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"Lu, Xiaoming"
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Development of plant systemic resistance by beneficial rhizobacteria: Recognition, initiation, elicitation and regulation
2022
A plant growing in nature is not an individual, but it holds an intricate community of plants and microbes with relatively stable partnerships. The microbial community has recently been demonstrated to be closely linked with plants since their earliest evolution, to help early land plants adapt to environmental threats. Mounting evidence has indicated that plants can release diverse kinds of signal molecules to attract beneficial bacteria for mediating the activities of their genetics and biochemistry. Several rhizobacterial strains can promote plant growth and enhance the ability of plants to withstand pathogenic attacks causing various diseases and loss in crop productivity. Beneficial rhizobacteria are generally called as plant growth-promoting rhizobacteria (PGPR) that induce systemic resistance (ISR) against pathogen infection. These ISR-eliciting microbes can mediate the morphological, physiological and molecular responses of plants. In the last decade, the mechanisms of microbial signals, plant receptors, and hormone signaling pathways involved in the process of PGPR-induced ISR in plants have been well investigated. In this review, plant recognition, microbial elicitors, and the related pathways during plant-microbe interactions are discussed, with highlights on the roles of root hair-specific syntaxins and small RNAs in the regulation of the PGPR-induced ISR in plants.
Journal Article
Species asynchrony and response diversity determine multifunctional stability of natural grasslands
by
Bai, Yongfei
,
Lu, Xiaoming
,
Sasaki, Takehiro
in
Biodiversity
,
biodiversity and ecosystem functioning
,
Carbon sequestration
2019
1. A growing body of empirical evidence has suggested that biodiversity affects the simultaneous performance of multiple ecosystem functions (i.e. ecosystem multifunctionality). Given increasing environmental variability and uncertainty under global change, an emerging question is how biodiversity influences the stability of multiple functions (i.e. multifunctional stability). We currently know little, however, about the determinants and mechanisms of multifunctional stability, which is of practical importance for ensuring the sustainable provision of multiple functions. 2. Here, we examined mechanisms contributing to stability (quantified as the ratio of the mean to the standard deviation) of multiple functions related to ecosystem productivity and carbon sequestration, including plant above-ground and belowground productivity, litter production, gross primary productivity and ecosystem respiration, in a large grassland biodiversity experiment in Inner Mongolia. 3. We found that community-wide species asynchrony was a strong driver to stabilize multiple functions. Community-wide asynchrony mediated the positive effects of species richness and response diversity (describing how species with similar effects on ecosystem function respond differently to environmental change) on multifunctional stability. However, species richness had a negative direct effect on multifunctional stability because, although it increased the averaged temporal mean of multiple functions, it strongly increased the averaged temporal standard deviation of multiple functions. The overall effects of species richness on multifunctional stability were thus negative, whereas those of response diversity were positive. 4. Synthesis. The studied ecosystem functions related to ecosystem productivity and carbon sequestration are important in natural grasslands across the world. We conclude that species asynchrony and response diversity, rather than species richness, are key to the ecosystem multifunctional stability. The loss of response diversity and compensatory mechanisms would likely reduce the long-term sustainability of grasslands in the face of global change.
Journal Article
Warming-induced tipping points of Arctic and alpine shrub recruitment
by
Lu, Xiaoming
,
Babst, Flurin
,
Liang, Eryuan
in
Anthropogenic factors
,
Arctic Regions
,
Atmospheric circulation
2022
Shrub recruitment, a key component of vegetation dynamics beyond forests, is a highly sensitive indicator of climate and environmental change. Warming-induced tipping points in Arctic and alpine treeless ecosystems are, however, little understood. Here, we compare two long-term recruitment datasets of 2,770 shrubs from coastal East Greenland and from the Tibetan Plateau against atmospheric circulation patterns between 1871 and 2010 Common Era. Increasing rates of shrub recruitment since 1871 reached critical tipping points in the 1930s and 1960s on the Tibetan Plateau and in East Greenland, respectively. A recent decline in shrub recruitment in both datasets was likely related to warmer and drier climates, with a stronger May to July El Niño Southern Oscillation over the Tibetan Plateau and a stronger June to July Atlantic Multidecadal Oscillation over Greenland. Exceeding the thermal optimum of shrub recruitment, the recent warming trend may cause soil moisture deficit. Our findings suggest that changes in atmospheric circulation explain regional climate dynamics and associated response patterns in Arctic and alpine shrub communities, knowledge that should be considered to protect vulnerable high-elevation and high-latitude ecosystems from the cascading effects of anthropogenic warming.
