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result(s) for
"Liu, Yichao"
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N Doping to ZnO Nanorods for Photoelectrochemical Water Splitting under Visible Light: Engineered Impurity Distribution and Terraced Band Structure
2015
Solution-based ZnO nanorod arrays (NRAs) were modified with controlled N doping by an advanced ion implantation method and were subsequently utilized as photoanodes for photoelectrochemical (PEC) water splitting under visible light irradiation. A gradient distribution of N dopants along the vertical direction of ZnO nanorods was realized. N doped ZnO NRAs displayed a markedly enhanced visible-light-driven PEC photocurrent density of ~160 μA/cm
2
at 1.1 V
vs.
saturated calomel electrode (SCE), which was about 2 orders of magnitude higher than pristine ZnO NRAs. The gradiently distributed N dopants not only extended the optical absorption edges to visible light region, but also introduced terraced band structure. As a consequence, N gradient-doped ZnO NRAs can not only utilize the visible light irradiation but also efficiently drive photo-induced electron and hole transfer
via
the terraced band structure. The superior potential of ion implantation technique for creating gradient dopants distribution in host semiconductors will provide novel insights into doped photoelectrode materials for solar water splitting.
Journal Article
Melatonin potentiates the cytotoxic effect of Neratinib in HER2+ breast cancer through promoting endocytosis and lysosomal degradation of HER2
2021
Complete blockade of the HER2 protein itself and HER signaling network is critical to achieving effective HER2-targeted therapies. Despite the success of HER2-targeted therapies, the diseases will relapse in a significant fraction of patients with HER2
+
breast cancers. How to improve the therapeutic efficacy of existing HER2-targeted agents remains an unmet clinical need. Here, we uncover a role of Melatonin in diminishing HER2-mediated signaling by destruction of HER2 protein. Mechanistically, Melatonin treatment attenuated the protective effect of the HSP90 chaperone complex on its client protein HER2, triggering ubiquitylation and subsequent endocytic lysosomal degradation of HER2. The inhibitory effect of Melatonin on HER2 signaling substantially enhanced the cytotoxic effects of the pan-HER inhibitor Neratinib in HER2
+
breast cancer cells. Lastly, we demonstrate that dual inhibition of HER2 by combined use of Melatonin and Neratinib effectively blocked the growth of HER2
+
breast tumor xenografts in vivo. Our findings shed light on the potential use of Melatonin in a novel dual HER2 blockade strategy for HER2
+
breast cancer treatment.
Journal Article
Photocuring Hyaluronic Acid/Silk Fibroin Hydrogel Containing Curcumin Loaded CHITOSAN Nanoparticles for the Treatment of MG-63 Cells and ME3T3-E1 Cells
by
Yu, Qingwen
,
Sun, Xing
,
Liu, Yichao
in
Anticancer properties
,
Bioavailability
,
Biocompatibility
2021
After an osteosarcoma excision, recurrence and bone defects are significant challenges for clinicians. In this study, the curcumin (Cur) loaded chitosan (CS) nanoparticles (CCNP) encapsulated silk fibroin (SF)/hyaluronic acid esterified by methacrylate (HAMA) (CCNPs-SF/HAMA) hydrogel for the osteosarcoma therapy and bone regeneration was developed by photocuring and ethanol treatment. The micro or nanofibers networks were observed in the CCNPs-SF/HAMA hydrogel. The FTIR results demonstrated that alcohol vapor treatment caused an increase in β-sheets of SF, resulting in the high compression stress and Young’s modulus of CCNPs-SF/HAMA hydrogel. According to the water uptake analysis, SF caused a slight decrease in water uptake of CCNPs-SF/HAMA hydrogel while CCNPs could enhance the water uptake of it. The swelling kinetic results showed that both the CCNPs and the SF increased the swelling ratio of CCNPs-SF/HAMA hydrogel. The accumulative release profile of CCNPs-SF/HAMA hydrogel showed that the release of Cur from CCNPs-SF/HAMA hydrogel was accelerated when pH value was decreased from 7.4 to 5.5. Besides, compared with CCNPs, the CCNPs-SF/HAMA hydrogel had a more sustainable drug release, which was beneficial for the long-term treatment of osteosarcoma. In vitro assay results indicated that CCNPs-SF/HAMA hydrogel with equivalent Cur concentration of 150 μg/mL possessed both the effect of anti-cancer and promoting the proliferation of osteoblasts. These results suggest that CCNPs-SF/HAMA hydrogel with superior physical properties and the bifunctional osteosarcoma therapy and bone repair may be an excellent candidate for local cancer therapy and bone regeneration.
