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2,782 result(s) for "Liu, Xiaomin"
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Effects of Chilling on the Structure, Function and Development of Chloroplasts
Chloroplasts are the organelles that perform energy transformation in plants. The normal physiological functions of chloroplasts are essential for plant growth and development. Chilling is a common environmental stress in nature that can directly affect the physiological functions of chloroplasts. First, chilling can change the lipid membrane state and enzyme activities in chloroplasts. Then, the efficiency of photosynthesis declines, and excess reactive oxygen species (ROS) are produced. On one hand, excess ROS can damage the chloroplast lipid membrane; on the other hand, ROS also represent a stress signal that can alter gene expression in both the chloroplast and nucleus to help regenerate damaged proteins, regulate lipid homeostasis, and promote plant adaptation to low temperatures. Furthermore, plants assume abnormal morphology, including chlorosis and growth retardation, with some even exhibiting severe necrosis under chilling stress. Here, we review the response of chloroplasts to low temperatures and focus on photosynthesis, redox regulation, lipid homeostasis, and chloroplast development to elucidate the processes involved in plant responses and adaptation to chilling stress.
Small Size, Big Impact: Recent Progress in Bottom‐Up Synthesized Nanographenes for Optoelectronic and Energy Applications
Bottom‐up synthesized graphene nanostructures, including 0D graphene quantum dots and 1D graphene nanoribbons, have recently emerged as promising candidates for efficient, green optoelectronic, and energy storage applications. The versatility in their molecular structures offers a large and novel library of nanographenes with excellent and adjustable optical, electronic, and catalytic properties. In this minireview, recent progress on the fundamental understanding of the properties of different graphene nanostructures, and their state‐of‐the‐art applications in optoelectronics and energy storage are summarized. The properties of pristine nanographenes, including high emissivity and intriguing blinking effect in graphene quantum dots, superior charge transport properties in graphene nanoribbons, and edge‐specific electrochemistry in various graphene nanostructures, are highlighted. Furthermore, it is shown that emerging nanographene‐2D material‐based van der Waals heterostructures provide an exciting opportunity for efficient green optoelectronics with tunable characteristics. Finally, challenges and opportunities of the field are highlighted by offering guidelines for future combined efforts in the synthesis, assembly, spectroscopic, and electrical studies as well as (nano)fabrication to boost the progress toward advanced device applications. The recent progress on the fundamental properties of different bottom‐up synthesized nanographenes, and the collective properties upon forming nanographene‐2D material‐based van der Waals heterostructures, toward their state‐of‐the‐art applications in optoelectronics and energy storage is summarized. Forthcoming challenges and opportunities of this emerging field are highlighted, and perspectives in boosting the progress toward advanced device applications are offered.
FPattNet: A Multi-Scale Feature Fusion Network with Occlusion Awareness for Depth Estimation of Light Field Images
A light field camera can capture light information from various directions within a scene, allowing for the reconstruction of the scene. The light field image inherently contains the depth information of the scene, and depth estimations of light field images have become a popular research topic. This paper proposes a depth estimation network of light field images with occlusion awareness. Since light field images contain many views from different viewpoints, identifying the combinations that contribute the most to the depth estimation of the center view is critical to improving the depth estimation accuracy. Current methods typically rely on a fixed set of views, such as vertical, horizontal, and diagonal, which may not be optimal for all scenes. To address this limitation, we propose a novel approach that considers all available views during depth estimation while leveraging an attention mechanism to assign weights to each view dynamically. By inputting all views into the network and employing the attention mechanism, we enable the model to adaptively determine the most informative views for each scene, thus achieving more accurate depth estimation. Furthermore, we introduce a multi-scale feature fusion strategy that amalgamates contextual information and expands the receptive field to enhance the network’s performance in handling challenging scenarios, such as textureless and occluded regions.
