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result(s) for
"Luo, Xingyu"
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Genomic landscape and genetic manipulation of the black soldier fly Hermetia illucens, a natural waste recycler
2020
The black soldier fly (BSF),
Hermetia illucens
(Diptera: Stratiomyidae), is renowned for its bioconversion of organic waste into a sustainable source of animal feed. We report a high-quality genome of 1.1 Gb and a consensus set of 16,770 gene models for this beneficial species. Compared to those of other dipteran species, the BSF genome has undergone a substantial expansion in functional modules related to septic adaptation, including immune system factors, olfactory receptors, and cytochrome P450s. We further profiled midgut transcriptomes and associated microbiomes of BSF larvae fed with representative types of organic waste. We find that the pathways related to digestive system and fighting infection are commonly enriched and that Firmicutes bacteria dominate the microbial community in BSF across all diets. To extend its potential practical applications, we further developed an efficient CRISPR/Cas9-based gene editing approach and implemented this to yield flightless and enhanced feeding capacity phenotypes, both of which could expand BSF production capabilities. Our study provides valuable genomic and technical resources for optimizing BSF lines for industrialization.
Journal Article
Analyzing the evolutionary trajectory of technological themes based on the BERTopic model: A case study in the field of artificial intelligence
by
Luo, Xingyu
,
Wu, Qing
,
Lv, Kun
in
Adaptation (Biology)
,
Artificial Intelligence
,
Bibliometrics
2025
As the wave of technological innovation propels national development into the future, technological advancement has emerged as a crucial pillar for enhancing international competitiveness. Unraveling the evolutionary trajectory of technologies and their associated themes provides a solid theoretical foundation for strategic decision-making in fostering future industrial technological upgrades, thereby aiding in seizing the initiative in technological innovation. This study, adopts a multi-source data perspective, employing the life cycle theory to delineate temporal windows. We use the BERTopic model to extract technological themes and construct a co-occurrence network of theme keywords. Three network centrality indices are computed to filter key theme terms, and the Word2Vec model is leveraged to calculate cosine similarities. Ultimately, we map out the evolutionary pathway of technological themes using Sankey diagrams. Taking the field of artificial intelligence as an example, the study found that the proposed method could effectively identify 48 technical theme keywords and analyze the technological evolution paths of these keywords in areas such as scenario applications, network services, human-computer interaction, intelligent detection, and natural language processing. Furthermore, all evaluation metrics of the model outperformed those of comparable topic models. The rationality of the empirical results was validated through examination against national policies and market application scenarios.
Journal Article
Investigation into the Multiphase Product Distribution and Evolution During Biomass Pyrolysis Using Wheat Straw and Pine Sawdust
2025
Understanding the formation mechanisms of three-phase products during biomass pyrolysis is essential for optimizing thermochemical conversion and enhancing the efficient utilization of renewable resources. In this study, wheat straw (WS) and pine sawdust (PS) were selected as representative feedstocks to investigate the thermal decomposition behavior and evolution characteristics of gas, liquid (tar), and solid (char) products during pyrolysis. Thermogravimetric analysis and kinetic modeling revealed that PS exhibited higher activation energy (75.44 kJ/mol) than WS (65.63 kJ/mol), indicating greater thermal resistance. Tar yield increased initially and then declined with temperature, peaking at 700 °C (37.79% for PS and 32.82% for WS), while the composition shifted from oxygenated compounds to polycyclic aromatic hydrocarbons as temperature rose. FTIR analysis demonstrated that most functional group transformations in char occurred below 400 °C, with aromatic structures forming above 300 °C and stabilizing beyond 700 °C. Gas product evolution showed that WS produced higher CO and H2 yields due to its composition, with CH4 generated in relatively lower amounts. These findings provide insights into biomass pyrolysis mechanisms and offer a theoretical basis for targeted regulation of product distributions in bioenergy applications.
Journal Article
Eradication of unresectable liver metastasis through induction of tumour specific energy depletion
2019
Treatment of liver metastasis experiences slow progress owing to the severe side effects. In this study, we demonstrate a strategy capable of eliminating metastatic cancer cells in a selective manner. Nucleus-targeting W
18
O
49
nanoparticles (WONPs) are conjugated to mitochondria-selective mesoporous silica nanoparticles (MSNs) containing photosensitizer (Ce6) through a Cathepsin B-cleavable peptide. In hepatocytes, upon the laser irradiation, the generated singlet oxygen species are consumed by WONPs, in turn leading to the loss of their photothermally heating capacity, thereby sparing hepatocyte from thermal damage induced by the laser illumination. By contrast, in cancer cells, the cleaved peptide linker allows WONPs and MSNs to respectively target nucleus and mitochondria, where the therapeutic powers could be unleashed, both photodynamically and photothermally. This ensures the energy production of cancer cells can be abolished. We further assess the underlying molecular mechanism at both gene and protein levels to better understand the therapeutic outcome.
Treatment of liver metastasis in cancer patients is associated with severe side effects. Here, the authors develop nucleus and mitochondria targeted nanoparticles, conjugated via a cathepsin B sensitive peptide to selectively target liver metastatic cells.