Journal Article
An explainable covariate compartmental model for predicting the spatio-temporal patterns of dengue in Sri Lanka
by
Fransson, Peter
,
Liyanage, Prasad
,
Liu, Yichao
in
Biology and Life Sciences
,
Climate
,
Computational Biology
2025
A majority of all infectious diseases manifest some climate-sensitivity. However, many of those sensitivities are not well understood as meteorological drivers of infectious diseases co-occur with other drivers exhibiting complex non-linear influences and feedback. This makes it hard to dissect their individual contributions. Here we apply a novel deep learning Explainable AI (XAI) compartment model with covariate drivers and dynamic feedback to predict and explain the dengue incidence across Sri Lanka. We compare the compartmental Susceptible-Exposed-Infected-Recovered (SEIR) model to a deep learning model without a compartmental structure. We find that the covariate compartmental hybrid model performs better and can describe drivers of the dengue spatiotemporal incidence over time. The strongest drivers in our model in order of importance are precipitation, socio-demographics, and normalized vegetation index. The novel method demonstrated can be used to leverage known infectious disease dynamics while accounting for the influence of other drivers and different population immunity contexts. While allowing for interpretation of the covariate driver influences, the approach bridges the gap between dynamical compartmental and data driven dynamical models.
Journal Article
Comparative Analyses of Euonymus Chloroplast Genomes: Genetic Structure, Screening for Loci With Suitable Polymorphism, Positive Selection Genes, and Phylogenetic Relationships Within Celastrineae
2021
In this study, we assembled and annotated the chloroplast (cp) genome of the Euonymus species Euonymus fortunei , Euonymus phellomanus , and Euonymus maackii , and performed a series of analyses to investigate gene structure, GC content, sequence alignment, and nucleic acid diversity, with the objectives of identifying positive selection genes and understanding evolutionary relationships. The results indicated that the Euonymus cp genome was 156,860–157,611bp in length and exhibited a typical circular tetrad structure. Similar to the majority of angiosperm chloroplast genomes, the results yielded a large single-copy region (LSC) (85,826–86,299bp) and a small single-copy region (SSC) (18,319–18,536bp), separated by a pair of sequences (IRA and IRB; 26,341–26,700bp) with the same encoding but in opposite directions. The chloroplast genome was annotated to 130–131 genes, including 85–86 protein coding genes, 37 tRNA genes, and eight rRNA genes, with GC contents of 37.26–37.31%. The GC content was variable among regions and was highest in the inverted repeat (IR) region. The IR boundary of Euonymus happened expanding resulting that the rps19 entered into IR region and doubled completely. Such fluctuations at the border positions might be helpful in determining evolutionary relationships among Euonymus . The simple-sequence repeats (SSRs) of Euonymus species were composed primarily of single nucleotides (A)n and (T)n, and were mostly 10–12bp in length, with an obvious A/T bias. We identified several loci with suitable polymorphism with the potential use as molecular markers for inferring the phylogeny within the genus Euonymus . Signatures of positive selection were seen in rpoB protein encoding genes. Based on data from the whole chloroplast genome, common single copy genes, and the LSC, SSC, and IR regions, we constructed an evolutionary tree of Euonymus and related species, the results of which were consistent with traditional taxonomic classifications. It showed that E. fortunei sister to the Euonymus japonicus , whereby E. maackii appeared as sister to Euonymus hamiltonianus . Our study provides important genetic information to support further investigations into the phylogenetic development and adaptive evolution of Euonymus species.
