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"Li, Yinghui"
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Suitability evaluation of land reclamation as arable land in coal mining area based on catastrophe theory
2023
Niumasi Coal Mine (located in Shaodong City, Hunan Province, China) was an important producing area of high-quality coking coal in Hunan Province. After large-scale mining of underground coal seams in the area, there has been a large area of surface subsidence and serious land damage. The damaged land urgently needs to be reclaimed. In this paper, the suitability of land reclamation as arable land in Niumasi coal mining area was comprehensively evaluated, and a catastrophe progression model (CPM) for the suitability evaluation of land reclamation as arable land in coal mining area was put forward with the help of the catastrophe theory. The suitability classification was divided into four grades: suitable, moderately suitable, less suitable, and unsuitable. Eleven parameters including terrain slope grade, effective thickness of soil layer, soil parent materials, soil contamination, organic content, alkali hydrolyzable nitrogen (N), available phosphorus (P), available potassium (K), ground collapse, land destruction extent, and conditions of irrigation and drainage were selected as evaluation indicators, and the classification standards of each evaluation indicator was determined. Using MATLAB software to generate a total of 1200 samples (300 samples per level) between the arrays corresponding to each level of standards according to the normal distribution principle, of which 800 samples were used as training samples to establish the catastrophe progression criteria, and 400 samples as test samples to verify the reliability of the proposed criteria. According to CPM, the suitability status of the four land samples in Shuijingtou working area of Niumasi Coal Mine were identified. The evaluation results show that the suitability level of three lands are all ‘Moderately suitable’, and one sample is ‘Unsuitable’. Mining coal has the greatest damage to paddy fields, followed by the dry farming lands and vegetable lands, and the least impact to the forest lands. CPM can not only evaluate the suitability of land reclamation, and comprehensively compare the suitability degrees, but also can assess the damage degree of coal mining to different types of lands. This paper aims to provide a new idea for the study of quantitative evaluation methods of land reclamation suitability. The results have reference and guiding significance for the comprehensive evaluation of the suitability of land reclamation as arable land in coal mining areas.
Article highlights
The catastrophe theory can be used to evaluate the suitability of land reclamation as arable land in coal mining area. A catastrophe progression model for the suitability evaluation of land reclamation as arable land in coal mining area was put forward.
Using MATLAB software to establish the catastrophe progression criteria according to the normal distribution principle.
The results have reference and guiding significance for the comprehensive evaluation of the suitability of land reclamation as arable land in coal mining areas.
Journal Article
Boosting Hydrogen Storage Performance of MgH2 by Oxygen Vacancy-Rich H-V2O5 Nanosheet as an Excited H-Pump
2024
HighlightsGraphene-like 2D V2O5 nanosheets rich in oxygen vacancies are designed as multi-functional catalysts to fabricate MgH2-H-V2O5 composites.Hydrogen release starts from 185 °C and capacity retention is as high as 99% after 100 cycles at 275 °C.The composites present rapid kinetics and impressive hydrogen absorption capability at near room temperature.The oxygen vacancies could directly enhance kinetics of MgH2 while indirectly exciting “hydrogen pump” effect of VH2/V.MgH2 is a promising high-capacity solid-state hydrogen storage material, while its application is greatly hindered by the high desorption temperature and sluggish kinetics. Herein, intertwined 2D oxygen vacancy-rich V2O5 nanosheets (H-V2O5) are specifically designed and used as catalysts to improve the hydrogen storage properties of MgH2. The as-prepared MgH2-H-V2O5 composites exhibit low desorption temperatures (Tonset = 185 °C) with a hydrogen capacity of 6.54 wt%, fast kinetics (Ea = 84.55 ± 1.37 kJ mol−1 H2 for desorption), and long cycling stability. Impressively, hydrogen absorption can be achieved at a temperature as low as 30 °C with a capacity of 2.38 wt% within 60 min. Moreover, the composites maintain a capacity retention rate of ~ 99% after 100 cycles at 275 °C. Experimental studies and theoretical calculations demonstrate that the in-situ formed VH2/V catalysts, unique 2D structure of H-V2O5 nanosheets, and abundant oxygen vacancies positively contribute to the improved hydrogen sorption properties. Notably, the existence of oxygen vacancies plays a double role, which could not only directly accelerate the hydrogen ab/de-sorption rate of MgH2, but also indirectly affect the activity of the catalytic phase VH2/V, thereby further boosting the hydrogen storage performance of MgH2. This work highlights an oxygen vacancy excited “hydrogen pump” effect of VH2/V on the hydrogen sorption of Mg/MgH2. The strategy developed here may pave a new way toward the development of oxygen vacancy-rich transition metal oxides catalyzed hydride systems.
