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"Minarik, T."
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Dynamic regulation of interregional cortical communication by slow brain oscillations during working memory
2019
Transiently storing information and mentally manipulating it is known as working memory. These operations are implemented by a distributed, fronto-parietal cognitive control network in the brain. The neural mechanisms controlling interactions within this network are yet to be determined. Here, we show that during a working memory task the brain uses an oscillatory mechanism for regulating access to prefrontal cognitive resources, dynamically controlling interactions between prefrontal cortex and remote neocortical areas. Combining EEG with non-invasive brain stimulation we show that fast rhythmical brain activity at posterior sites are nested into prefrontal slow brain waves. Depending on cognitive demand this high frequency activity is nested into different phases of the slow wave enabling dynamic coupling or de-coupling of the fronto-parietal control network adjusted to cognitive effort. This mechanism constitutes a basic principle of coordinating higher cognitive functions in the human brain.
Working memory involves a fronto-parietal brain network, but how the parts of this network are coordinated is unclear. Here, the authors show that fast brain activity at posterior sites is nested into prefrontal slow brain waves, with cognitive demand determining the slow wave phase involved.
Journal Article
A multicenter phase II study of the cryptophycin analog LY355703 in patients with platinum-resistant ovarian cancer
2006
LY355703 is a synthetic product structurally related to the cryptophycin family isolated from the blue-green algae, which exerts a potent destabilization of microtubules during mitosis. This study was performed to determine the activity of LY355703 in patients with platinum-resistant advanced ovarian cancer and to characterize its toxicity profile. Twenty-six patients were enrolled in this study. Resistant disease was defined as a platinum-free interval of <6 months from primary treatment or rechallenge. LY355703 (1.5 mg/m2) was administered intravenously on days 1 and 8, every 3 weeks, infused over 2 h. From 24 patients evaluable for response, three partial responses (12.5%) and seven disease stabilizations were registered (29.2%), for an overall clinical benefit of 41.7%. Fourteen patients (58.3%) experienced a progression of the disease during treatment. Among the 25 patients evaluable for toxicity, two episodes of grade 3 anemia (8%); one, grade 3 thrombocytopenia (4%); one, grade 4 elevation of creatinine (4%); and one, grade 3 hyperbilirubinemia (4%) were reported. LY355703 has a modest activity in patients with platinum-resistant advanced ovarian cancer. Nevertheless, the considerable rate of disease stabilization in the absence of serious adverse events in this poor-prognosis study population suggests that this novel cryptophycin may deserve further investigation in this setting.
Journal Article
Contaminants of emerging concern in tributaries to the Laurentian Great Lakes: I. Patterns of occurrence
by
Elliott, Sarah M.
,
Lee, Kathy E.
,
Gefell, Daniel J.
in
Agrochemicals
,
Analysis
,
Aromatic hydrocarbons
2017
Human activities introduce a variety of chemicals to the Laurentian Great Lakes including pesticides, pharmaceuticals, flame retardants, plasticizers, and solvents (collectively referred to as contaminants of emerging concern or CECs) potentially threatening the vitality of these valuable ecosystems. We conducted a basin-wide study to identify the presence of CECs and other chemicals of interest in 12 U.S. tributaries to the Laurentian Great Lakes during 2013 and 2014. A total of 292 surface-water and 80 sediment samples were collected and analyzed for approximately 200 chemicals. A total of 32 and 28 chemicals were detected in at least 30% of water and sediment samples, respectively. Concentrations ranged from 0.0284 (indole) to 72.2 (cholesterol) μg/L in water and 1.75 (diphenhydramine) to 20,800 μg/kg (fluoranthene) in sediment. Cluster analyses revealed chemicals that frequently co-occurred such as pharmaceuticals and flame retardants at sites receiving similar inputs such as wastewater treatment plant effluent. Comparison of environmental concentrations to water and sediment-quality benchmarks revealed that polycyclic aromatic hydrocarbon concentrations often exceeded benchmarks in both water and sediment. Additionally, bis(2-ethylhexyl) phthalate and dichlorvos concentrations exceeded water-quality benchmarks in several rivers. Results from this study can be used to understand organism exposure, prioritize river basins for future management efforts, and guide detailed assessments of factors influencing transport and fate of CECs in the Great Lakes Basin.
