/science.1246949
) performed a genome-wide analysis to show that many eQTLs affected monocyte gene expression in a stimulus- or time-specific manner.
Mapping of human host-pathogen gene-by-environment interactions identifies pathogen-specific loci.
[Also see Perspective by
Gregersen
]
Little is known about how human genetic variation affects the responses to environmental stimuli in the context of complex diseases. Experimental and computational approaches were applied to determine the effects of genetic variation on the induction of pathogen-responsive genes in human dendritic cells. We identified 121 common genetic variants associated in cis with variation in expression responses to
Escherichia coli
lipopolysaccharide, influenza, or interferon-β (IFN-β). We localized and validated causal variants to binding sites of pathogen-activated STAT (signal transducer and activator of transcription) and IRF (IFN-regulatory factor) transcription factors. We also identified a common variant in
IRF7
that is associated in trans with type I IFN induction in response to influenza infection. Our results reveal common alleles that explain interindividual variation in pathogen sensing and provide functional annotation for genetic variants that alter susceptibility to inflammatory diseases.
Journal Article
Resveratrol suppresses OSCC invasion and migration by regulating macrophage polarization via Syk signaling pathway
by
Dong, Xiaodan
,
Li, Bo
,
Qi, Ying
in
Carcinoma, Squamous Cell - drug therapy
,
Carcinoma, Squamous Cell - metabolism
,
Carcinoma, Squamous Cell - pathology
2025
An increasing amount of evidence indicates that the metastasis in oral squamous cell carcinoma (OSCC) is closely associated with the polarization phenotype of tumor-associated macrophages (TAMs). Resveratrol (RES) has been demonstrated to exert an inhibitory effect on the invasion and migration of OSCC cells. However, the mechanism by which RES inhibits OSCC invasion and migration remains to be fully elucidated.
RES for reprogramming TAMs (R-RES group) and RES group were used to interfere with the polarization of tumor-associated macrophages (TAMs). RT-qPCR, ELISA, Western blotting, immunofluorescence staining, transwell and wound-healing assays were used to investigate the anti-tumor mechanism of RES.
R-RES reprogramed TAMs from M2 to M1 phenotype. RES promoted M1 polarization of TAMs and inhibited M2 polarization of TAMs. In mechanism, inhibition of Syk signaling pathway in TAMs attenuated the invasive and migratory ability of CAL27 cells through promoting M1 polarization of TAMs and inhibiting M2 polarization of TAMs.
RES suppresses OSCC invasion and migration by regulating the polarization phenotype of TAMs via Syk signaling pathway, further elucidating the anti-tumor mechanism of RES.
Journal Article
Wheat Yield Prediction Based on Unmanned Aerial Vehicles-Collected Red–Green–Blue Imagery
2021
Unmanned aerial vehicles-collected (UAVs) digital red–green–blue (RGB) images provided a cost-effective method for precision agriculture applications regarding yield prediction. This study aims to fully explore the potential of UAV-collected RGB images in yield prediction of winter wheat by comparing it to multi-source observations, including thermal, structure, volumetric metrics, and ground-observed leaf area index (LAI) and chlorophyll content under the same level or across different levels of nitrogen fertilization. Color indices are vegetation indices calculated by the vegetation reflectance at visible bands (i.e., red, green, and blue) derived from RGB images. The results showed that some of the color indices collected at the jointing, flowering, and early maturity stages had high correlation (R2 = 0.76–0.93) with wheat grain yield. They gave the highest prediction power (R2 = 0.92–0.93) under four levels of nitrogen fertilization at the flowering stage. In contrast, the other measurements including canopy temperature, volumetric metrics, and ground-observed chlorophyll content showed lower correlation (R2 = 0.52–0.85) to grain yield. In addition, thermal information as well as volumetric metrics generally had little contribution to the improvement of grain yield prediction when combining them with color indices derived from digital images. Especially, LAI had inferior performance to color indices in grain yield prediction within the same level of nitrogen fertilization at the flowering stage (R2 = 0.00–0.40 and R2 = 0.55–0.68), and color indices provided slightly better prediction of yield than LAI at the flowering stage (R2 = 0.93, RMSE = 32.18 g/m2 and R2 = 0.89, RMSE = 39.82 g/m2) under all levels of nitrogen fertilization. This study highlights the capabilities of color indices in wheat yield prediction across genotypes, which also indicates the potential of precision agriculture application using many other flexible, affordable, and easy-to-handle devices such as mobile phones and near surface digital cameras in the future.
Journal Article