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506 result(s) for "Morrison, Rebecca"
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Data-Driven Corrections of Partial Lotka–Volterra Models
In many applications of interacting systems, we are only interested in the dynamic behavior of a subset of all possible active species. For example, this is true in combustion models (many transient chemical species are not of interest in a given reaction) and in epidemiological models (only certain subpopulations are consequential). Thus, it is common to use greatly reduced or partial models in which only the interactions among the species of interest are known. In this work, we explore the use of an embedded, sparse, and data-driven discrepancy operator to augment these partial interaction models. Preliminary results show that the model error caused by severe reductions—e.g., elimination of hundreds of terms—can be captured with sparse operators, built with only a small fraction of that number. The operator is embedded within the differential equations of the model, which allows the action of the operator to be interpretable. Moreover, it is constrained by available physical information and calibrated over many scenarios. These qualities of the discrepancy model—interpretability, physical consistency, and robustness to different scenarios—are intended to support reliable predictions under extrapolative conditions.
The welfare and productivity of sows and piglets in group lactation from 7, 10, or 14 d postpartum
Abstract Transferring sows and their litters to group lactation (GL) after an initial period of farrowing crate (FC) housing could enhance the viability of GL for commercial production. Group lactation from 7 d postpartum would reduce the time sows spend in confinement, but the effects of early mixing on animal welfare and productivity require examination. Two experiments were conducted on sows and piglets kept in GL from 7, 10, or 14 d postpartum, compared with FC. Experiment 1 utilized 180 sows and 1,887 piglets over five time replicates (n = 60 sow and litter units per treatment) comparing GL from 7 or 14 d postpartum to FC. In experiment 2, 108 sows and 1,179 piglets were studied over three time replicates (n = 36 sow and litter units per treatment) comparing GL from 10 or 14 d postpartum to FC. All sows farrowed in FC. Group lactation sows were transferred to pens (one pen of five sows at 8.4 m2/sow and one pen of seven sows at 8.1 m2/sow, per GL treatment and replicate) with their litters at 7 (GL7), 10 (GL10), or 14 (GL14) d postpartum. Farrowing crate sows and their litters remained in their FC. Data were collected on sow feed intake and reproduction, piglet mortality (from day 6 postpartum), and sow and piglet weight changes, plasma cortisol concentrations, and injuries. Piglet mortality was greater in the GL7 (17 ± 1.8%) and GL10 treatments (12 ± 0.9%) compared with GL14 (8.3 ± 1.8% P ≤ 0.001 and 8.1 ± 0.9% P ≤ 0.001 in experiments 1 and 2), and greater in GL overall compared with FC (2.7 ± 1.5% and 1.8 ± 0.9% in FC in experiments 1 and 2; P ≤ 0.001). Piglets from GL7 were also lighter at weaning than GL14 piglets (P < 0.001), whereas GL10 and GL14 did not differ (P > 0.05). Overall, piglets in GL were lighter at weaning than piglets in FC (P ≤ 0.01). Sows from GL7 were heavier at weaning (P = 0.001), and GL10 sows tended to be heavier at weaning (P = 0.08), than GL14 and FC sows. Post-mixing, sow cortisol (P ≤ 0.01) and sow and piglet injuries (P ≤ 0.02) were greater in GL than FC. Treatment had no effect on sow feed intake or reproductive performance (P > 0.05). Under the conditions of this research, the known benefits of two-stage GL housing were achieved at a cost particularly to piglets in terms of increased piglet mortality and injuries after mixing, and reduced piglet growth. The risk of piglet mortality decreased with older age at mixing.
Piglet Viability: A Review of Identification and Pre-Weaning Management Strategies
Increased attention on the effects of the global push for a larger litter size has focused on the increased occurrence of piglets with decreased viability, which have lighter birthweights and a reduced ability to thrive in early life. To improve their odds of survival, interventions must be timely and targeted. This requires the early identification of low-viability pigs and appropriate strategies to manage them. Using novel measures such as abdominal circumference and crown to the rump length in conjunction with birth weight may provide an improved protocol for the identification of those at most risk of preweaning mortality. Further, identifying these at-risk piglets allows interventions to increase their colostrum intake and heat provisions shortly following birth. The appropriate management of the pre- and post-partum sows will improve the chances of decreasing the number of piglets born with lower viability. However, this outcome is constrained by limitations in resources such as technology and staffing. If these challenges can be overcome, it will allow for greater control and increased effectiveness in the implementation of current and new management strategies.