Journal Article
Real‐Time Water Levels Using GNSS‐IR: A Potential Tool for Flood Monitoring
2024
Global Navigation Satellite System Interferometric Reflectometry (GNSS‐IR) using low‐cost antennas is a practical solution for monitoring water levels from rivers, lakes and seas that does not require submerging any instruments in water. Here we present a novel method for obtaining real‐time water levels using multiple low‐cost antennas that we validate by comparing with measurements from a co‐located pressure gauge at two sites with variable tides. Additionally, we use survey measurements to show that there is a site‐dependant mean bias in GNSS‐IR measurements up to a few centimeters, but this mean bias can be effectively removed by using a correction for the effect of tropospheric delay. We conclude that GNSS‐IR water level sensors could be a powerful tool for real‐time applications such as flood or storm surge monitoring and water resource management, as well as for improving the spatial coverage of sensors in remote regions. Plain Language Summary A fundamental component of monitoring water bodies such as rivers, lakes or seas is to measure how the height of the water surface changes over time. These measurements are used in flood forecasting, water resource management and for predicting tides. The most commonly used instruments for making such measurements are pressure sensors that need to be submerged in water. Such sensors can be easily dislodged during flooding conditions by debris or ice and can be dangerous to install, for example, during ice cover or wavy conditions. This article focuses on a technique that repurposes mass‐market navigation instrumentation for monitoring water levels. The technique is advantageous because sensors do not need to be submerged in water, instead they can be placed up to tens of meters away from the water surface. Practical implementation of the technique for aforementioned applications such as flood monitoring requires real‐time data processing. Here we present an efficient algorithm to obtain water levels in real‐time and validate the algorithm using data from two sites. Key Points We present a new technique for obtaining water levels in real‐time using multiple compact Global Navigation Satellite System antennas The technique is verified by comparing with pressure gauges at two sites and using surveying techniques We discuss potential opportunities for applications such as flood monitoring
Journal Article
Reconstructing Religious Attendance in European Communist Countries
2021
Background
The research on religion under communism suffers from a lack of quantitative data on religious attendance to complement the existing information about government policies and anecdotal data about the operation of religious organizations under communism. The available data are scarce and often unreliable.
Purpose
This paper presents a method for reconstructing data on past religious attendance and presents a dataset that contains an estimate of religious attendance rates in seven European communist countries covering the period between the 1930s and the 1990s. Such data are needed to corroborate and complement the sources currently available.
Methods
The reconstruction is based on retrospective questions in surveys conducted in the post-communist period, particularly the ISSP. The paper also verifies the internal consistency of the reconstructed attendance rates using different characteristics of survey respondents to predict their reported attendance. Further, it verifies external consistency against post-communist surveys (ISSP, EVS) and the data available from the communist period.
Results
The dataset support existing literature and provide some new information about religiosity under communist rule. The reconstructed attendance rates appear internally consistent, and the responses regarding past religious attendance do not seem to be driven primarily by the respondents’ present characteristics. The estimated past attendance rates are also consistent with other sources.
Conclusions and Implications
The dataset provides additional data that allow an evaluation of the level and change of religious attendance, the effectiveness of communist anti-religious campaigns and secularization trends in the communist countries. Such data were not available before that were estimated in a consistent way across different countries and time periods. The method can also be used in other settings.
Journal Article
Optimal parameters for rapid (invisible) frequency tagging using MEG
by
Jensen, Ole
,
Berger, Barbara
,
Minarik, Tamas
in
Alzheimer's disease
,
Brain
,
Cognitive ability
2023
•This extensive investigation of Rapid Frequency Tagging offers clear suggestions for optimal parameters in order to reliably elicit steady state visual evoked potentials/fields (SSVEP/Fs) that can be recorded using M/EEG while being largely invisible.•We (imperceptibly) flickered patches at various locations on a screen in distinct fast frequencies (>60 Hz) and patch sizes of 1 visual degree and larger which can be combined with any visual information on the screen.•Rapid frequency tagging using these optimal parameters allows for examining a range of cognitive phenomena including spatial attention allocation and potentially clinical use or brain computer interfacing.
