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result(s) for
"Lorin, Mathieu"
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Analysis of young Miscanthus × giganteus yield variability: a survey of farmers’ fields in east central France
by
Lorin, Mathieu
,
Bazot, Mathieu
,
Lesur‐Dumoulin, Claire
in
Agricultural production
,
bioenergy
,
Biomass
2016
Miscanthus × giganteus is often regarded as one of the most promising crops to produce bioenergy because it is renowned for its high biomass yields, combined with low input requirements. However, its productivity has been mainly studied in experimental conditions. Our study aimed at characterizing and explaining young M. giganteus yield variability on a farmers’ field network located in the supply area of a cooperative society in east central France. It included the first three growth years of the crop. We defined and calculated a set of indicators of limiting factors that could be involved in yield variations and used the mixed‐model method to identify those explaining most of the yield variation. Commercial yields averaged 8.1 and 12.8 t DM ha−1 for the second and third growth year, respectively. However, these mean results concealed a high variability, ranging from 3 to 19 t DM ha−1. Commercial yields, measured on whole fields, were on average 20% lower than plot yields, measured on a small area (two plots of 25 m2). Yields were found to be much more related to shoot density than to shoot mass, and particularly to the shoot density established at the end of the planting year. We highlighted that planting success was decisive and was built during the whole plantation year. Fields with the lowest yields also had the highest weed cover, which was influenced by the distance between the field and the farmhouse, the preceding crop and the soil type. Our findings show that growing young M. giganteus on farmers’ fields involves limiting factors different from those commonly reported in the literature for experimental conditions and they could be useful to assess the economic and environmental impacts of growing M. giganteus on farmers’ fields. They could also stimulate the discussion about growing bioenergy crops on marginal lands.
Journal Article
Interactions between Plants and Plant-Soil in Functionally Complex Mixtures including Grass Pea, Faba Bean and Niger, Intercropped with Oilseed Rape
by
Fustec, Joëlle
,
Hédan, Marie
,
Valantin-Morison, Muriel
in
Agricultural sciences
,
Agronomy
,
annuals
2021
Winter oilseed rape (OSR) can be grown intercropped with frost-sensitive service plant mixtures. This practice may reduce weed pressure and contribute to providing N for OSR after service plant freezing. However, there is little knowledge of how plants interact together and with the soil in diverse annual crop mixtures. To assess these interactions, two contrasting legume service plants were selected: faba bean and grass pea, as well as a non-legume, the niger plant. OSR and the legumes were then grown in mesocosms alone or intercropped in mixtures of two to four species. The biomass, N contents, N2 fixation, and soil substrate-induced respiration were measured. A single species mostly drove the total dry biomass and the amount of N accumulated by the cover, OSR and faba bean for dry weight and N contents, respectively. Grass pea was highly sensitive to competition with OSR, and its N2 fixation was lower than that of faba bean. The addition of niger did not lead to additional N2 fixation of legumes or total N accumulation and contributed to reducing OSR biomass. The specific composition of the plant mixture did not explain the soil microorganism activity.
Journal Article
Determinants of oilseed rape-service plant intercropping performance variability across a farmers’ fields network in Western Switzerland
by
Ecole Supérieure des Agricultures (ESA)
,
Fustec, Joëlle
,
Légumineuses, Ecophysiologie Végétale, Agroécologie (LEVA) ; Ecole Supérieure des Agricultures (ESA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
in
Agricultural practices
,
Agriculture
,
autumn
2024
Abstract The intercropping of winter oilseed rape with frost-sensitive service plants can provide a diversity of services including weed control and N supply for oilseed rape. This practice started to be adopted by farmers and has therefore become one of the most popular intercropping in Western Europe. However, in Switzerland, such intercropping leads to contrasting yields. The growth of service plants and the benefits they provide have also been found to be variable. The factors explaining these variabilities remain unclear. Our study aimed to better understand this variability under a temperate climate thanks to the regional agronomic diagnosis framework. In this study, we first investigated the main factors explaining this variability and then aimed to rank them to identify ways to better manage such intercropping systems. A network of 28 farmers’ fields planted with winter oilseed rape intercropped with service plant mixtures was studied. Farmers’ practices were diverse in terms of specific composition of the service plant mixture, pest management, and fertilization. We observed that the growth of oilseed rape and service plants in fall was highly variable. We determined that in late fall, the main drivers of the service plant mixture dry weight were specific composition of the mixture and precipitation. The introduction of buckwheat in the service plant mixture enhanced its late fall biomass. The oilseed rape grain yields ranged from 0.4 to 5.0 t ha −1 and were lower than that of the local reference in 75% of the fields. This was mainly explained by insect pest damage in spring due to a very limited use of insecticide in our field network combined with a lack of alternative pest management strategies. This work provides further elements to investigate the causes leading to the high variability we observed, together with the local observations that will benefit the farmers.