Journal Article
Species interactions slow warming-induced upward shifts of treelines on the Tibetan Plateau
by
Zhu, Liping
,
Camarero, Jesús Julio
,
Ciais, Philippe
in
Biological Sciences
,
Climate change
,
Continental interfaces, environment
2016
The alpine treeline is commonly regarded as being sensitive to climatic warming because regeneration and growth of trees at treeline generally are limited by low temperature. The alpine treelines of the Tibetan Plateau (TP) occur at the highest elevations (4,900 m above sea level) in the Northern Hemisphere. Ongoing climatic warming is expected to shift treelines upward. Studies of treeline dynamics at regional and local scales, however, have yielded conflicting results, indicating either unchanging treeline elevations or upward shifts. To reconcile this conflict, we reconstructed in detail a century of treeline structure and tree recruitment at sites along a climatic gradient of 4 °C and mean annual rainfall of 650 mm on the eastern TP. Species interactions interacted with effects of warming on treeline and could outweigh them. Densification of shrubs just above treeline inhibited tree establishment, and slowed upward movement of treelines on a time scale of decades. Interspecific interactions are major processes controlling treeline dynamics that may account for the absence of an upward shift at some TP treelines despite continued climatic warming.
Journal Article
Generalized linear mixed quantile regression with panel data
2020
A new generalized linear mixed quantile model for panel data is proposed. This proposed approach applies GEE with smoothed estimating functions, which leads to asymptotically equivalent estimation of the regression coefficients. Random effects are predicted by using the best linear unbiased predictors (BLUP) based on the Tweedie exponential dispersion distributions which cover a wide range of distributions, including those widely used ones, such as the normal distribution, Poisson distribution and gamma distribution. A Taylor expansion of the quantile estimating function is used to linearize the random effects in the quantile process. The parameter estimation is based on the Newton-Raphson iteration method. Our proposed quantile mixed model gives consistent estimates that have asymptotic normal distributions. Simulation studies are carried out to investigate the small sample performance of the proposed approach. As an illustration, the proposed method is applied to analyze the epilepsy data.
Journal Article
Composition analysis and antioxidant properties of black garlic extract
2017
Black garlic produced from fresh garlic under controlled high temperature and humidity has strong antioxidant properties. To determine these compounds, five fractions (from F1 to F5) were separated and purified by elution with chloroform:methanol at different ratios (8:1, 6:1, 4:1, 2:1, and 0:1; v/v). The antioxidant activity of each fraction was analyzed. The results showed that F3 and F4 had higher phenolic contents and stronger 2,2-diphenyl-2-picrylhydrazyl radical scavenging activity than the others. Seven purified individual components were further separated using semipreparation high-performance liquid chromatography from these two intensely antioxidant fractions (F3 and F4), their structures were elucidated by high-performance liquid chromatography coupled to diode array detection, electrospray ionization, mass spectrometry, 1H nuclear magnetic resonance, and 13C nuclear magnetic resonance spectrometry. Three compounds including adenosine, uridine, and 2-acetylpyrrole were first identified in black garlic, except for 5-hydroxymethylfurfural, (1S, 3S)-1-methyl-1,2,3,4-tetrahydro-β-carboline-3-carboxylic acid, and (1R, 3S)-1-methyl-1,2,3,4-tetrahydro-β-carboline-3-carboxylic acid. The cellular antioxidant activities of uridine, adenosine, carboline alkaloids, 5-hydroxymethylfurfural, and ethyl acetate extracts were consistent with the results of in vitro experimental antioxidant properties. The results provide useful information for understanding the health benefits of black garlic products.