Journal Article
Effect of enzyme preparation and extrusion puffing treatment on sorghum straw silage fermentation
2024
In this study, the effects on silage performance and microbial community of sorghum straw treated with the addition of enzymes (cellulase (CE), xylanase (XE)) and extrusion puffing technology, combined with SEM, XRD, and FTIR techniques, were thoroughly investigated. The results showed that the enzyme preparations, especially xylanase, significantly improved the nutritional value and fermentation efficiency of straw and enhanced the silage effect. Extruding significantly changes the surface structure of the straw, increasing the surface area and porosity, and promoting the attachment of microorganisms. This study not only optimized the sorghum straw silage performance but also provided technical support for the efficient use of straw resources, which is of great significance for the sustainable development of animal husbandry and the resource utilization of agricultural waste.
Journal Article
The relationship between atmospheric particulate matter, leaf surface microstructure, and the phyllosphere microbial diversity of Ulmus L
by
Xu, Liren
,
Liu, Chong
,
Liu, Yichao
in
Agricultural microbiology
,
Agricultural research
,
Agriculture
2024
Background
Plants can retain atmospheric particulate matter (PM) through their unique foliar microstructures, which has a profound impact on the phyllosphere microbial communities. Yet, the underlying mechanisms linking atmospheric particulate matter (PM) retention by foliar microstructures to variations in the phyllosphere microbial communities remain a mystery. In this study, we conducted a field experiment with ten
Ulmus
lines. A series of analytical techniques, including scanning electron microscopy, atomic force microscopy, and high-throughput amplicon sequencing, were applied to examine the relationship between foliar surface microstructures, PM retention, and phyllosphere microbial diversity of
Ulmus
L.
Results
We characterized the leaf microstructures across the ten
Ulmus
lines. Chun exhibited a highly undulated abaxial surface and dense stomatal distribution. Langya and Xingshan possessed dense abaxial trichomes, while Lieye, Zuiweng, and Daguo had sparsely distributed, short abaxial trichomes. Duomai, Qingyun, and Lang were characterized by sparse stomata and flat abaxial surfaces, whereas Jinye had sparsely distributed but extensive stomata. The mean leaf retention values for total suspended particulate (TSP), PM
2.5
, PM
2.5-10
, PM
10-100
, and PM
> 100
were 135.76, 6.60, 20.10, 90.98, and 13.08 µg·cm
− 2
, respectively. Trichomes substantially contributed to PM
2.5
retention, while larger undulations enhanced PM
2.5-10
retention, as evidenced by positive correlations between PM
2.5
and abaxial trichome density and between PM
2.5-10
and the adaxial raw microroughness values. Phyllosphere microbial diversity patterns varied among lines, with bacteria dominated by
Sediminibacterium
and fungi by
Mycosphaerella
,
Alternaria
, and
Cladosporium
. Redundancy analysis confirmed that dense leaf trichomes facilitated the capture of PM
2.5
-associated fungi, while bacteria were less impacted by PM and struggled to adhere to leaf microstructures. Long and dense trichomes provided ideal microhabitats for retaining PM-borne microbes, as evidenced by positive feedback loops between PM
2.5
, trichome characteristics, and the relative abundances of microorganisms like
Trichoderma
and
Aspergillus
.
Conclusions
Based on our findings, a three-factor network profile was constructed, which provides a foundation for further exploration into how different plants retain PM through foliar microstructures, thereby impacting phyllosphere microbial communities.
Journal Article
Three-dimensional magnetic cloak working from d.c. to 250 kHz
2015
Invisible cloaking is one of the major outcomes of the metamaterial research, but the practical potential, in particular for high frequencies (for example, microwave to visible light), is fatally challenged by the complex material properties they usually demand. On the other hand, it will be advantageous and also technologically instrumental to design cloaking devices for applications at low frequencies where electromagnetic components are favourably uncoupled. In this work, we vastly develop the bilayer approach to create a three-dimensional magnetic cloak able to work in both static and dynamic fields. Under the quasi-static approximation, we demonstrate a perfect magnetic cloaking device with a large frequency band from 0 to 250 kHz. The practical potential of our device is experimentally verified by using a commercial metal detector, which may lead us to having a real cloaking application where the dynamic magnetic field can be manipulated in desired ways.
