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Ecologists primarily use d 15 N values to estimate the trophic level of organisms, while d 13 C, and even recently d 15 N, are utilized to delineate feeding habitats. However, many factors can influence the stable isotopic composition of consumers, e.g. age, starvation or isotopic signature of primary producers. Such sources of variability make the interpretation of stable isotope data rather complex. To examine these potential sources of variability, muscle tissues of yellowfin tuna (Thunnus albacares) and swordfish (Xiphias gladius) of various body lengths were sampled between 2001 and 2004 in the western Indian Ocean during different seasons and along a latitudinal gradient (23 degrees S to 5 degrees N). Body length and latitude effects on d 15 N and d 13 C were investigated using linear models. Both latitude and body length significantly affect the stable isotope values of the studied species but variations were much more pronounced for d 15 N. We explain the latitudinal effect by differences in nitrogen dynamics existing at the base of the food web and propagating along the food chain up to top predators. This spatial pattern suggests that yellowfin and swordfish populations exhibit a relatively unexpected resident behaviour at the temporal scale of their muscle tissue turnover. The body length effect is significant for both species but this effect is more pronounced in swordfish as a consequence of their different feeding strategies, reflecting specific physiological abilities. Swordfish adults are able to reach very deep water and have access to a larger size range of prey than yellowfin tuna. In contrast, yellowfin juveniles and adults spend most of their time in the surface waters and large yellowfin tuna continue to prey on small organisms. Consequently, nitrogen isotopic signatures of swordfish tissues are higher than those of yellowfin tuna and provide evidence for different trophic levels between these species. Thus, in contrast to d 13 C, d 15 N analyses of tropical Indian Ocean marine predators allow the investigation of complex vertical and spatial segregation, both within and between species, even in the case of highly opportunistic feeding behaviours. The linear models developed in this study allow us to make predictions of d 15 N values and to correct for any body length or latitude differences in future food web studies. [PUBLICATION ABSTRACT]

Mesopelagic fishes are numerically the most important vertebrate group of all world’s oceans. While these species are increasingly threatened by anthropogenic activities, basic biological knowledge is still lacking. For instance, major uncertainties remain on the behaviour, ecology, and thus functional roles of mesopelagic micronektivores, particularly regarding their interactions with physicochemical features. Here, we examine the trophic ecology, habitat, and migratory behaviour of the viperfish ( Chauliodus sloani )—a poorly known and abundant deep-sea species—to further understand the ecology and thus functional role of mesopelagic micronektivores. Moreover, we explore how physical drivers may affect these features and how these relationships are likely to change over large oceanic areas. The viperfish heavily preys on epipelagic migrant species, especially myctophids, and presents spatial and trophic ontogenetic shifts. Temperature restricts its vertical distribution. Therefore, its trophodynamics, migratory behaviour, and functional roles are expected to be modulated by the latitudinal change in temperature. For instance, in most tropical regions the viperfish stay full-time feeding, excreting, and serving as prey (e.g. for bathypelagic predators) at deep layers. On the contrary, in temperate regions, the viperfish ascend to superficial waters where they trophically interact with epipelagic predators and may release carbon where its remineralization is the greatest.

To estimate the original prey size of well-digested prey (fish, cephalopod and crustacean) of large pelagic fish predators representing 17 species in eight families (Scombridae, Xiphiidae, Istiophoridae, Carangidae, Coryphaenidae, Alepisauridae, Sphyraenidae and Carcharhinidae), we presented regression equations relating the length and weight of the prey to lengths of diagnostic hard part structures recovered from stomach contents. Stomach samples were collected in the western Indian Ocean between 2000 and 2008 from predators caught by three fishing gears: longline, purse seine and troll lines. In addition, fresh specimens were collected from trawls nets carried out during scientific cruises at depths ranging from the surface to 500 m. Parameters of the least-square regression equations were estimated between different diagnostic hard parts and the length and the weight of the prey. These relationships are useful for estimating the reconstructed weight of the diet of top predators and for estimating the predator size-prey size ratios. This work is the first reference on such relationships for the forage fauna of the western Indian Ocean.