Journal Article
Analysis of young Miscanthus giganteu s yield variability: a survey of farmers' fields in east central France
2016
Miscanthus giganteus is often regarded as one of the most promising crops to produce bioenergy because it is renowned for its high biomass yields, combined with low input requirements. However, its productivity has been mainly studied in experimental conditions. Our study aimed at characterizing and explaining young M. giganteus yield variability on a farmers' field network located in the supply area of a cooperative society in east central France. It included the first three growth years of the crop. We defined and calculated a set of indicators of limiting factors that could be involved in yield variations and used the mixed-model method to identify those explaining most of the yield variation. Commercial yields averaged 8.1 and 12.8 t DM ha super(-1) for the second and third growth year, respectively. However, these mean results concealed a high variability, ranging from 3 to 19 t DM ha super(-1) . Commercial yields, measured on whole fields, were on average 20% lower than plot yields, measured on a small area (two plots of 25 m super(2)). Yields were found to be much more related to shoot density than to shoot mass, and particularly to the shoot density established at the end of the planting year. We highlighted that planting success was decisive and was built during the whole plantation year. Fields with the lowest yields also had the highest weed cover, which was influenced by the distance between the field and the farmhouse, the preceding crop and the soil type. Our findings show that growing young M. giganteus on farmers' fields involves limiting factors different from those commonly reported in the literature for experimental conditions and they could be useful to assess the economic and environmental impacts of growing M. giganteus on farmers' fields. They could also stimulate the discussion about growing bioenergy crops on marginal lands.
Journal Article
Determinants of oilseed rape-service plant intercropping performance variability across a farmers’ fields network in Western Switzerland
by
Fustec, Joëlle
,
Légumineuses, Ecophysiologie Végétale, Agroécologie (LEVA) ; Ecole Supérieure des Agricultures (ESA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
,
This work has been done thanks to the financial support of Agroscope, UFA Samen,Nutriswiss and Florin as part of the ICARO project (Identification of Constraints and Assets offrost-sensitive intercrop with Rapeseed in Organic and conventional production systems.)
2024
The intercropping of winter oilseed rape with frost-sensitive service plants can provide a diversity of services including weed control and N supply for oilseed rape. This practice started to be adopted by farmers and has therefore become one of the most popular intercropping in Western Europe. However, in Switzerland, such intercropping leads to contrasting yields. The growth of service plants and the benefits they provide have also been found to be variable. The factors explaining these variabilities remain unclear. Our study aimed to better understand this variability under a temperate climate thanks to the regional agronomic diagnosis framework. In this study, we first investigated the main factors explaining this variability and then aimed to rank them to identify ways to better manage such intercropping systems. A network of 28 farmers' fields planted with winter oilseed rape intercropped with service plant mixtures was studied. Farmers' practices were diverse in terms of specific composition of the service plant mixture, pest management, and fertilization. We observed that the growth of oilseed rape and service plants in fall was highly variable. We determined that in late fall, the main drivers of the service plant mixture dry weight were specific composition of the mixture and precipitation. The introduction of buckwheat in the service plant mixture enhanced its late fall biomass. The oilseed rape grain yields ranged from 0.4 to 5.0 t ha -1 and were lower than that of the local reference in 75% of the fields. This was mainly explained by insect pest damage in spring due to a very limited use of insecticide in our field network combined with a lack of alternative pest management strategies. This work provides further elements to investigate the causes leading to the high variability we observed, together with the local observations that will benefit the farmers.
