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Transforming food systems is essential to bring about a healthier, equitable, sustainable, and resilient future, including achieving global development and sustainability goals. To date, no comprehensive framework exists to track food systems transformation and their contributions to global goals. In 2021, the Food Systems Countdown to 2030 Initiative (FSCI) articulated an architecture to monitor food systems across five themes: 1 diets, nutrition, and health; 2 environment, natural resources, and production; 3 livelihoods, poverty, and equity; 4 governance; and 5 resilience and sustainability. Each theme comprises three-to-five indicator domains. This paper builds on that architecture, presenting the inclusive, consultative process used to select indicators and an application of the indicator framework using the latest available data, constructing the first global food systems baseline to track transformation. While data are available to cover most themes and domains, critical indicator gaps exist such as off-farm livelihoods, food loss and waste, and governance. Baseline results demonstrate every region or country can claim positive outcomes in some parts of food systems, but none are optimal across all domains, and some indicators are independent of national income. These results underscore the need for dedicated monitoring and transformation agendas specific to food systems. Tracking these indicators to 2030 and beyond will allow for data-driven food systems governance at all scales and increase accountability for urgently needed progress toward achieving global goals.