Frequency tagging has been demonstrated to be a useful tool for identifying representational-specific neuronal activity in the auditory and visual domains. However, the slow flicker (<30 Hz) applied in conventional frequency tagging studies is highly visible and might entrain endogenous neuronal oscillations. Hence, stimulation at faster frequencies that is much less visible and does not interfere with endogenous brain oscillatory activity is a promising new tool. In this study, we set out to examine the optimal stimulation parameters of rapid frequency tagging (RFT/RIFT) with magnetoencephalography (MEG) by quantifying the effects of stimulation frequency, size and position of the flickering patch. Rapid frequency tagging using flickers above 50 Hz results in almost invisible stimulation which does not interfere with slower endogenous oscillations; however, the signal is weaker as compared to tagging at slower frequencies so certainty over the optimal parameters of stimulation delivery are crucial. The here presented results examining the frequency range between 60 Hz and 96 Hz suggest that RFT induces brain responses with decreasing strength up to about 84 Hz. In addition, even at the smallest flicker patch (2°) focally presented RFT induces a significant and measurable oscillatory brain signal (steady state visual evoked potential/field, SSVEP/F) at the stimulation frequency (66 Hz); however, the elicited response increases with patch size. While focal RFT presentation elicits the strongest response, off-centre presentations do generally mainly elicit a measureable response if presented below the horizontal midline. Importantly, the results also revealed considerable individual differences in the neuronal responses to RFT stimulation. Finally, we discuss the comparison of oscillatory measures (coherence and power) and sensor types (planar gradiometers and magnetometers) in order to achieve optimal outcomes. Based on our extensive findings we set forward concrete recommendations for using rapid frequency tagging in human cognitive neuroscience investigations.
[Display omitted]
Journal Article
Isatuximab plus pomalidomide and low-dose dexamethasone versus pomalidomide and low-dose dexamethasone in patients with relapsed and refractory multiple myeloma (ICARIA-MM): follow-up analysis of a randomised, phase 3 study
2022
The primary analysis of the ICARIA-MM study showed significant improvement in progression-free survival with addition of isatuximab to pomalidomide–dexamethasone in relapsed and refractory multiple myeloma. Here, we report a prespecified updated overall survival analysis at 24 months after the primary analysis.
In this randomised, multicentre, open-label, phase 3 study adult patients (aged ≥18 years) with relapsed and refractory multiple myeloma who had received at least two previous lines of therapy, including lenalidomide and a proteasome inhibitor, and had an Eastern Cooperative Oncology Group performance status of 0–2 were recruited from 102 hospitals in 24 countries across Europe, North America, and the Asia-Pacific regions. Patients were excluded if they had anti-CD38 refractory disease or previously received pomalidomide. Patients were randomly assigned (1:1), using an interactive response technology with permuted blocked randomisation (block size of four) and stratified by number of previous treatment lines (2–3 vs >3) and aged (<75 vs ≥75 years), to isatuximab–pomalidomide–dexamethasone (isatuximab group) or pomalidomide–dexamethasone (control group). In the isatuximab group, intravenous isatuximab 10 mg/kg was administered on days 1, 8, 15, and 22 of the first 4-week cycle, and then on days 1 and 15 of subsequent cycles. Both groups received oral pomalidomide 4 mg on days 1–21 of each cycle, and weekly oral or intravenous dexamethasone 40 mg (20 mg if aged ≥75 years) on days 1, 8, 15, and 22 of each cycle. Treatment was continued until disease progression, unacceptable toxicity, or withdrawal of consent. Here' we report a prespecified second interim analysis of overall survival (time from randomisation to any-cause death), a key secondary endpoint, in the intention-to-treat population (ie, all patients who provided informed consent and allocated a randomisation number) at 24 months after the primary analysis. Safety was assessed in all patients who received at least one dose or part dose of study treatment. The prespecified stopping boundary for the overall survival analysis was when the derived p value was equal to or less than 0·0181. This study is registered with ClinicalTrials.gov, NCT02990338, and is active, but not recruiting.
Between Jan 10, 2017, and Feb 2, 2018, 387 patients were screened and 307 randomly assigned to either the isatuximab (n=154) or control group (n=153). Median follow-up at data cutoff (Oct 1, 2020) was 35·3 months (IQR 33·5–37·4). Median overall survival was 24·6 months (95% CI 20·3–31·3) in the isatuximab group and 17·7 months (14·4–26·2) in the control group (hazard ratio 0·76 [95% CI 0·57–1·01]; one-sided log-rank p=0·028, not crossing prespecified stopping boundary). The most common grade 3 or worse treatment-emergent adverse events in the isatuximab group versus the control group were neutropenia (76 [50%] of 152 patients vs 52 [35%] of 149 patients), pneumonia (35 [23%] vs 31 [21%]), and thrombocytopenia (20 [13%] vs 18 [12%]). Serious treatment-emergent adverse events were observed in 111 (73%) patients in the isatuximab group and 90 (60%) patients in the control group. Two (1%) treatment-related deaths occurred in the isatuximab group (one due to sepsis and one due to cerebellar infarction) and two (1%) occurred in the control group (one due to pneumonia and one due to urinary tract infection).
