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"Lukas, Scott"
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Evaluating locally available organic amendments to enhance soil health indicators for highbush blueberry production east of the Cascades in the U.S. Pacific Northwest
2025
While Oregon and Washington contribute approximately 60% of the total production of blueberries in the United States, there is still potential for growth on the east side of the Cascade Mountain Range in both states. The region is well suited to organic production of blueberries, but the soils tend to be sandy and low in organic matter. Currently, organic inputs used in blueberry systems are expensive and difficult to source in the region. Therefore, easily available alternatives that can foster productivity at a lesser cost are needed. An organic blueberry field trial was established in 2021 at Oregon State University’s Hermiston Agricultural Research and Extension Center to evaluate four organic amendments, including biochar, grape pomace compost, grape pomace co-composted with biochar, and woodchips (grower standard), each of which were either incorporated to a depth of 0.2 m or, with the exception of woodchips, banded on the soil surface. Soil samples were collected in September 2021 and 2022 and analyzed for a suite of soil health indicators and soil microbial community structure, including Soil pH, electrical conductivity, Total N, NH
4
-N, NO
3
-N, available P and K, soil organic matter, extractable organic carbon, active carbon, microbial biomass carbon, β-glucosidase enzyme activity, microbial respiration, and bacterial and fungal community structure and abundance. Results showed that incorporated compost resulted in higher soil organic matter, increased nutrient availability, and greater microbial activity than the other treatments. However, none of the treatments had any effect on the structure of the bacterial community, which by the end of the second year of the study was largely dominated by Acidobacteria, or on the structure of the fungal community, which in both years was dominated by Ascomycota and Mortierellomycota. Data collected from this study will help us understand the suitability of organic inputs to enhance soil health indices while improving resource use efficiency.
Journal Article
Worth the wait: effects of age of onset of marijuana use on white matter and impulsivity
by
Gruber, Staci A.
,
Dahlgren, Mary Kathryn
,
Lukas, Scott E.
in
Age of Onset
,
Biomedical and Life Sciences
,
Biomedicine
2014
Rationale
Marijuana (MJ) use continues to rise, and as the perceived risk of using MJ approaches an all-time historic low, initiation of MJ use is occurring at even younger ages. As adolescence is a critical period of neuromaturation, teens and emerging adults are at greater risk for experiencing the negative effects of MJ on the brain. In particular, MJ use has been shown to be associated with alterations in frontal white matter microstructure, which may be related to reports of increased levels of impulsivity in this population.
Objectives
The aim of this study was to examine the relationship between age of onset of MJ use, white matter microstructure, and reported impulsivity in chronic, heavy MJ smokers.
Methods
Twenty-five MJ smokers and 18 healthy controls underwent diffusion tensor imaging and completed the Barratt Impulsiveness Scale. MJ smokers were also divided into early onset (regular use prior to age 16) and late onset (age 16 or later) groups in order to clarify the impact of age of onset of MJ use on these variables.
Results
MJ smokers exhibited significantly reduced fractional anisotropy (FA) relative to controls, as well as higher levels of impulsivity. Earlier MJ onset was also associated with lower levels of FA. Interestingly, within the early onset group, higher impulsivity scores were correlated with lower FA, a relationship that was not observed in the late onset smokers.
Conclusions
MJ use is associated with white matter development and reported impulsivity, particularly in early onset smokers.
Journal Article
Long-term agro-management strategies shape soil bacterial community structure in dryland wheat systems
by
Calderon, Francisco
,
Singh, Shikha
,
Cappellazzi, Shannon B.
