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result(s) for
"Liu, Quanying"
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An instantly fixable and self-adaptive scaffold for skull regeneration by autologous stem cell recruitment and angiogenesis
2022
Limited stem cells, poor stretchability and mismatched interface fusion have plagued the reconstruction of cranial defects by cell-free scaffolds. Here, we designed an instantly fixable and self-adaptive scaffold by dopamine-modified hyaluronic acid chelating Ca
2+
of the microhydroxyapatite surface and bonding type I collagen to highly simulate the natural bony matrix. It presents a good mechanical match and interface integration by appropriate calcium chelation, and responds to external stress by flexible deformation. Meanwhile, the appropriate matrix microenvironment regulates macrophage M2 polarization and recruits endogenous stem cells. This scaffold promotes the proliferation and osteogenic differentiation of BMSCs in vitro, as well as significant ectopic mineralization and angiogenesis. Transcriptome analysis confirmed the upregulation of relevant genes and signalling pathways was associated with M2 macrophage activation, endogenous stem cell recruitment, angiogenesis and osteogenesis. Together, the scaffold realized 97 and 72% bone cover areas after 12 weeks in cranial defect models of rabbit (Φ = 9 mm) and beagle dog (Φ = 15 mm), respectively.
Limited stem cells and mismatched interface fusion have plagued biomaterial-mediated cranial reconstruction. Here, the authors engineer an instantly fixable and self-adaptive scaffold to promote calcium chelation and interface integration, regulate macrophage M2 polarization, and recruit endogenous stem cells.
Journal Article
Multi-objective optimization via evolutionary algorithm (MOVEA) for high-definition transcranial electrical stimulation of the human brain
2023
Designing a transcranial electrical stimulation (tES) strategy requires considering multiple objectives, such as intensity in the target area, focality, stimulation depth, and avoidance zone. These objectives are often mutually exclusive. In this paper, we propose a general framework, called multi-objective optimization via evolutionary algorithm (MOVEA), which solves the non-convex optimization problem in designing tES strategies without a predefined direction. MOVEA enables simultaneous optimization of multiple targets through Pareto optimization, generating a Pareto front after a single run without manual weight adjustment and allowing easy expansion to more targets. This Pareto front consists of optimal solutions that meet various requirements while respecting trade-off relationships between conflicting objectives such as intensity and focality. MOVEA is versatile and suitable for both transcranial alternating current stimulation (tACS) and transcranial temporal interference stimulation (tTIS) based on high definition (HD) and two-pair systems. We comprehensively compared tACS and tTIS in terms of intensity, focality, and steerability for targets at different depths. Our findings reveal that tTIS enhances focality by reducing activated volume outside the target by 60%. HD-tTIS and HD-tDCS can achieve equivalent maximum intensities, surpassing those of two-pair tTIS, such as 0.51 V/m under HD-tACS/HD-tTIS and 0.42 V/m under two-pair tTIS for the motor area as a target. Analysis of variance in eight subjects highlights individual differences in both optimal stimulation policies and outcomes for tACS and tTIS, emphasizing the need for personalized stimulation protocols. These findings provide guidance for designing appropriate stimulation strategies for tACS and tTIS. MOVEA facilitates the optimization of tES based on specific objectives and constraints, advancing tTIS and tACS-based neuromodulation in understanding the causal relationship between brain regions and cognitive functions and treating diseases. The code for MOVEA is available at https://github.com/ncclabsustech/MOVEA.
•MOVEA effectively optimizes trade-offs among conflicting tES objectives.•MOVEA can optimize electric field maximization without a predefined orientation.•HD-tTIS achieves equivalent maximum intensity to HD-tACS with better focality.•MOVEA elucidates the impact of inter-subject variability on tACS and tTIS outcomes.
Journal Article
The neural correlates of novelty and variability in human decision-making under an active inference framework
2025
Active inference integrates perception, decision-making, and learning into a united theoretical framework, providing an efficient way to trade off exploration and exploitation by minimizing (expected) free energy. In this study, we asked how the brain represents values and uncertainties (novelty and variability), and resolves these uncertainties under the active inference framework in the exploration-exploitation trade-off. Twenty-five participants performed a contextual two-armed bandit task, with electroencephalogram (EEG) recordings. By comparing the model evidence for active inference and reinforcement learning models of choice behavior, we show that active inference better explains human decision-making under novelty and variability, which entails exploration or information seeking. The EEG sensor-level results show that the activity in the frontal, central, and parietal regions is associated with novelty, while the activity in the frontal and central brain regions is associated with variability. The EEG source-level results indicate that the expected free energy is encoded in the frontal pole and middle frontal gyrus and uncertainties are encoded in different brain regions but with overlap. Our study dissociates the expected free energy and uncertainties in active inference theory and their neural correlates, speaking to the construct validity of active inference in characterizing cognitive processes of human decisions. It provides behavioral and neural evidence of active inference in decision processes and insights into the neural mechanism of human decisions under uncertainties.