The development of invisibility cloaks which function at low frequencies are of practical importance, especially for magnetic fields involved in modern technologies. Here, Zhu
et al
. develop the bilayer approach to create a three-dimensional magnetic cloak able to work in both static and dynamic fields.
Journal Article
Investigation on thermal kinetic behavior of 5 aminotetrazole/sodium periodate gas generator
2025
This study presents the design of a gas-generating formulation with a stoichiometric 5-aminotetrazole/sodium periodate. TG-FTIR-MS analysis was used to investigate the thermal decomposition behavior of the gas generator. The thermal kinetic parameters were calculated by non-isothermal kinetic methods to gain insight into the reaction mechanism. The results of this study demonstrate a distinct decomposition process for this gas-generating agent compared to conventional 5AT-based formulations. Specifically, it eliminates the formation of melamine through deamination polymerization and subsequent deamination polymerization processes, directly decomposing into amino cyanic acid (NH
2
CN), hydrogen cyanide (HCN), ammonia (NH
3
), and nitrogen gas (N
2
). Kinetic calculations were performed using model-free methods and model-fitting methods. With the addition of NaIO
4
, the decomposition activation energy of the first stage was reduced to 180 kJ/mol by 100 kJ/mol, making the decomposition of 5AT easier. The reaction process in the first stage followed a reaction order model of F3/2. The results of this study contribute to better understanding of the thermal kinetics and reaction mechanism of 5AT/NaIO
4
system, which is significant for improving the decomposition efficiency of 5AT and for gas generator design.
Journal Article
Increased BMSC exosomal miR-140-3p alleviates bone degradation and promotes bone restoration by targeting Plxnb1 in diabetic rats
2022
Background
Diabetes mellitus (DM) is considered to be an important factor for bone degeneration disorders such as bone defect nonunion, which is characterized by physical disability and tremendous economy cost to families and society. Exosomal
miRNAs
of BMSCs have been reported to participate in osteoblastogenesis and modulating bone formation. However, their impacts on the development of bone degeneration in DM are not yet known. The role of
miRNAs
in BMSCs exosomes on regulating hyperglycemia bone degeneration was investigated in the present study.
Results
The osteogenic potential in bone defect repair of exosomes derived from diabetes mellitus BMSCs derived exosomes (DM-Exos) were revealed to be lower than that in normal BMSCs derived exosomes (N-Exos) in vitro and in vivo. Here, we demonstrate that
miR-140-3p
level was significantly altered in exosomes derived from BMSCs, ADSCs and serum from DM rats. In in vitro experiments, upregulated
miR-140-3p
exosomes promoted DM BMSCs differentiation into osteoblasts. The effects were exerted by
miR-140-3p
targeting
plxnb1
, plexin B1 is the receptor of semaphoring 4D(Sema4D) that inhibited osteocytes differentiation, thereby promoting bone formation. In DM rats with bone defect,
miR-140-3p
upregulated exosomes were transplanted into injured bone and accelerated bone regeneration. Besides,
miR-140-3p
in the exosomes was transferred into BMSCs and osteoblasts and promoted bone regeneration by targeting the plexin B1/RohA/ROCK signaling pathway.
Conclusions
Normal-Exos and miR-140-3p overexpressed-Exos accelerated diabetic wound healing by promoting the osteoblastogenesis function of BMSCs through inhibition plexin B1 expression which is the receptor of Sema4D and the plexin B1/RhoA/ROCK pathway compared with diabetes mellitus-Exos. This offers a new insight and a new therapy for treating diabetic bone unhealing.
Graphical Abstract
Journal Article