Journal Article
Infection of lung megakaryocytes and platelets by SARS-CoV-2 anticipate fatal COVID-19
by
Valdebenito, Silvana
,
Capron, Claude
,
Bomsel, Morgane
in
Antiviral agents
,
Antiviral drugs
,
Autopsies
2022
SARS-CoV-2, although not being a circulatory virus, spread from the respiratory tract resulting in multiorgan failures and thrombotic complications, the hallmarks of fatal COVID-19. A convergent contributor could be platelets that beyond hemostatic functions can carry infectious viruses. Here, we profiled 52 patients with severe COVID-19 and demonstrated that circulating platelets of 19 out 20 non-survivor patients contain SARS-CoV-2 in robust correlation with fatal outcome. Platelets containing SARS-CoV-2 might originate from bone marrow and lung megakaryocytes (MKs), the platelet precursors, which were found infected by SARS-CoV-2 in COVID-19 autopsies. Accordingly, MKs undergoing shortened differentiation and expressing anti-viral IFITM1 and IFITM3 RNA as a sign of viral sensing were enriched in the circulation of deadly COVID-19. Infected MKs reach the lung concomitant with a specific MK-related cytokine storm rich in VEGF, PDGF and inflammatory molecules, anticipating fatal outcome. Lung macrophages capture SARS-CoV-2-containing platelets in vivo. The virus contained by platelets is infectious as capture of platelets carrying SARS-CoV-2 propagates infection to macrophages in vitro, in a process blocked by an anti-GPIIbIIIa drug. Altogether, platelets containing infectious SARS-CoV-2 alter COVID-19 pathogenesis and provide a powerful fatality marker. Clinical targeting of platelets might prevent viral spread, thrombus formation and exacerbated inflammation at once and increase survival in COVID-19.
Journal Article
Sustained HIV remission after allogeneic hematopoietic stem cell transplantation with wild-type CCR5 donor cells
by
Decosterd, Laurent
,
Mélard, Adeline
,
Martinez-Picado, Javier
in
631/326/596/1787
,
692/308/575
,
Adult
2024
HIV cure has been reported for five individuals who underwent allogeneic hematopoietic stem cell transplantation (allo-HSCT) with cells from
CCR5Δ32
homozygous donors. By contrast, viral rebound has occurred in other people living with HIV who interrupted antiretroviral treatment after undergoing allo-HSCT, with cells mostly from wild-type
CCR5
donors. Here we report the case of a male individual who has achieved durable HIV remission following allo-HSCT with cells from an unrelated HLA-matched (9 of 10 matching for
HLA-A
,
HLA-B
,
HLA-C
,
HLA-DRB1
and
HLA-DQB1
alleles) wild-type
CCR5
donor to treat an extramedullary myeloid tumor. To date, plasma viral load has remained undetectable for 32 months after the interruption of antiretroviral treatment. Treatment with ruxolitinib has been maintained during this period to treat chronic graft-versus-host disease. Low levels of proviral DNA were detected sporadically after allo-HSCT, including defective but not intact HIV DNA. No virus could be amplified in cultures of CD4
+
T cells obtained after antiretroviral treatment interruption, while CD4
+
T cells remained susceptible to HIV-1 infection in vitro. Declines in HIV antibodies and undetectable HIV-specific T cell responses further corroborate the absence of viral rebound after antiretroviral treatment interruption. These results suggest that HIV remission could be achieved in the context of allo-HSCT with wild-type
CCR5
.
HIV remission was achieved for 32 months after allogeneic hematopoietic stem cell transplantation with wild-type
CCR5
donor cells.
Journal Article
Antibody avidity measurements in recipients of Cervarix® vaccine following a two-dose schedule or a three-dose schedule
by
Lockman, Laurence
,
Giannini, Sandra L.
,
Fochesato, Michel
in
Adolescent
,
Adult
,
Allergy and Immunology
2014
•Cervarix® is a licenced 3-dose HPV vaccine for preventing cervical cancer.•Avidity indices (AIs) can inform on the quality of HPV-specific antibody responses.•At least 1.27-fold changes in AIs were detected in samples from Cervarix® trials.•AIs appeared similar after the final dose of 2 (0–6 month)- or 3 (0–1–6 month)-dose regimens.•This study supports the adoption of a 2-dose regimen in 9–14 year old girls.