Journal Article
Detecting Large-Scale Brain Networks Using EEG: Impact of Electrode Density, Head Modeling and Source Localization
2018
Resting state networks (RSNs) in the human brain were recently detected using high-density electroencephalography (hdEEG). This was done by using an advanced analysis workflow to estimate neural signals in the cortex and to assess functional connectivity (FC) between distant cortical regions. FC analyses were conducted either using temporal (tICA) or spatial independent component analysis (sICA). Notably, EEG-RSNs obtained with sICA were very similar to RSNs retrieved with sICA from functional magnetic resonance imaging data. It still remains to be clarified, however, what technological aspects of hdEEG acquisition and analysis primarily influence this correspondence. Here we examined to what extent the detection of EEG-RSN maps by sICA depends on the electrode density, the accuracy of the head model, and the source localization algorithm employed. Our analyses revealed that the collection of EEG data using a high-density montage is crucial for RSN detection by sICA, but also the use of appropriate methods for head modeling and source localization have a substantial effect on RSN reconstruction. Overall, our results confirm the potential of hdEEG for mapping the functional architecture of the human brain, and highlight at the same time the interplay between acquisition technology and innovative solutions in data analysis.
Journal Article
Diversity-enabled sweet spots in layered architectures and speed–accuracy trade-offs in sensorimotor control
2021
Nervous systems sense, communicate, compute, and actuate movement using distributed components with severe trade-offs in speed, accuracy, sparsity, noise, and saturation. Nevertheless, brains achieve remarkably fast, accurate, and robust control performance due to a highly effective layered control architecture. Here, we introduce a driving task to study how a mountain biker mitigates the immediate disturbance of trail bumps and responds to changes in trail direction. We manipulated the time delays and accuracy of the control input from the wheel as a surrogate for manipulating the characteristics of neurons in the control loop. The observed speed–accuracy trade-offs motivated a theoretical framework consisting of two layers of control loops—a fast, but inaccurate, reflexive layer that corrects for bumps and a slow, but accurate, planning layer that computes the trajectory to follow—each with components having diverse speeds and accuracies within each physical level, such as nerve bundles containing axons with a wide range of sizes. Our model explains why the errors from two control loops are additive and shows how the errors in each control loop can be decomposed into the errors caused by the limited speeds and accuracies of the components. These results demonstrate that an appropriate diversity in the properties of neurons across layers helps to create “diversity-enabled sweet spots,” so that both fast and accurate control is achieved using slow or inaccurate components.
Journal Article
Anti-drift pose tracker (ADPT), a transformer-based network for robust animal pose estimation cross-species
by
Wei, Pengfei
,
Sun, Xing
,
Han, Ming-Hu
in
Animal behavior
,
animal behavior analysis
,
animal pose estimation
2025
Deep learning-based methods have advanced animal pose estimation, enhancing accuracy, and efficiency in quantifying animal behavior. However, these methods frequently experience tracking drift, where noise-induced jumps in body point estimates compromise reliability. Here, we present the anti-drift pose tracker (ADPT), a transformer-based tool that mitigates tracking drift in behavioral analysis. Extensive experiments across cross-species datasets—including proprietary mouse and monkey recordings and public Drosophila and macaque datasets—demonstrate that ADPT significantly reduces drift and surpasses existing models like DeepLabCut and SLEAP in accuracy. Moreover, ADPT achieved 93.16% identification accuracy for 10 unmarked mice and 90.36% accuracy for freely interacting unmarked mice, which can be further refined to 99.72%, enhancing both anti-drift performance and pose estimation accuracy in social interactions. With its end-to-end design, ADPT is computationally efficient and suitable for real-time analysis, offering a robust solution for reproducible animal behavior studies. The ADPT code is available at https://github.com/tangguoling/ADPT .
Journal Article
Contrastive learning of shared spatiotemporal EEG representations across individuals for naturalistic neuroscience
2024
•Contrastive learning was employed to align EEG patterns across subjects.•Higher intersubject correlation was obtained than state-of-the-art methods.•The model extracts latent patterns that reflect stimulus-relevant properties.