in
704/158/2456
,
704/158/855
,
Agricultural management
2023
Soil microbes play a crucial role in soil organic matter decomposition and nutrient cycling and are influenced by management practices. Therefore, quantifying the impacts of various agricultural management practices on soil microbiomes and their activity is crucial for making informed management decisions. This study aimed to assess the impact of various management systems on soil bacterial abundance and diversity, soil enzyme activities and carbon mineralization potential in wheat-based systems. To accomplish this, soil samples from 0 to 15 cm depth were collected from ongoing long-term field trials in eastern Oregon region under wheat (
Triticum aestivum
L.)-fallow (WF), WF with different tillage (WT), wheat-pea (
Pisum sativum
L.) (WP), WF under different crop residue management (CR) and natural undisturbed/unmanaged grassland pasture (GP). These trials consisted of an array of treatments like tillage intensities, nitrogen rates, organic amendments, and seasonal residue burning. This study was a part of the Soil Health Institute’s North American Project to Evaluate Soil Health measurements (NAPESHM). Bacterial community structure was determined using amplicon sequencing of the V4 region of 16SrRNA genes and followed the protocols of the Earth Microbiome Project. In addition, extracellular enzyme activities, and carbon mineralization potential (1d-CO
2
) were measured. Among different trials, 1d-CO
2
in WT, WP, and CR studies averaged 53%, 51% and 87% lower than GP systems, respectively. Enzyme activities were significantly greater in GP compared to the other managements and followed similar trend as respiration. We observed higher evenness in GP and higher richness in spring residue burning treatment of CR study. Our results indicated that species evenness is perhaps a better indicator of soil health in comparison to other indices in dryland wheat systems.
Journal Article
Lower dACC glutamate in cannabis users during early phase abstinence
2022
Glutamate plays an important role in continued use of and relapse to abused substances. However, its involvement in cannabis withdrawal is still unclear. We hypothesize that regional glutamate is associated with the cannabis withdrawal syndrome and recently examined possible association of glutamate with cannabis withdrawal, using magnetic resonance spectroscopy (MRS), in non-treatment-seeking cannabis users. We recruited 26 frequent cannabis users and 11 age-matched non-using controls. Of the 37, 20 users (8f/12m) and 10 controls (5f/5m) completed a verified 21-day abstinence protocol. Dorsal anterior cingulate cortex (dACC) glutamate and γ-amino butyric acid (GABA) were measured with proton MRS at baseline and on abstinent days 7 and 21 in conjunction with measures of cannabis withdrawal and craving (MCQ), sleep difficulties (PSQI) and mood state. We used ANOVA to examine group differences in glutamate and GABA from baseline through day 21 and used linear regression to evaluate correlations between intra-individual glutamate and withdrawal symptoms. We found that self-reported anxiety severity (HAMA) was correlated with urinary THC/Cr ratios at baseline (r = 0.768, p = 0.000076) and abstinent day 7 (r = 0.5636, p = 0.0097), dACC glutamate was significantly lower in the users compared with the controls from baseline through day 21 (F = 5.90, p = 0.022), changes in glutamate between baseline and abstinent day 21 had a significantly negative correlation with corresponding changes in craving (r = −0.72, p = 0.005) after adjusting for age, consumption of alcohol/cigarettes, sleep difficulties, and urinary THC levels. These findings provide preliminary evidence that dACC glutamate is associated with the cannabis withdrawal syndrome.
Journal Article
Denoising scanner effects from multimodal MRI data using linked independent component analysis
by
Smith, Stephen M.
,
Li, Huanjie
,
Nickerson, Lisa D.
in
Adult
,
Brain - diagnostic imaging
,
Brain research
2020
Pooling magnetic resonance imaging (MRI) data across research studies, or utilizing shared data from imaging repositories, presents exceptional opportunities to advance and enhance reproducibility of neuroscience research. However, scanner confounds hinder pooling data collected on different scanners or across software and hardware upgrades on the same scanner, even when all acquisition protocols are harmonized. These confounds reduce power and can lead to spurious findings. Unfortunately, methods to address this problem are scant. In this study, we propose a novel denoising approach that implements a data-driven linked independent component analysis (LICA) to identify scanner-related effects for removal from multimodal MRI to denoise scanner effects. We utilized multi-study data to test our proposed method that were collected on a single 3T scanner, pre- and post-software and major hardware upgrades and using different acquisition parameters. Our proposed denoising method shows a greater reduction of scanner-related variance compared with standard GLM confound regression or ICA-based single-modality denoising. Although we did not test it here, for combining data across different scanners, LICA should prove even better at identifying scanner effects as between-scanner variability is generally much larger than within-scanner variability. Our method has great promise for denoising scanner effects in multi-study and in large-scale multi-site studies that may be confounded by scanner differences.