Worm‐Inspired Soft Robots Enable Adaptable Pipeline and Tunnel Inspection
The inspection, maintenance, and repair of pipeline and tunnel infrastructure have motivated the increasing research in the development of suitable robots with high flexibility, good adaptability, and large load capacity. Herein, a worm‐inspired soft robot that is capable of operating and performing a variety of tasks in a complicated pipeline/tunnel environment is reported. The soft tubular robot consists of elongation pneumatic actuators (EPAs), radial expansion pneumatic actuators (REPAs), and a spatial bending pneumatic actuator (SBPA). A series of experiments are performed to demonstrate the capability of the soft robot to crawl robustly under different pipeline conditions, including varying diameter, different cross‐sectional shapes, and wet or oil‐covered internal surfaces, and underwater environment. The soft robot can carry a load of more than 11 times of its own weight in a vertical pipeline. Equipped with a visualization unit, the soft robot can detect the internal conditions of the pipeline and cross the multibranched pipeline as needed. The tubular soft robot provides a useful tool for the inspection, cleaning, and maintenance of pipelines and tunnels. A worm‐inspired soft pipe robot is developed based on soft pneumatic actuators which exhibits outstanding comprehensive performances of simplified structure, high flexibility, good adaptability, and large load capacity. It can be used for pipeline inspection without damaging the tube and can perform a variety of tasks in a complicated pipe environment.
An analysis of the development of Chinese STM journals in the past 30 years
China publishes 5,052 academic journals in science, technology, and medicine. It ranks third in terms of the number of publications, behind the United States and the United Kingdom. In recent years, English-language journals have increased annually in China, but there are only just over 300 English journals published, accounting for about 6.5% of all published journals, whereas Chinese journals account for about 93.5%. Using 30 years’ data from the Chinese science citation database (CSCD), I compiled statistics on the average number of papers, the average number of references, the language of references, the distribution of author age, etc. I also analyzed the role of Chinese STM journals in terms of their academic significance. It is observed that the average number of journal papers and references per paper has been on the rise in the past 30 years. English literature accounts for a large proportion of the references, and the authors are young. The conclusion is that Chinese journals are important for young scholars to publish their papers, and Chinese scholars widely use international research results for reference in their research.
Zim4rv: an R package to modeling zero-inflated count phenotype on regional-based rare variants
Background With the advance of next-generation sequencing, various gene-based rare variant association tests have been developed, particularly for binary and continuous phenotypes. In contrast, fewer methods are available for traits not following binomial or normal distributions. To address this, we previously proposed a set of burden- and kernel-based rare variant tests for count data following zero-inflated Poisson (ZIP) distributions, referred to as ZIP-b and ZIP-k tests. We sought to extend the methods to accommodate negative binomial distribution and implemented these tests in a new R package. Results We introduce ZIM4rv , an R package designed to analyze the association of rare variants with zero-inflated counts outcomes. Our package offers two novel models developed by our team: our previously proposed ZIP-b and ZIP-k tests, and the newly derived Negative Binomial Burden and Kernel Test (ZINB-b, ZINB-k). Additionally, we include an ad-hoc two-stage analysis, testing zero and non-zero as a binary outcome and non-zero as a continuous outcome, respectively. To showcase the utility of our platform, we applied this program to analyze neuritic plaque count data from the ROSMAP cohort. Conclusion The R package ZIM4rv presents an integrated workflow for conducting association tests on a set of rare variants with zero-inflated counts data.
Cytoplasmic Endonuclease G promotes nonalcoholic fatty liver disease via mTORC2-AKT-ACLY and endoplasmic reticulum stress
Endonuclease G (ENDOG), a nuclear-encoded mitochondrial intermembrane space protein, is well known to be translocated into the nucleus during apoptosis. Recent studies have shown that ENDOG might enter the mitochondrial matrix to regulate mitochondrial genome cleavage and replication. However, little is known about the role of ENDOG in the cytosol. Our previous work showed that cytoplasmic ENDOG competitively binds with 14-3-3γ, which released TSC2 to repress mTORC1 signaling and induce autophagy. Here, we demonstrate that cytoplasmic ENDOG could also release Rictor from 14-3-3γ to activate the mTORC2-AKT-ACLY axis, resulting in acetyl-CoA production. Importantly, we observe that ENDOG could translocate to the ER, bind with Bip, and release IRE1a/PERK to activate the endoplasmic reticulum stress response, promoting lipid synthesis. Taken together, we demonstrate that loss of ENDOG suppresses acetyl-CoA production and lipid synthesis, along with reducing endoplasmic reticulum stress, which eventually alleviates high-fat diet-induced nonalcoholic fatty liver disease in female mice. Endonuclease G is known to translocate to the nucleus during apoptosis, but less is known about its role in the cytosol. Here, the authors show that cytoplasmic endonuclease G activates mTORC2 signaling and ER stress to promote NAFLD in female mice.