Wavelet analysis is a powerful tool that is already in use throughout science and engineering. The versatility and attractiveness of the wavelet approach lie in its decomposition properties, principally its time-scale localization. It is especially relevant to the analysis of non-stationary systems, i.e., systems with short-lived transient components, like those observed in ecological systems. Here, we review the basic properties of the wavelet approach for time-series analysis from an ecological perspective. Wavelet decomposition offers several advantages that are discussed in this paper and illustrated by appropriate synthetic and ecological examples. Wavelet analysis is notably free from the assumption of stationarity that makes most methods unsuitable for many ecological time series. Wavelet analysis also permits analysis of the relationships between two signals, and it is especially appropriate for following gradual change in forcing by exogenous variables.

Surface “swarms” of the swimming crabs Charybdis smithii are still considered as an unusual phenomenon in the open Indian Ocean, although their dense pelagic aggregations were already reported in waters off the Indian coast and in the northern Arabian Sea. Based on an extensive large-scale data series taken over 45 years, we demonstrate that C. smithii is common in the pelagic provinces of the western Indian Ocean driven by the wind monsoon regime. Swimming crabs are dispersed by the monsoon currents throughout the equatorial Indian Ocean. They aggregate at night in the upper 150-m layer, where their estimated biomass derived from pelagic trawling data can exceed 130 kg km⁻². Abundance of C. smithii can reach >15,000 ind. km⁻² in July (i.e. the peak of the south-west monsoon), declines by 50-fold in March and is negligible in May. C. smithii is an important prey for more than 30 species of abundant epipelagic top predators. In turn, it feeds on mesopelagic species. This swimming crab is a major species of the intermediate trophic levels and represents a crucial seasonal trophic link in the open ocean ecosystem of the western Indian Ocean. Outbursts in pelagic waters of huge biomasses of ordinarily benthic crustaceans (C. smithii and Natosquilla investigatoris) are a remarkable feature of the Indian Ocean, although similar, but smaller, events are reported in the Pacific and Atlantic Oceans.

Secondary use of health data has reached unequaled potential to improve health systems governance, knowledge, and clinical care. Transparency regarding this secondary use is frequently cited as necessary to address deficits in trust and conditional support and to increase patient awareness. We aimed to review the current published literature to identify different stakeholders' perspectives and recommendations on what information patients and members of the public want to learn about the secondary use of health data for research purposes and how and in which situations. Using PRISMA-ScR (Preferred Reporting Items for Systematic Reviews and Meta-Analyses extension for Scoping Reviews) guidelines, we conducted a scoping review using Medline, CINAHL, PsycINFO, Scopus, Cochrane Library, and PubMed databases to locate a broad range of studies published in English or French until November 2022. We included articles reporting a stakeholder's perspective or recommendations of what information patients and members of the public want to learn about the secondary use of health data for research purposes and how or in which situations. Data were collected and analyzed with an iterative thematic approach using NVivo. Overall, 178 articles were included in this scoping review. The type of information can be divided into generic and specific content. Generic content includes information on governance and regulatory frameworks, technical aspects, and scientific aims. Specific content includes updates on the use of one's data, return of results from individual tests, information on global results, information on data sharing, and how to access one's data. Recommendations on how to communicate the information focused on frequency, use of various supports, formats, and wording. Methods for communication generally favored broad approaches such as nationwide publicity campaigns, mainstream and social media for generic content, and mixed approaches for specific content including websites, patient portals, and face-to-face encounters. Content should be tailored to the individual as much as possible with regard to length, avoidance of technical terms, cultural competence, and level of detail. Finally, the review outlined 4 major situations where communication was deemed necessary: before a new use of data, when new test results became available, when global research results were released, and in the advent of a breach in confidentiality. This review highlights how different types of information and approaches to communication efforts may serve as the basis for achieving greater transparency. Governing bodies could use the results: to elaborate or evaluate strategies to educate on the potential benefits; to provide some knowledge and control over data use as a form of reciprocity; and as a condition to engage citizens and build and maintain trust. Future work is needed to assess which strategies achieve the greatest outreach while striking a balance between meeting information needs and use of resources.