Journal Article
Insula–Dorsal Anterior Cingulate Cortex Coupling is Associated with Enhanced Brain Reactivity to Smoking Cues
2015
The insula plays a critical role in maintaining nicotine dependence and reactivity to smoking cues. More broadly, the insula and the dorsal anterior cingulate cortex (dACC) are key nodes of the salience network (SN), which integrates internal and extrapersonal information to guide behavior. Thus, insula-dACC interactions may be integral in processing salient information such as smoking cues that facilitate continued nicotine use. We evaluated functional magnetic resonance imaging (fMRI) data from nicotine-dependent participants during rest, and again when they viewed smoking-related images. Greater insula-dACC coupling at rest was significantly correlated with enhanced smoking cue-reactivity in brain areas associated with attention and motor preparation, including the visual cortex, right ventral lateral prefrontal cortex, and the dorsal striatum. In an independent cohort, we found that insula-dACC connectivity was stable over 1-h delay and was not influenced by changes in subjective craving or expired carbon monoxide, suggesting that connectivity strength between these regions may be a trait associated with heightened cue-reactivity. Finally, we also showed that insula reactivity to smoking cues correlates with a rise in cue-reactivity throughout the entire SN, indicating that the insula's role in smoking cue-reactivity is not functionally independent, and may actually represent the engagement of the entire SN. Collectively, these data provide a more network-level understanding of the insula's role in nicotine dependence and shows a relationship between inherent brain organization and smoking cue-reactivity.
Journal Article
Food Intake and Reward Mechanisms in Patients with Schizophrenia: Implications for Metabolic Disturbances and Treatment with Second-Generation Antipsychotic Agents
by
Elman, Igor
,
Borsook, David
,
Lukas, Scott E
in
Adult and adolescent clinical studies
,
Animals
,
Antipsychotic Agents - therapeutic use
2006
Obesity is highly prevalent among patients with schizophrenia and is associated with detrimental health consequences. Although excessive consumption of fast food and pharmacotherapy with such second-generation antipsychotic agents (SGAs) as clozapine and olanzapine has been implicated in the schizophrenia/obesity comorbidity, the pathophysiology of this link remains unclear. Here, we propose a mechanism based on brain reward function, a relevant etiologic factor in both schizophrenia and overeating. A comprehensive literature search on neurobiology of schizophrenia and of eating behavior was performed. The collected articles were critically reviewed and relevant data were extracted and summarized within four key areas: (1) energy homeostasis, (2) food reward and hedonics, (3) reward function in schizophrenia, and (4) metabolic effects of the SGAs. A mesolimbic hyperdopaminergic state may render motivational/incentive reward system insensitive to low salience/palatability food. This, together with poor cognitive control from hypofunctional prefrontal cortex and enhanced hedonic impact of food, owing to exaggerated opioidergic drive (clinically manifested as pain insensitivity), may underlie unhealthy eating habits in patients with schizophrenia. Treatment with SGAs purportedly improves dopamine-mediated reward aspects, but at the cost of increased appetite and worsened or at least not improved opiodergic capacity. These effects can further deteriorate eating patterns. Pathophysiological and therapeutic implications of these insights need further validation via prospective clinical trials and neuroimaging studies.
Journal Article
Extended-release naltrexone (XR-NTX) attenuates brain responses to alcohol cues in alcohol-dependent volunteers: A bold FMRI study
by
Penetar, David M.
,
Lindsey, Kimberly P.
,
Mallya, Gopi
in
Addictive behaviors
,
Adult
,
Adult and adolescent clinical studies
2013
Oral naltrexone reduces heavy drinking, but is less consistent as an abstinence promoter, whereas once-monthly extended-release naltrexone (XR-NTX) also maintains abstinence. The present study sought to determine if alcohol cue reactivity is attenuated by XR-NTX. Twenty-eight detoxified alcohol-dependent adult male and female volunteers received a single i.m. injection of either XR-NTX or placebo under double-blind conditions. An fMRI/cue reactivity procedure was conducted immediately before and two weeks after injection. At baseline, alcohol-related visual and olfactory cues elicited significant increases in orbital and cingulate gyri, inferior frontal and middle frontal gyri. Subsequently, brain activation was significantly altered in XR-NTX-treated individuals. These affected brain regions are associated with the integration of emotion, cognition, reward, punishment, and learning/memory, suggesting that XR-NTX attenuates the salience of alcohol-related cues. Such an effect on brain function may interrupt the processes associated with “slips” and relapse, which may account for XR-NTX's ability to maintain abstinence.