Journal Article
Transcriptional Regulation during Aberrant Activation of NF-κB Signalling in Cancer
2023
The NF-κB signalling pathway is a major signalling cascade involved in the regulation of inflammation and innate immunity. It is also increasingly recognised as a crucial player in many steps of cancer initiation and progression. The five members of the NF-κB family of transcription factors are activated through two major signalling pathways, the canonical and non-canonical pathways. The canonical NF-κB pathway is prevalently activated in various human malignancies as well as inflammation-related disease conditions. Meanwhile, the significance of non-canonical NF-κB pathway in disease pathogenesis is also increasingly recognized in recent studies. In this review, we discuss the double-edged role of the NF-κB pathway in inflammation and cancer, which depends on the severity and extent of the inflammatory response. We also discuss the intrinsic factors, including selected driver mutations, and extrinsic factors, such as tumour microenvironment and epigenetic modifiers, driving aberrant activation of NF-κB in multiple cancer types. We further provide insights into the importance of the interaction of NF-κB pathway components with various macromolecules to its role in transcriptional regulation in cancer. Finally, we provide a perspective on the potential role of aberrant NF-κB activation in altering the chromatin landscape to support oncogenic development.
Journal Article
A real-world disproportionality analysis of Tenofovir Alafenamide (TAF): Data mining of the FDA adverse event reporting system (FAERS)
by
Wen, Jiaqi
,
Li, Yinghui
,
Zhang, Chao
in
Adenine - adverse effects
,
Adenine - analogs & derivatives
,
Adenine - therapeutic use
2025
Tenofovir Alafenamide (TAF) is a novel antiviral drug approved for the treatment of hepatitis B virus (HBV) infection. Our research objective was to evaluate the safety characteristics of TAF in practical settings by analyzing data from the FDA adverse event reporting system (FAERS) database maintained by the Food and Drug Administration (FDA).
In our investigation, we examined the uneven distribution of adverse events associated with TAF by employing statistical metrics including the Reporting Odds Ratio (ROR), Proportional Reporting Ratio (PRR), Bayesian Confidence Propagation Neural Network (BCPNN), and Gamma-Poisson Shrinker (GPS) to determine their significance.
Out of the 57692002 case reports in the FAERS database, 1911 reported TAF as a major suspected (PS) adverse events (AEs). A disproportionate analysis identified 43 preferred terms (PTs) related to TAF. It is worth noting that we have observed unexpected significant adverse events, such as cerebral infarction, bone pain, swallowing difficulties, drug resistance, dementia, etc., which are not mentioned in the drug instructions.
These findings unearth novel neurological, metabolic, and resistance - related risks, thereby necessitating a marked increase in clinical vigilance. The identification of signals related to cerebral infarction and dementia implies potential vascular/metabolic interplay, highlighting the importance of lipid monitoring among long - term tenofovir alafenamide (TAF) users. In response, healthcare providers should prioritize strengthening the monitoring of neurological symptoms and lipid profiles, reevaluating bone health assessment and management protocols especially in high - risk populations, and providing support to enhance patient adherence to mitigate resistance risks. This analysis offers crucial post - marketing evidence, which is instrumental in optimizing the risk - benefit balance of TAF in the long - term management of chronic hepatitis B virus (HBV) infection.
