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result(s) for
"Mehra, Rohit"
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Computational analysis of pathological images enables a better diagnosis of TFE3 Xp11.2 translocation renal cell carcinoma
2020
TFE3 Xp11.2 translocation renal cell carcinoma (TFE3-RCC) generally progresses more aggressively compared with other RCC subtypes, but it is challenging to diagnose TFE3-RCC by traditional visual inspection of pathological images. In this study, we collect hematoxylin and eosin- stained histopathology whole-slide images of 74 TFE3-RCC cases (the largest cohort to date) and 74 clear cell RCC cases (ccRCC, the most common RCC subtype) with matched gender and tumor grade. An automatic computational pipeline is implemented to extract image features. Comparative study identifies 52 image features with significant differences between TFE3-RCC and ccRCC. Machine learning models are built to distinguish TFE3-RCC from ccRCC. Tests of the classification models on an external validation set reveal high accuracy with areas under ROC curve ranging from 0.842 to 0.894. Our results suggest that automatically derived image features can capture subtle morphological differences between TFE3-RCC and ccRCC and contribute to a potential guideline for TFE3-RCC diagnosis.
Translocation renal cell carcinoma is an aggressive form of renal cancer that is often misdiagnosed to other subtypes. Here the authors demonstrated that by using machine learning and H&E stained whole-slide images, an accurate diagnose of this particular type of renal cancer can be achieved.
Journal Article
Quantitative assessment of exposure of heavy metals in groundwater and soil on human health in Reasi district, Jammu and Kashmir
2020
The assessment of heavy metal contents in environmental sectors is important to estimate the carcinogenic and non-carcinogenic doses and risks for the mankind associated with it. The present work deals with the assessment of the risk exposure related to heavy metal contents in groundwater and soil samples to two different age groups via three different transits, i.e., ingestion, inhalation and dermal. The concentrations of heavy metals (Zn, Cd, Cu, Pb and Cr) were measured in the villages of lower Himalayas of Reasi district by using microwave plasma atomic emission spectrometer. The calculated mean contamination factors of heavy metals in soil samples were as: Zn, 0.73; Cu, 0.70; Pb, 0.74; and Cr, 0.33; which led to pollution load index less than unity. The overall carcinogenic risks have been varied from 6.4E−08 to 5.1E−07 in soil samples and from 7.3E−06 to 1.1E−04 in ground water samples and were found to be well within the range prescribed by USEPA (Screening level ecological risk assessment protocol for hazardous waste combustion facilities, appendix E: toxicity reference values, US Environmental Protection Agency, Washington, D.C., 1999). The mean values of heavy metal contents except lead and chromium in water samples were found to be less than the values prescribed by various agencies. Geo-accumulation Index showed that Pb contribute to the highest contamination (0 < Igeo < 1) among the other heavy metals. Cluster analysis and principal component analysis identified that Zn, Cu, Pb and Cr had a relationship and the presence of these heavy metals could be related to vehicle emissions, traffic sources and industrial sources. The overall mean values of the non-carcinogenic doses and associated hazard risks in soil and water samples calculated for children were found to be higher than the adults which may be due to hand to mouth activities.
Journal Article
Radiological risk assessment to the public due to the presence of radon in water of Barnala district, Punjab, India
2021
Various research studies have shown that exposure to radon gas is a cause of concern for health effects to the public. The present work has been carried out for the radiological risk assessment to the public due to the presence of radon isotopes in drinking water of Barnala district of Punjab, India, for the first time using scintillation-based radiation detector. A total of 100 samples were collected from different sources of water (canal and underground water) from 25 villages on grid pattern of 6 × 6 km2 in the study area for uniform mapping. In situ measurements were carried out to find out Rn-222 concentration in water samples. The measured values have been found to vary from 0.17 ± 0.01 to 9.84 ± 0.59 BqL−1 with an average value of 3.37 ± 0.29 BqL−1, which is well below the recommended limit of 100 BqL−1(WHO 2004). The annual effective dose due to ingestion and inhalation of radon has also been calculated for various age groups like infants, children and adults to understand the age-wise dose distribution. The calculated values suggest that there is no significant health risk to the general public from radon in water.
Journal Article
Targeting SWI/SNF ATPases in enhancer-addicted prostate cancer
2022
The switch/sucrose non-fermentable (SWI/SNF) complex has a crucial role in chromatin remodelling
1
and is altered in over 20% of cancers
2
,
3
. Here we developed a proteolysis-targeting chimera (PROTAC) degrader of the SWI/SNF ATPase subunits, SMARCA2 and SMARCA4, called AU-15330. Androgen receptor (AR)
+
forkhead box A1 (FOXA1)
+
prostate cancer cells are exquisitely sensitive to dual SMARCA2 and SMARCA4 degradation relative to normal and other cancer cell lines. SWI/SNF ATPase degradation rapidly compacts
cis
-regulatory elements bound by transcription factors that drive prostate cancer cell proliferation, namely AR, FOXA1, ERG and MYC, which dislodges them from chromatin, disables their core enhancer circuitry, and abolishes the downstream oncogenic gene programs. SWI/SNF ATPase degradation also disrupts super-enhancer and promoter looping interactions that wire supra-physiologic expression of the
AR
,
FOXA1
and
MYC
oncogenes themselves. AU-15330 induces potent inhibition of tumour growth in xenograft models of prostate cancer and synergizes with the AR antagonist enzalutamide, even inducing disease remission in castration-resistant prostate cancer (CRPC) models without toxicity. Thus, impeding SWI/SNF-mediated enhancer accessibility represents a promising therapeutic approach for enhancer-addicted cancers.