•We exposed alcohol-dependent participants to alcohol and neutral cues during imaging•fMRI was measured before and 4 weeks after injection of extended release naltrexone•Naltrexone reduced the salience of olfactory and visual alcohol cues•Naltrexone altered the BOLD signal activation patterns•Naltrexone may interrupt the processes associated with “slips” and “relapse”
Journal Article
Influence of Treated Wastewater Irrigation on Soil Nutritional-Chemical Attributes Using Soil Quality Index
2021
Dwindling water resources have drawn global attention to the reuse of treated wastewater (TWW) for irrigation. However, the impact of continuous TWW applications on soil quality and the proper quantification and monitoring frameworks have not been well-understood. This study aims to provides an insight into the impact of flood irrigation of urban TWW on soil nutritional-chemical attributes and the potential application of multiple soil quality indices for a corn cropping system. To achieve that goal, we pursued the Total Data Set (TDS) and Minimum Data Set (MDS) approaches, as well as the Integrated Quality Index (IQI) and Nemoro Quality Index (NQI) models. A total of 17 soil nutritional-chemical indicators (0–50 cm depths) were determined for the soils irrigated with TWW (five sites) and well water (one site as control) in West Azerbaijan province in northwestern Iran. Results revealed a significant difference in the majority of soil nutritional-chemical attributes, IQI-TDS, NQI-TDS, IQI-MDS, NQI-MDS, and corn yield between the TWW-irrigated and well-irrigated soils. Irrigation with TWW resulted in a significant increase in the amount of organic matter and cation exchange capacity by 9–17% and 17–26%, respectively, macronutrients (N, P, K, Ca, and Mg) by 22–164%, and the majority of trace metals (Fe, Mn, Zn, and Cu) by 17–175%, suggesting an improvement in soil nutrients and an increase in productivity. Comparing to the soil in control sites, the TWW irrigation caused a notable increase in the values of IQI-TDS, NQI-TDS, IQI-MDS, and NQI-MDS models ranging 14.6–29.5%, 19.1–25.5%, 21.7–33.3%, and 18.4–23.7%, respectively. This implies that soil quality was ameliorated to a significant extent with TWW irrigation. These improvements resulted in a remarkable increase in corn yield ranging from 12.5% to 28.1%. The regression equations revealed that up to 78%, 47%, 72%, and 36% of the variance in the IQI-TDS, NQI-TDS, IQI-MDS, and NQI-MDS models, respectively, could be captured by corn yield. The results of the regression and correlation analyses showed that the IQI-MDS model was more accurate than the other models in assessing soil quality and predicting crop yield. These findings may be an effective and practical tool for policy making, implementation, and management of soil irrigated with TWW.
Journal Article
An Increase in Tobacco Craving Is Associated with Enhanced Medial Prefrontal Cortex Network Coupling
2014
Craving is a key aspect of drug dependence that is thought to motivate continued drug use. Numerous brain regions have been associated with craving, suggesting that craving is mediated by a distributed brain network. Whether an increase in subjective craving is associated with enhanced interactions among brain regions was evaluated using resting state functional magnetic imaging (fMRI) in nicotine dependent participants. We focused on craving-related changes in the orbital and medial prefrontal cortex (OMPFC) network, which also included the subgenual anterior cingulate cortex (sgACC) extending into the ventral striatum. Brain regions in the OMPFC network are not only implicated in addiction and reward, but, due to their rich anatomic interconnections, may serve as the site of integration across craving-related brain regions. Subjective craving and resting state fMRI were evaluated twice with an ∼1 hour delay between the scans. Cigarette craving was significantly increased at the end, relative to the beginning of the scan session. Enhanced craving was associated with heightened coupling between the OMPFC network and other cortical, limbic, striatal, and visceromotor brain regions that are both anatomically interconnected with the OMPFC, and have been implicated in addiction and craving. This is the first demonstration confirming that an increase in craving is associated with enhanced brain region interactions, which may play a role in the experience of craving.
Journal Article