A DNA2 Homolog Is Required for DNA Damage Repair, Cell Cycle Regulation, and Meristem Maintenance in Plants
Plant meristem cells divide and differentiate in a spatially and temporally regulated manner, ultimately giving rise to organs. In this study, we isolated the Arabidopsis jing he sheng 1 (jhs1) mutant, which exhibited retarded growth, an abnormal pattern of meristem cell division and differentiation, and morphological defects such as fasciation, an irregular arrangement of siliques, and short roots. We identified JHS1 as a homolog of human and yeast DNA Replication Helicase/Nuclease2, which is known to be involved in DNA replication and damage repair. JHS1 is strongly expressed in the meristem of Arabidopsis. The jhs1 mutant was sensitive to DNA damage stress and had an increased DNA damage response, including increased expression of genes involved in DNA damage repair and cell cycle regulation, and a higher frequency of homologous recombination. In the meristem of the mutant plants, cell cycle progression was delayed at the G2 or late S phase and genes essential for meristem maintenance were misregulated. These results suggest that JHS1 plays an important role in DNA replication and damage repair, meristem maintenance, and development in plants.
Garlic-Derived Allicin Attenuates Parkinson’s Disease via PKA/p-CREB/BDNF/DAT Pathway Activation and Apoptotic Inhibition
Allicin (ALC), a naturally occurring organosulfur compound derived from garlic (Allium sativum), exhibits potential neuroprotective properties. Parkinson’s disease (PD) is a progressive neurodegenerative disease characterized by degeneration of dopaminergic neurons and motor dysfunction. This study utilized bioinformatics and network pharmacology methods to predict the anti-PD mechanism of ALC and established in vivo and in vitro PD models using 6-hydroxydopamine (6-OHDA) for experimental verification. Network pharmacological analysis indicates that apoptosis regulation and the PKA/p-CREB/BDNF signaling pathway are closely related to the anti-PD effect of ALC, and protein kinase A (PKA) and dopamine transporter (DAT) are key molecular targets. The experimental results show that ALC administration can alleviate the cytotoxicity of SH-SY5Y induced by 6-OHDA and simultaneously improve the motor dysfunction and dopaminergic neuron loss in PD mice. In addition, ALC can also activate the PKA/p-CREB/BDNF signaling pathway and increase the DAT level in brain tissue, regulate the expression of BAX and Bcl-2, and reduce neuronal apoptosis. These results indicate that ALC can exert anti-PD effects by up-regulating the PKA/p-CREB/BDNF/DAT signaling pathway and inhibiting neuronal apoptosis, providing theoretical support for the application of ALC in PD.
Upconversion-based chiral nanoprobe for highly selective dual-mode sensing and bioimaging of hydrogen sulfide in vitro and in vivo
Chiral assemblies have become one of the most active research areas due to their versatility, playing an increasingly important role in bio-detection, imaging and therapy. In this work, chiral UCNPs/CuxOS@ZIF nanoprobes are prepared by encapsulating upconversion nanoparticles (UCNPs) and CuxOS nanoparticles (NPs) into zeolitic imidazolate framework-8 (ZIF-8). The novel excited-state energy distribution-modulated upconversion nanostructure (NaYbF4@NaYF4: Yb, Er) is selected as the fluorescence source and energy donor for highly efficient fluorescence resonance energy transfer (FRET). CuxOS NP is employed as chiral source and energy acceptor to quench upconversion luminescence (UCL) and provide circular dichroism (CD) signal. Utilizing the natural adsorption and sorting advantages of ZIF-8, the designed nanoprobe can isolate the influence of other common disruptors, thus achieve ultra-sensitive and highly selective UCL/CD dual-mode quantification of H2S in aqueous solution and in living cells. Notably, the nanoprobe is also capable of in vivo intra-tumoral H2S tracking. Our work highlights the multifunctional properties of chiral nanocomposites in sensing and opens a new vision and idea for the preparation and application of chiral nanomaterials in biomedical and biological analysis.The schematic of the preparation process of chiral UCNPs/CuxOS@ZIF nanoprobe, in vitro highly selective UCL/CD dual-mode sensing for hydrogen sulfide, and in vivo bioimaging.