Journal Article
A gut commensal bacterium promotes black soldier fly larval growth and development partly via modulation of intestinal protein metabolism
2023
Black soldier fly (BSF), Hermetia illucens (L.) (Diptera: Stratiomyidae), is a promising bio-agent to transform organic wastes into valuable insect biomass, and the intestinal microbes play an essential role in this process. Here, we report that Citrobacter amalonaticus , a Gram-negative gut commensal bacterium of BSF larvae, can colonize the whole intestines of the larva and significantly promote the larval growth and development. The bacterial association with the larva had a marked impact on the larval transcriptome and modulated the expression of genes involved in dozens of biological pathways including host macro-nutrient metabolism and immune response. We investigated the underlying mechanisms driving the interaction and found that C. amalonaticus association can directly promote the expression of two gene families related to intestinal protein metabolism: Hitryp serine protease trypsin family and Himtp metallopeptidase family. To determine the gene function, we developed a symbiont-mediated double-strand RNA interference approach and successfully achieved gene knockdown in larval midgut in situ . Knockdown of the two gene families and protease inhibition in larval intestines attenuated the promoting effects on larval growth significantly. The results indicate that the gut symbiont promotes BSF larval growth partly via modulating the expression of the genes involved in intestinal protein metabolism. Taken together, this study establishes a novel genetic tool to study the insect functional genomics and the host-symbiont interaction and sheds light on the important roles of intestinal protein metabolism on the interaction. Black solider fly larvae and the gut microbiota can recycle nutrients from various organic wastes into valuable insect biomass. We found that Citrobacter amalonaticus , a gut commensal bacterium of the insect, exerts beneficial effects on larval growth and development and that the expression of many metabolic larval genes was significantly impacted by the symbiont. To identify the larval genes involved in the host-symbiont interaction, we engineered the symbiont to produce double-strand RNA and enabled the strain to silence host genes in the larval gut environment where the interaction takes place. With this approach, we confirmed that two intestinal protease families are involved in the interaction and provided further evidence that intestinal protein metabolism plays a role in the interaction. This work expands the genetic toolkits available to study the insect functional genomics and host-symbiont interaction and provide the prospective for the future application of gut microbiota on the large-scale bioconversion.
Journal Article
BmPMFBP1 regulates the development of eupyrene sperm in the silkworm, Bombyx mori
by
Yang, Dehong
,
Luo, Xingyu
,
Huang, Yongping
in
Animals
,
Biology and Life Sciences
,
Bombyx - genetics
2022
Sperm deliver the male complement of DNA to the ovum, and thus play a key role in sexual reproduction. Accordingly, spermatogenesis has outstanding significance in fields as disparate as infertility treatments and pest-control, making it a broadly interesting and important focus for molecular genetics research in a wide range of species. Here we investigate spermatogenesis in the model lepidopteran insect Bombyx mori (silkworm moth), with particular focus on the gene PMFBP1 (polyamine modulated factor 1 binding protein 1). In humans and mouse, PMFBP1 is essential for spermatogenesis, and mutations of this gene are associated with acephalic spermatozoa, which cause infertility. We identified a B . mori gene labeled as “PMFBP1” in GenBank’s RefSeq database and sought to assess its role in spermatogenesis. Like in mammals, the silkworm version of this gene ( BmPMFBP1 ) is specifically expressed in testes. We subsequently generated BmPMFBP1 mutants using a transgenic CRISPR/Cas9 system. Mutant males were sterile while the fertility of mutant females was comparable to wildtype females. In B . mori , spermatogenesis yields two types of sperm, the nucleated fertile eupyrene sperm, and anucleated unfertile apyrene sperm. Mutant males produced abnormal eupyrene sperm bundles but normal apyrene sperm bundles. For eupyrene sperm, nuclei were mislocated and disordered inside the bundles. We also found the BmPMFBP1 deficiency blocked the release of eupyrene sperm bundles from testes to ejaculatory seminalis. We found no obvious abnormalities in the production of apyrene sperm in mutant males, and double-matings with apyrene-deficient sex-lethal mutants rescued the ΔBmPMFBP1 infertility phenotype. These results indicate BmPMFBP1 functions only in eupyrene spermatogenesis, and highlight that distinct genes underlie the development of the two sperm morphs commonly found in Lepidoptera. Bioinformatic analyses suggest PMFBP1 may have evolved independently in lepidoptera and mammals, and that despite the shared name, are likely not homologous genes.