Journal Article
Nanostructuring of Mg-Based Hydrogen Storage Materials: Recent Advances for Promoting Key Applications
2023
HighlightsA comprehensive discussion of the recent advances in the nanostructure engineering of Mg-based hydrogen storage materials is presented.The fundamental theories of hydrogen storage in nanostructured Mg-based hydrogen storage materials and their practical applications are reviewed.The challenges and recommendations of current nanostructured hydrogen storage materials are pointed out.With the depletion of fossil fuels and global warming, there is an urgent demand to seek green, low-cost, and high-efficiency energy resources. Hydrogen has been considered as a potential candidate to replace fossil fuels, due to its high gravimetric energy density (142 MJ kg−1), high abundance (H2O), and environmental-friendliness. However, due to its low volume density, effective and safe hydrogen storage techniques are now becoming the bottleneck for the \"hydrogen economy\". Under such a circumstance, Mg-based hydrogen storage materials garnered tremendous interests due to their high hydrogen storage capacity (~ 7.6 wt% for MgH2), low cost, and excellent reversibility. However, the high thermodynamic stability (ΔH = − 74.7 kJ mol−1 H2) and sluggish kinetics result in a relatively high desorption temperature (> 300 °C), which severely restricts widespread applications of MgH2. Nano-structuring has been proven to be an effective strategy that can simultaneously enhance the ab/de-sorption thermodynamic and kinetic properties of MgH2, possibly meeting the demand for rapid hydrogen desorption, economic viability, and effective thermal management in practical applications. Herein, the fundamental theories, recent advances, and practical applications of the nanostructured Mg-based hydrogen storage materials are discussed. The synthetic strategies are classified into four categories: free-standing nano-sized Mg/MgH2 through electrochemical/vapor-transport/ultrasonic methods, nanostructured Mg-based composites via mechanical milling methods, construction of core-shell nano-structured Mg-based composites by chemical reduction approaches, and multi-dimensional nano-sized Mg-based heterostructure by nanoconfinement strategy. Through applying these strategies, near room temperature ab/de-sorption (< 100 °C) with considerable high capacity (> 6 wt%) has been achieved in nano Mg/MgH2 systems. Some perspectives on the future research and development of nanostructured hydrogen storage materials are also provided.
Journal Article
Oxygen Vacancy-Rich 2D TiO2 Nanosheets: A Bridge Toward High Stability and Rapid Hydrogen Storage Kinetics of Nano-Confined MgH2
2022
HighlightsA MgH2/TiO2 heterostructure with nano MgH2 assembled on oxygen vacancy-rich 2D TiO2 nanosheets was successfully fabricated via a simple solvothermal strategy.The MgH2/TiO2 heterostructure shows rapid desorption kinetics, low dehydrogenation temperature, and excellent cycling stability.In situ HRTEM observations and ex situ XPS analyses reveal that multi-valance of Ti species, presence of abundant oxygen vacancies, formation of catalytic Mg-Ti oxides, and confinement of TiO2 nanosheets, contribute to the high stability and kinetically accelerated hydrogen sorption performances of Mg.MgH2 has attracted intensive interests as one of the most promising hydrogen storage materials. Nevertheless, the high desorption temperature, sluggish kinetics, and rapid capacity decay hamper its commercial application. Herein, 2D TiO2 nanosheets with abundant oxygen vacancies are used to fabricate a flower-like MgH2/TiO2 heterostructure with enhanced hydrogen storage performances. Particularly, the onset hydrogen desorption temperature of the MgH2/TiO2 heterostructure is lowered down to 180 °C (295 °C for blank MgH2). The initial desorption rate of MgH2/TiO2 reaches 2.116 wt% min−1 at 300 °C, 35 times of the blank MgH2 under the same conditions. Moreover, the capacity retention is as high as 98.5% after 100 cycles at 300 °C, remarkably higher than those of the previously reported MgH2-TiO2 composites. Both in situ HRTEM observations and ex situ XPS analyses confirm that the synergistic effects from multi-valance of Ti species, accelerated electron transportation caused by oxygen vacancies, formation of catalytic Mg-Ti oxides, and stabilized MgH2 NPs confined by TiO2 nanosheets contribute to the high stability and kinetically accelerated hydrogen storage performances of the composite. The strategy of using 2D substrates with abundant defects to support nano-sized energy storage materials to build heterostructure is therefore promising for the design of high-performance energy materials.
Journal Article
Regulated cell death: discovery, features and implications for neurodegenerative diseases
2021
Regulated cell death (RCD) is a ubiquitous process in living organisms that is essential for tissue homeostasis or to restore biological balance under stress. Over the decades, various forms of RCD have been reported and are increasingly being found to involve in human pathologies and clinical outcomes. We focus on five high-profile forms of RCD, including apoptosis, pyroptosis, autophagy-dependent cell death, necroptosis and ferroptosis. Cumulative evidence supports that not only they have different features and various pathways, but also there are extensive cross-talks between modes of cell death. As the understanding of RCD pathway in evolution, development, physiology and disease continues to improve. Here we review an updated classification of RCD on the discovery and features of processes. The prominent focus will be placed on key mechanisms of RCD and its critical role in neurodegenerative disease.