Aim: We examined potential environmental drivers of broad-scale spatial patterns in the trophic structure of marine ecosystems as represented by nitroge-n stable isotopes in globally distributed marine predators. Additionally, we assessed the effects of spatial scale on the predictive capabilities of environmental variables. Location: Global oceans. Time period: 2000 to 2015. Major taxa studied: Tunas: Thunnus albacares, Thunnus obesus, Thunnus alalunga. Methods: We undertook a global compilation and meta-analysis of the bulk nitrogen stable isotope ratios (δ15N values) of three tuna species (n = 4,281). After adjusting for regional variations in baseline δ15N values using a global ocean biogeochemistry model, generalized additive mixed models were employed to infer global-scale oceanographic controls of trophic structure, using cosmopolitan tuna species as a model. Results: For the three tuna species, variation in trophic position estimated using bulk δ15N values was largely explained by geographical location and the corresponding oxygen minimum layer depth. Tuna trophic positions declined in areas with reduced oxygen at depth. Food-chain length, as captured by maximum trophic position, was longer in areas of the western Pacific Ocean and shorter in the northern Atlantic and eastern Pacific Oceans. Trophic adaptability of the tuna predators, as indicated by intraspecific variability, was highest in the western and central Pacific Ocean and lowest in the northern Atlantic Ocean. Our analysis demonstrated that while tunas share similar functional trophic roles, deeper-foraging tuna species had higher trophic positions globally. The predictive capacity of environmental variables decreased at finer (regional) spatial scales. Main conclusions: Our work suggests that habitat compression resulting from the predicted global expansion of oxygen minimum zones with ocean warming will impact the trophic structure of marine food webs and the corresponding foraging habits of marine predators. Spatial scale analyses highlighted the importance of representing differences in regional ecological dynamics in global-scale trophic and ecosystem models.

The tropical Atlantic has been facing a massive proliferation of Sargassum since 2011, with severe environmental and socioeconomic impacts. The development of large-scale modeling of Sargassum transport and physiology is essential to clarify the link between Sargassum distribution and environmental conditions, and to lay the groundwork for a seasonal forecast at the scale of the tropical Atlantic basin. We developed a modeling framework based on the Nucleus for European Modelling of the Ocean (NEMO) ocean model, which integrates transport by currents and waves, and physiology of Sargassum with varying internal nutrients quota, and considers stranding at the coast. The model is initialized from basin-scale satellite observations, and performance was assessed over the year 2017. Model parameters are calibrated through the analysis of a large ensemble of simulations, and the sensitivity to forcing fields like riverine nutrient inputs, atmospheric deposition, and waves is discussed. Overall, results demonstrate the ability of the model to reproduce and forecast the seasonal cycle and large-scale distribution ofSargassum biomass.

The Tropical Atlantic is facing a massive proliferation of Sargassum since 2011, with severe environmental and socioeconomic impacts. As a contribution to this proliferation, an increase in nutrient inputs from the tropical rivers, in response to climate and land use changes or increasing urbanization, has been often suggested and widely reported in the scientific and public literature. Here we discuss whether changes in river nutrient inputs could contribute to Sargassum proliferation in the recent years or drive its seasonal cycle. Using long-term in situ and satellite measurements of discharge, dissolved and particulate nutrients of the three world largest rivers (Amazon, Orinoco, Congo), we do not find clear evidences that nutrient fluxes may have massively increased over the last 15 years. Moreover, focusing on year 2017, we estimate that along the year only 10% of the Sargassum biomass occurred in regions under river plume influence. While deforestation and pollution are a reality of great concern, our results corroborate recent findings that hydrological changes are not the first order drivers of Sargassum proliferation. Besides, satellite observations suggest that the major Atlantic river plumes suffered a decrease of phytoplankton biomass in the last two decades. Reconciling these observations requires a better understanding of the nutrient sources that sustain Sargassum and phytoplankton growth in the region.

Ecological guilds have been widely applied for understanding the structure and functioning of aquatic ecosystems. This study describes the composition and the spatio-temporal changes in the structure of the fish fauna and the movements between the estuary and the coast of a tropical estuary, the Itapissuma/Itamaracá Complex (IIC) in northeastern Brazil. Fish specimens were collected during the dry and rainy seasons in 2013 and 2014. A total of 141 species of 34 families were recorded. Almost half of the species (66 species, 47%) were exclusive to the estuary and 50 species (35%) to the coast; 25 (18%) were common to both environments. Marine species were dominant in both richness and biomass as they explore the environment during part of their life cycle, whereas estuarine species were dominant in abundance. Marine stragglers displayed a higher richness, abundance and biomass in the coastal waters. The estuarine environment was dominated by zoobenthivores in terms of richness, while detritivores prevailed in abundance and biomass. Zoobenthivores had the highest richness and abundance in coastal waters, while piscivores had the highest biomass. The IIC supports a rich fauna with a diverse trophic structure and is an important feeding and development area for migratory species.