PROTAC degrader–induced SWI/SNF inactivation abolishes DNA accessibility at enhancer elements of oncogenes and also tempers supra-physiologic expression of driver transcription factors, resulting in potent inhibition of tumour growth in mouse models.
Journal Article
Quantification of radon contamination in drinking water of Rajasthan, India
2021
The current investigation represents the annual effective dose received due to ingestion and inhalation of radon present in drinking water. As radon itself contributes 3–14% towards the total proportion of lung cancer (WHO in Handbook on indoor radon. A public health perspective, World Health Organization, Geneva, 2009). The samples were taken from Sri Ganganagar region of Rajasthan province in India to calculate radon concentration and thereby to study the health risk. Total 100 water samples were taken from different sources of water which have been classified into two different categories as underground water and surface water sources. In-situ measurements of Rn-222 concentration was carried out using scintillation based radon monitor. The values of Rn-222 concentration were found to lie between 0.13 ± 0.04 and 3.74 ± 0.26 BqL−1 with mean value of 0.92 ± 0.12 BqL−1. These values are far below the maximum contamination level of 100 BqL−1, recommended by WHO, 2004 (Guidelines for drinking-water quality, WHO, Geneva, 2004). The ingestion and inhalation doses have been calculated for infants, children and adults from the derived radon concentration. The calculated doses are below the recommended level of 100 µSvy−1 (World Health Organisation in Guidelines for drinking water quality. Health criteria and other information, WHO Press, Geneva, 2003).
Journal Article
Incidentally detected giant asymptomatic intercostal left lung hernia
2025
A man in his late 70s presented with venostatic symptoms and bilateral varicose veins due to bilateral saphenofemoral junction incompetence. Systemic examination revealed a left inframammary swelling that increased in size on inspiration and decreased on expiration and was linked to an old chest wall trauma. Imaging identified a giant intercostal lung herniation through the fractured ribs, which was managed conservatively three decades ago. As he presently remains asymptomatic for the lung herniation, he decided to continue with the conservative management. The varicose veins were treated with endothermal ablation, allowing him to resume routine activities.
Journal Article
Dose distribution to individual tissues and organs due to exposure of alpha energies from radon and thoron to local population of Hanumangarh, Rajasthan, India
2021
The purpose of the present study is to assess dose received by individual tissues or organs of human beings from the exposure of indoor radon (Rn-222), thoron (Rn-220) and their progeny concentrations using single entry pinhole dosimeters and deposition based progeny sensors (DRPS/DTPS). The deployment of dosimeters were carried out in 75 dwellings across Hanumangarh district of Rajasthan, India. Annual and seasonal activity concentrations were monitored based on which dose distribution to various tissues and organs were assessed. The estimated average annual effective dose of the study area is 0.8 mSvy−1, which is lower than the ICRP recommended limit of 4 mSvy−1 (at work place) and 14 mSvy−1 (for residential buildings) (International Commission on Radiological Protection (ICRP) in Radiological protection against radon exposure, ICRP, Stockholm, 2018). Consequently, indoor radon may pose no health risk to the local population of the studied area.
Journal Article
Radiological risk assessment due to attached/unattached fractions of radon and thoron progeny in Hanumangarh district, Rajasthan
2021
Present study has been carried out for dose estimation from attached/unattached progeny fractions of radon and thoron using wiremesh capped DTPS/DRPS. The measured annual average attached radon/thoron progeny concentration (EERCA and EETCA) in the dwellings has been found to be 5.93 Bqm−3 and 0.43 Bqm−3 respectively. The calculated inhalation dose due to unattached fractions of radon progeny has been found to vary from 0.01 to 40.54 mSvy−1 with mean value of 5.48 mSvy−1 due to mouth breathing and from 0.01 to 9.42 mSvy−1 with mean value of 1.5 mSvy−1 for nasal breathing and the annual effective dose due to radon and thoron progeny has been found to vary from 0.17 to 1.11 mSvy−1and from 0.06 to 0.47 mSvy−1 respectively. These values lie well below the recommended safe range of 4 mSvy−1 at work places and 14 mSvy−1 at residential places (ICRP (International Commission on Radiological Protection) in Radiological protection against radon exposure. ICRP Publication ref 4836-9756-8598. ICRP, Stockholm, 2018). Hence, the indoor air in the study area is safe for breathing and poses no radiological health risk to the residents.
Journal Article