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Journal Article
Relationships of coping styles and psychological distress among patients with insomnia disorder
2021
Background
Insomnia appears to be one of the most frequent sleep complaints in the general population. It has significant negative impact on daily functioning. However, there has been little research that described the effect of coping style in insomnia disorder.
Methods
The Simplified Coping Style Questionnaire (SCSQ) was used to evaluate 79 adult patients with insomnia disorder alongside 80 healthy controls. Additionally, sleep quality was assessed with the Pittsburgh Sleep Quality Index (PSQI), and Symptom Checklist-90-Revised (SCL-90R) was utilized to determine the status of depression, anxiety and other psychological symptoms.
Results
Positive coping style score was significantly lower, whereas negative coping style score and nine symptomatic dimensions of SCL-90R were significantly higher in insomnia patients than in controls. Positive coping style score was adversely related to PSQI score, obsessive-compulsive, depression, anxiety and phobic anxiety, whereas negative coping style score was positively related to PSQI score, somatization and interpersonal sensitivity. Further multiple stepwise regression analysis showed that PSQI total score was independently and positively correlated with negative coping style score.
Conclusions
Insomniacs use more negative coping styles and less positive ones. Positive coping is adversely associated with insomnia symptoms and psychological distress, whereas negative coping is positively related to those symptoms. And negative coping has a negative effect on sleep quality. we should attach importance to coping styles of insomniacs in clinical practice, which may help to develop more targeted prevention and intervention strategies.
Journal Article
Systematic benchmarking of deep-learning methods for tertiary RNA structure prediction
by
Bahai, Akash
,
Li, Yinghui
,
Mu, Yuguang
in
Benchmarking - methods
,
Benchmarks
,
Computational Biology - methods
2024
The 3D structure of RNA critically influences its functionality, and understanding this structure is vital for deciphering RNA biology. Experimental methods for determining RNA structures are labour-intensive, expensive, and time-consuming. Computational approaches have emerged as valuable tools, leveraging physics-based-principles and machine learning to predict RNA structures rapidly. Despite advancements, the accuracy of computational methods remains modest, especially when compared to protein structure prediction. Deep learning methods, while successful in protein structure prediction, have shown some promise for RNA structure prediction as well, but face unique challenges. This study systematically benchmarks state-of-the-art deep learning methods for RNA structure prediction across diverse datasets. Our aim is to identify factors influencing performance variation, such as RNA family diversity, sequence length, RNA type, multiple sequence alignment (MSA) quality, and deep learning model architecture. We show that generally ML-based methods perform much better than non-ML methods on most RNA targets, although the performance difference isn’t substantial when working with unseen novel or synthetic RNAs. The quality of the MSA and secondary structure prediction both play an important role and most methods aren’t able to predict non-Watson-Crick pairs in the RNAs. Overall among the automated 3D RNA structure prediction methods, DeepFoldRNA has the best prediction results followed by DRFold as the second best method. Finally, we also suggest possible mitigations to improve the quality of the prediction for future method development.
Journal Article
The role of leucine and its metabolites in protein and energy metabolism
by
Li, Yinghui
,
Anthony, Tracy G.
,
Kong, Xiangfeng
in
adipose tissue
,
Amino acids
,
Analytical Chemistry
2016
Leucine (Leu) is a nutritionally essential branched-chain amino acid (BCAA) in animal nutrition. It is usually one of the most abundant amino acids in high-quality protein foods. Leu increases protein synthesis through activation of the mammalian target of rapamycin (mTOR) signaling pathway in skeletal muscle, adipose tissue and placental cells. Leu promotes energy metabolism (glucose uptake, mitochondrial biogenesis, and fatty acid oxidation) to provide energy for protein synthesis, while inhibiting protein degradation. Approximately 80 % of Leu is normally used for protein synthesis, while the remainder is converted to α-ketoisocaproate (α-KIC) and β-hydroxy-β-methylbutyrate (HMB) in skeletal muscle. Therefore, it has been hypothesized that some of the functions of Leu are modulated by its metabolites. Both α-KIC and HMB have recently received considerable attention as nutritional supplements used to increase protein synthesis, inhibit protein degradation, and regulate energy homeostasis in a variety of in vitro and in vivo models. Leu and its metabolites hold great promise to enhance the growth and health of animals (including humans, birds and fish).
Journal Article