Journal Article
Dysfunction of dimorphic sperm impairs male fertility in the silkworm
2020
Sperm, which have a vital role in sexual reproduction in the animal kingdom, can display heteromorphism in some species. The regulation of sperm dichotomy remains a longstanding puzzle even though the phenomenon has been widely documented for over a century. Here we use
Bombyx mori
as a model to study a form of sperm dimorphism (eupyrene and apyrene sperm), which is nearly universal among Lepidoptera. We demonstrate that
B. mori Sex-lethal
(
BmSxl
) is crucial for apyrene sperm development, and that
B. mori poly(A)-specific ribonuclease-like domain-containing 1
(
BmPnldc1
) is required for eupyrene sperm development. BmSXL is distributed in the nuclei and cytoplasm of somatic cyst cells in a mesh-like pattern and in the cytoplasm of germ cells enclosed in spermatocysts and sperm bundles. Cytological analyses of dimorphic sperm in
BmSxl
mutants (∆
BmSxl
) showed deficient apyrene sperm with abnormal nuclei, as well as loss of motility associated with malformed mitochondrial derivatives. We define the crucial function of apyrene sperm in the process of fertilization as assisting the migration of eupyrene spermatozoa from bursa copulatrix to spermatheca. By contrast,
BmPnldc1
deficiency (∆
BmPnldc1
) caused eupyrene sperm abnormalities and impaired the release of eupyrene sperm bundles during spermiation. Although apyrene or eupyrene sperm defects impaired fertility of the mutated males, double copulation of a wild-type female with ∆
BmSxl
and ∆
BmPnldc1
males could rescue the sterility phenotypes induced by single copulation with either gene-deficient male. Our findings demonstrate the crucial functions of
BmSxl
and
BmPnldc1
in the development of sperm dimorphism and the indispensable roles of nonfertile apyrene sperm in fertilization.
Journal Article
Platinum prodrug nanoparticles inhibiting tumor recurrence and metastasis by concurrent chemoradiotherapy
2022
Background
Although concurrent chemoradiotherapy (CRT), as one of the most effective antineoplastic therapies in clinic, can successfully inhibit the growth of tumor cells, a risk of developing secondary tumor is still an insurmountable barrier in clinical practice.
Results
Herein, a new platinum prodrug composed of tannic acid (TA) and Pt
2+
(TA-Pt) complex film was synthesized on the surface of Fe
2
O
3
nanoparticles (NPs) with excellent stability and biocompatibility for enhanced CRT. In this system, TA-Pt complex could respond to the tumor acidic microenvironment and damage the DNA of tumor cells. Moreover, the internal iron core not only improved the effect of subsequent radiotherapy (RT), but also disrupted the iron balance in cells, inducing intracellular ferroptosis and eliminating apoptosis-resistant cells. In vitro and vivo experimental results indicated that more than 90% of tumor cells were depleted and more than 75% of the cured tumor-bearing mice evinced no recurrence or metastasis.
Conclusions
This work offered a new idea for combining the effective chemotherapy, RT and ferroptosis therapy to enhance the curative effect of CRT and inhibit tumor recurrence and metastasis.
Graphical Abstract
Journal Article
Gtsf1 is essential for proper female sex determination and transposon silencing in the silkworm, Bombyx mori
by
Yang, Dehong
,
R. Walter, James
,
Luo, Xingyu
in
Animals
,
Animals, Genetically Modified
,
Biology and Life Sciences
2020
Sex determination pathways are astoundingly diverse in insects. For instance, the silk moth Bombyx mori uniquely use various components of the piRNA pathway to produce the Fem signal for specification of the female fate. In this study, we identified BmGTSF1 as a novel piRNA factor which participates in B . mori sex determination. We found that BmGtsf1 has a distinct expression pattern compared to Drosophila and mouse. CRISPR/Cas9 induced mutation in BmGtsf1 resulted in partial sex reversal in genotypically female animals by shifting expression of the downstream targets BmMasc and Bmdsx to the male pattern. As levels of Fem piRNAs were substantially reduced in female mutants, we concluded that BmGtsf1 plays a critical role in the biogenesis of the feminizing signal. We also demonstrated that BmGTSF1 physically interacted with BmSIWI, a protein previously reported to be involved in female sex determination, indicating BmGTSF1 function as the cofactor of BmSIWI. BmGtsf1 mutation resulted in piRNA pathway dysregulation, including piRNA biogenesis defects and transposon derepression, suggesting BmGtsf1 is also a piRNA factor in the silkworm. Furthermore, we found that BmGtsf1 mutation leads to gametogenesis defects in both male and female. Our data suggested that BmGtsf1 is a new component involved in the sex determination pathway in B . mori .
Journal Article
Preparation and application of an economical and environmentally friendly hydrate inhibitor in gas field development
2024
The prevention and control of natural gas hydrates is an important link in ensuring winter production. Traditional thermodynamic inhibitors, like methanol, are commonly utilized due to their low unit costs and pricing, but they come with considerable safety issues when used on-site due to their high toxicity, flammability, and explosive potential. A cost-effective and eco-friendly hydrate inhibitor was created by combining light polyol amine with other ingredients to solve this problem. At a concentration of 30%, the product has a flash point greater than 80°C and a solidification point of -45°C. With success rates of 99% and 100%, respectively, it was used for winter casing pre-injection anti-freezing operations and balancing tank defoamer anti-freezing operations. Experiments have demonstrated the effectiveness of this inhibitor in preventing the formation of natural gas hydrates. In wintertime on-site anti-freezing activities, the projected cost can be substituted for methanol, as it is essentially equivalent to methanol.
Journal Article