Black garlic has antioxidant activity. Seven materials were isolated and identified with silica gel, semiprep-HPLC, HPLC–DAD–ESI–MS analysis, and NMR from the ethyl acetate extraction of black garlic; adenosine, uridine, and 2-acetylpyrrole were first isolated and identified in black garlic. [Display omitted]
Journal Article
Characterization, Variables, and Antioxidant Activity of the Maillard Reaction in a Fructose–Histidine Model System
by
Zheng, Zhenjia
,
Qiao, Xuguang
,
Lu, Xiaoming
in
Acetic Acid - analysis
,
Amino acids
,
antioxidant activity
2018
Fructose and its polysaccharides are widely found in fruits and vegetables, with the Maillard reaction of fructose affecting food quality. This study aimed to investigate the Maillard reaction of fructose using a fructose–histidine model system. The reaction process was characterized using fluorescence spectroscopy and ultraviolet spectroscopy. The effects of temperature, initial reactant concentration, initial fructose concentration, initial histidine concentration, and initial pH value on the different stages of the Maillard reaction were studied. Reactant reduction, ultraviolet and fluorescence spectra, acetic acid content, 5-hydroxymethylfurfural (5-HMF) content, and browning intensity were evaluated. The results showed that increasing the temperature and reactant concentration promoted the condensation reaction of fructose and amino acid in the early stage, the formation of intermediate products with ultraviolet absorption and fluorescence in the intermediate stage, and the formation of pigment in the final stage. The 5-HMF concentration decreased with increasing histidine concentration and initial pH value. Changes in the shape of ultraviolet and fluorescence spectra showed that the initial pH value affected not only the reaction rate, but also the intermediate product types. The 1,1-diphenyl-2-picrylhydrazyl (DPPH) scavenging rate of the Maillard reaction products increased with increasing temperature, reactant concentration, and initial pH value.
Journal Article
Co-Delivery of Doxorubicin and SATB1 shRNA by Thermosensitive Magnetic Cationic Liposomes for Gastric Cancer Therapy
2014
In previous a study, we had developed a novel thermosensitive magnetic delivery system based on liposomes. This study aimed to evaluate the efficiency of this system for the co-delivery of both drugs and genes to the same cell and its anti-tumor effects on gastric cancer. Doxorubicin (DOX) and SATB1 shRNA vector were loaded into the co-delivery system, and in vitro DOX thermosensitive release activity, targeted gene silencing efficiency, targeted cellular uptake, in vitro cytotoxicity, as well as in vivo anti-tumor activity were determined. The results showed that this co-delivery system had desirable targeted delivery efficacy, DOX thermosensitive release and SATB1 gene silencing. Moreover, the co-delivery of DOX and SATB1 shRNA exhibited enhanced activity to inhibit gastric cancer cell growth in vitro and in vivo, compared to single delivery. In conclusion, the novel thermosensitive magnetic drug and gene co-delivery system has promising application in combined chemotherapy and gene therapy for gastric cancer.
Journal Article
Warming‐induced shrubline advance stalled by moisture limitation on the Tibetan Plateau
by
Wang, Yafeng
,
Peñuelas, Josep
,
Lu, Xiaoming
in
alpine plants
,
Alpine regions
,
Alpine shrubline
2021
Willows (Salix) are some of the most abundant shrubs in cold alpine and tundra biomes. In alpine regions, seed dispersal is not limiting upwards willow expansion, so the upslope shift of willow shrublines is assumed to be a response to climatic warming. Very little, however, is known about the recent spatiotemporal dynamics of alpine willow shrublines. The world's highest willow shrublines (ca 4900 m a.s.l.) are located on the Tibetan Plateau (TP) and provide a rare opportunity to test their sensitivity and responses to rapid warming and the associated increase in the demand for water in ecosystems. We used a new data set comprising 24 Salix shrubline plots along a 900‐km latitudinal gradient (30‒38°N) to reconstruct the rates of annual shrub recruitment and shifting shrubline positions since 1939. Shrub densification and shrubline advances were promoted by pronounced summer warming before 2010, contributing to widespread greening on the TP. These trends, however, reversed due to warming‐induced moisture limitation after 2010, which thus represented a tipping point of warming/drying trade‐offs. Climatic warming and drying are predicted to accelerate in the following decades, so alpine plant communities may be at an increasing risk of population decline or even range contraction.
Journal Article