Neural representations induced by naturalistic stimuli offer insights into how humans respond to stimuli in daily life. Understanding neural mechanisms underlying naturalistic stimuli processing hinges on the precise identification and extraction of the shared neural patterns that are consistently present across individuals. Targeting the Electroencephalogram (EEG) technique, known for its rich spatial and temporal information, this study presents a framework for Contrastive Learning of Shared SpatioTemporal EEG Representations across individuals (CL-SSTER). CL-SSTER utilizes contrastive learning to maximize the similarity of EEG representations across individuals for identical stimuli, contrasting with those for varied stimuli. The network employs spatial and temporal convolutions to simultaneously learn the spatial and temporal patterns inherent in EEG. The versatility of CL-SSTER was demonstrated on three EEG datasets, including a synthetic dataset, a natural speech comprehension EEG dataset, and an emotional video watching EEG dataset. CL-SSTER attained the highest inter-subject correlation (ISC) values compared to the state-of-the-art ISC methods. The latent representations generated by CL-SSTER exhibited reliable spatiotemporal EEG patterns, which can be explained by properties of the naturalistic stimuli. CL-SSTER serves as an interpretable and scalable framework for the identification of inter-subject shared neural representations in naturalistic neuroscience.
Journal Article
Stimulation of an entorhinal-hippocampal extinction circuit facilitates fear extinction in a post-traumatic stress disorder model
by
Zhao, Xin-Yu
,
Zhu, Michael X.
,
Wu, Xin-Rong
in
Analysis
,
Animals
,
CA1 Region, Hippocampal - metabolism
2024
Effective psychotherapy of post-traumatic stress disorder (PTSD) remains challenging owing to the fragile nature of fear extinction, for which the ventral hippocampal CA1 (vCA1) region is considered as a central hub. However, neither the core pathway nor the cellular mechanisms involved in implementing extinction are known. Here, we unveil a direct pathway, where layer 2a fan cells in the lateral entorhinal cortex (LEC) target parvalbumin-expressing interneurons (PV-INs) in the vCA1 region to propel low-gamma-band synchronization of the LEC-vCA1 activity during extinction learning. Bidirectional manipulations of either hippocampal PV-INs or LEC fan cells sufficed for fear extinction. Gamma entrainment of vCA1 by deep brain stimulation (DBS) or noninvasive transcranial alternating current stimulation (tACS) of LEC persistently enhanced the PV-IN activity in vCA1, thereby promoting fear extinction. These results demonstrate that the LEC-vCA1 pathway forms a top-down motif to empower low-gamma-band oscillations that facilitate fear extinction. Finally, application of low-gamma DBS and tACS to a mouse model with persistent PTSD showed potent efficacy, suggesting that the dedicated LEC-vCA1 pathway can be stimulated for therapy to remove traumatic memory trace.
Journal Article
An intracranial dissection of human escape circuits
2025
Predators attack across diverse spatiotemporal scales, prompting prey to respond through simple motor reactions (e.g., fleeing) or more complex cognitive processes (e.g., strategic planning). Recent studies suggest that escape relies on two distinct circuits: the reactive and cognitive fear circuits. However, their specific roles in different stages of escaping remain unclear. In this study, we recorded SEEG from epilepsy patients while they performed a modified flight initiation distance task. We identified cognitive fear regions, including the vmPFC and hippocampus, that encoded threat levels during the information processing stage. In the actual escaping stage, especially under rapid attack, the reactive fear circuit, including the midcingulate cortex and amygdala, was prominently activated. Notably, under rapid attack, we observed significant theta-band information flow from the amygdala to the vmPFC, suggesting dynamic communication between the reactive and cognitive fear circuits. These findings illuminate the distinct and complementary roles of the reactive and cognitive fear circuits in facilitating successful human escape.
The authors use human SEEG recordings during a virtual escape task to identify roles for cognitive and reactive fear circuits in threat evaluation and escape decisions, respectively. They further uncover Theta-band flow from the amygdala to the vmPFC during rapid attacks.
Journal Article
Resting-state functional connectivity of social brain regions predicts motivated dishonesty
2022
Motivated dishonesty is a typical social behavior varying from person to person. Resting-state fMRI (rsfMRI) is capable of identifying unique patterns from functional connectivity (FC) between brain regions. Recent work has built a link between brain networks in resting state to dishonesty in Western participants. To determine and reproduce the relevant neural patterns and build an interpretable model to predict dishonesty, we analyzed two conceptually similar datasets containing rsfMRI data with different dishonesty tasks. Both tasks implemented the information-passing paradigm, in which monetary rewards were employed to induce dishonesty. We applied connectome-based predictive modeling (CPM) to build a model among FC within and between four social brain networks (reward, self-referential, moral, and cognitive control). The CPM analysis indicated that FCs of social brain networks are predictive of dishonesty rate, especially FCs within reward network, and between self-referential and cognitive control networks. Our study offers an conceptual replication with integrated model to predict dishonesty with rsfMRI, and the results suggest that frequent motivated dishonest decisions may require the higher engagement of social brain regions.
Journal Article