The HPV-16/18 vaccine (Cervarix®) is a prophylactic vaccine for the prevention of cervical cancer and contains recombinant virus-like particles (VLPs) assembled from the L1 major capsid proteins of human papillomavirus (HPV) strains 16 and 18. Although a correlate of protection has yet to be identified, HPV-specific antibodies are thought to prevent virus infection of the genital mucosa. Therefore, antigen-specific antibodies as assessed by ELISA or pseudovirion-based neutralisation assay are frequently measured in clinical trials to substantiate the immune responses induced by the vaccine. Measuring antigen-antibody binding avidities, which reflects the degree of affinity maturation in the B-cells, is another valuable method to assess the quality of the antibody responses. Here we describe the antigen-specific antibody avidities in samples taken from a clinical trial examining the feasibility of adopting a two-dose (Months 0 and 6) schedule for 9–14 year olds instead of the three-dose schedule (Months 0, 1 and 6). Antibody avidity (i.e. avidity index [AI]) was determined in the ELISA by the ratio of antibody concentrations in serum samples treated or not with the chaotropic agent NaSCN. Importantly, in the comparison between the groups of two-dose and three-dose recipients, no differences in AIs were observed at Months 7, 24 and 48. The results suggest that from Month 7 to 48, the quality of the antibody response in terms of avidity was similar in the two-dose recipients to that in the three-dose recipients. Hence these results support the adoption of a two-dose schedule in 9–14 year-old girls.
Journal Article
Antibody avidity measurements in recipients ofCervarix?vaccine following a two-dose schedule or a three-dose schedule
by
Lockman, Laurence
,
Fochesato, Michel
,
Giannini, Sandra L
in
Cervical cancer
,
Human papillomavirus
,
Immunization
2014
The HPV-16/18 vaccine (Cervarix®) is a prophylactic vaccine for the prevention of cervical cancer and contains recombinant virus-like particles (VLPs) assembled from the L1 major capsid proteins of human papillomavirus (HPV) strains 16 and 18. Although a correlate of protection has yet to be identified, HPV-specific antibodies are thought to prevent virus infection of the genital mucosa. Therefore, antigen-specific antibodies as assessed by ELISA or pseudovirion-based neutralisation assay are frequently measured in clinical trials to substantiate the immune responses induced by the vaccine. Measuring antigen-antibody binding avidities, which reflects the degree of affinity maturation in the B-cells, is another valuable method to assess the quality of the antibody responses. Here we describe the antigen-specific antibody avidities in samples taken from a clinical trial examining the feasibility of adopting a two-dose (Months 0 and 6) schedule for 9-14 year olds instead of the three-dose schedule (Months 0, 1 and 6). Antibody avidity (i.e. avidity index [AI]) was determined in the ELISA by the ratio of antibody concentrations in serum samples treated or not with the chaotropic agent NaSCN. Importantly, in the comparison between the groups of two-dose and three-dose recipients, no differences in AIs were observed at Months 7, 24 and 48. The results suggest that from Month 7 to 48, the quality of the antibody response in terms of avidity was similar in the two-dose recipients to that in the three-dose recipients. Hence these results support the adoption of a two-dose schedule in 9-14 year-old girls.
Journal Article
Antibody avidity measurements in recipients of Cervarix registered vaccine following a two-dose schedule or a three-dose schedule
2014
The HPV-16/18 vaccine ( registered ) is a prophylactic vaccine for the prevention of cervical cancer and contains recombinant virus-like particles (VLPs) assembled from the L1 major capsid proteins of human papillomavirus (HPV) strains 16 and 18. Although a correlate of protection has yet to be identified, HPV-specific antibodies are thought to prevent virus infection of the genital mucosa. Therefore, antigen-specific antibodies as assessed by ELISA or pseudovirion-based neutralisation assay are frequently measured in clinical trials to substantiate the immune responses induced by the vaccine. Measuring antigen-antibody binding avidities, which reflects the degree of affinity maturation in the B-cells, is another valuable method to assess the quality of the antibody responses. Here we describe the antigen-specific antibody avidities in samples taken from a clinical trial examining the feasibility of adopting a two-dose (Months 0 and 6) schedule for 9-14 year olds instead of the three-dose schedule (Months 0, 1 and 6). Antibody avidity (i.e. avidity index [AI]) was determined in the ELISA by the ratio of antibody concentrations in serum samples treated or not with the chaotropic agent NaSCN. Importantly, in the comparison between the groups of two-dose and three-dose recipients, no differences in AIs were observed at Months 7, 24 and 48. The results suggest that from Month 7 to 48, the quality of the antibody response in terms of avidity was similar in the two-dose recipients to that in the three-dose recipients. Hence these results support the adoption of a two-dose schedule in 9-14 year-old girls.
Journal Article