Addition of isatuximab plus pomalidomide–dexamethasone resulted in a 6·9-month difference in median overall survival compared with pomalidomide–dexamethasone and is a new standard of care for lenalidomide-refractory and proteasome inhibitor-refractory or relapsed multiple myeloma. Final overall survival analysis follow-up is ongoing.
Sanofi.
Journal Article
From the Communists and Post-Communists Alike: State-Paid Salaries of the Clergy in the Czech Lands 1949–2012
2022
The article examines the development of state-paid salaries for the clergy introduced by the Communists in Czechoslovakia from their institution in 1949 until they were removed in a major change of church-state relations in 2012. In the initial years of Communist rule, it appears that the salaries were part of a “carrot and stick” strategy aiming to subject churches to the state. Later, the real value of salaries steadily decreased, leaving priests marginalized in the economic structure. Following the collapse of the Communist regime, the salaries of the clergy were significantly increased; although, in subsequent years, they followed a trend similar to the pre-1989 period. The similarity in the development of salaries in the Communist and post-Communist period and the reluctance to restitute the church property after 1989 reflects the attitudes of the Czech population and the political representation toward organized religion and the transition from assertive to passive secularism.
Journal Article
Evaluation of 16S rRNA primer sets for characterisation of microbiota in paediatric patients with autism spectrum disorder
by
Mikula, I.
,
Palkova, L.
,
Ostatnikova, D.
in
631/326/2565/2134
,
692/308/3187
,
692/699/375/366/1373
2021
intestinal microbiota is becoming a significant marker that reflects differences between health and disease status also in terms of gut-brain axis communication. Studies show that children with autism spectrum disorder (ASD) often have a mix of gut microbes that is distinct from the neurotypical children. Various assays are being used for microbiota investigation and were considered to be universal. However, newer studies showed that protocol for preparing DNA sequencing libraries is a key factor influencing results of microbiota investigation. The choice of DNA amplification primers seems to be the crucial for the outcome of analysis. In our study, we have tested 3 primer sets to investigate differences in outcome of sequencing analysis of microbiota in children with ASD. We found out that primers detected different portion of bacteria in samples especially at phylum level; significantly higher abundance of Bacteroides and lower Firmicutes were detected using 515f/806r compared to 27f/1492r and 27f*/1495f primers. So, the question is whether a gold standard of Firmicutes/Bacteroidetes ratio is a valuable and reliable universal marker, since two primer sets towards 16S rRNA can provide opposite information. Moreover, significantly higher relative abundance of Proteobacteria was detected using 27f/1492r. The beta diversity of sample groups differed remarkably and so the number of observed bacterial genera.
Journal Article
Synthesis of 2D layered transition metal (Ni, Co) hydroxides via edge-on condensation
2024
Layered transition metal hydroxides (LTMHs) with transition metal centers sandwiched between layers of coordinating hydroxide anions have attracted considerable interest for their potential in developing clean energy sources and storage technologies. However, two-dimensional (2D) LTMHs remain largely understudied in terms of physical properties and applications in electronic devices. Here, for the first time we report > 20 μm α-Ni(OH)
2
2D crystals, synthesized from hydrothermal reaction. And an edge-on condensation mechanism assisted with the crystal field geometry is proposed to understand the 2D intra-planar growth of the crystals, which is also testified through series of systematic comparative studies. We also report the successful synthesis of 2D Co(OH)
2
crystals (> 40 μm) with more irregular shape due to the slightly distorted octahedral geometry of the crystal field. Moreover, the detailed structural characterization of synthesized α-Ni(OH)
2
are performed. The optical band gap energy is extrapolated as 2.54 eV from optical absorption measurements and the electronic bandgap is measured as 2.52 eV from reflected electrons energy loss spectroscopy (REELS). We further demonstrate its potential as a wide bandgap (WBG) semiconductor for high voltage operation in 2D electronics with a high breakdown strength, 4.77 MV/cm with 4.9 nm thickness. The successful realization of the 2D LTMHs opens the door for future exploration of more fundamental physical properties and device applications.
Journal Article