Exact Reduction of the Generalized Lotka–Volterra Equations via Integral and Algebraic Substitutions
Systems of interacting species, such as biological environments or chemical reactions, are often described mathematically by sets of coupled ordinary differential equations. While a large number β of species may be involved in the coupled dynamics, often only α<β species are of interest or of consequence. In this paper, we explored how to construct models that include only those given α species, but still recreate the dynamics of the original β-species model. Under some conditions detailed here, this reduction can be completed exactly, such that the information in the reduced model is exactly the same as the original one, but over fewer equations. Moreover, this reduction process suggests a promising type of approximate model—no longer exact, but computationally quite simple.
A Systematic Review of the Relationship Between Rumination and Suicidality
Rumination has been persistently implicated in the etiology of hopelessness and depression, which are proximal predictors of suicidality. As a result, researchers have started to examine the role of rumination in suicidality. This systematic review provides a concise synopsis of the current progress in examining the relationship between rumination and suicidality, and highlights areas for future research. A search of the international literature was conducted using the three main psychological and medical databases. Eleven studies were identified providing evidence, with one exception, of a relationship between rumination and suicidality. This review also highlights the considerable dearth of studies on this area of concern, specifically of case‐control and prospective, clinical studies, in the worldwide literature.
IL-1β turnover by the UBE2L3 ubiquitin conjugating enzyme and HECT E3 ligases limits inflammation
The cytokine interleukin-1β (IL-1β) has pivotal roles in antimicrobial immunity, but also incites inflammatory disease. Bioactive IL-1β is released following proteolytic maturation of the pro-IL-1β precursor by caspase-1. UBE2L3, a ubiquitin conjugating enzyme, promotes pro-IL-1β ubiquitylation and proteasomal disposal. However, actions of UBE2L3 in vivo and its ubiquitin ligase partners in this process are unknown. Here we report that deletion of Ube2l3 in mice reduces pro-IL-1β turnover in macrophages, leading to excessive mature IL-1β production, neutrophilic inflammation and disease following inflammasome activation. An unbiased RNAi screen identified TRIP12 and AREL1 E3 ligases of the Homologous to E6 C-terminus (HECT) family in adding destabilising K27-, K29- and K33- poly-ubiquitin chains on pro-IL-1β. We show that precursor abundance determines mature IL-1β production, and UBE2L3, TRIP12 and AREL1 limit inflammation by shrinking the cellular pool of pro-IL-1β. Our study uncovers fundamental processes governing IL-1β homeostasis and provides molecular insights that could be exploited to mitigate its adverse actions in disease. The turnover of interleukin-1β, a cytokine that plays important roles in both physiologic and pathologic inflammatory processes, is regulated by proteolytic maturation of the pro-form and by ubiquitin-mediated degradation. Here authors identify the specific ubiquitin E3 ligases that form an active complex with UBE2L3, a ubiquitin conjugating enzyme, that target pro-IL-1β for proteasomal breakdown.
Tail Docking of Piglets 1: Stress Response of Piglets to Tail Docking
This experiment compared the stress responses of piglets to tail docking. Two hundred and eighty-eight piglets were allocated to the following treatments at 2 d post-farrowing: (1) sham handling treatment; (2) surgical castration; (3) tail docking using clippers; (4) tail docking using a cauterising iron. Blood samples were collected at 15 min, 30 min and 24 h post-treatment and analysed for total plasma cortisol. Behaviours indicative of pain, such as escape attempts, vocalisations and standing with head lowered were measured. Cortisol concentrations at 15 min post-treatment were higher (p < 0.001) in the tail docking and castration treatment groups than the sham handling treatment group, but at 30 min post-treatment, only the clipper and castration treatment groups had higher (p < 0.001) cortisol concentrations than the sham handling treatment. Duration of vocalisations and escape attempts were greater (p < 0.0001) during the castration treatment than the sham and tail docking treatments, but these behaviours occurred less (p < 0.05) in tail-docked piglets than those that were castrated. Piglets undergoing the tail-docked treatments and the castration treatment exhibited more behaviours indicative of pain, such as standing longer (p < 0.05) with the head lowered in the 60 min after treatment, than those in the sham handling treatment group. There were no treatment effects on cortisol concentrations and behaviour at 23–24 h post-treatment. The physiological results at 30 min post-treatment indicate that tail docking with cauterisation may be less aversive than tail docking with clippers.
Patients experiences with multiple sclerosis disease-modifying therapies in daily life – a qualitative interview study
Background Besides coping with a disease with many uncertainties, people with relapsing-remitting multiple sclerosis face complex decisions concerning disease-modifying therapies (DMTs). In an interview study, we aimed to assess patients’ experiences with DMTs. Methods Problem-centred interviews were conducted with 50 people with relapsing-remitting multiple sclerosis in Germany using maximum variation sampling and covering all licensed DMTs. Data were analysed thematically using deductive and inductive categories. Results 47 of 50 patients had treatment with at least one of the approved DMTs. The main themes were: (1) starting a DMT, (2) switching to another DMT, (3) discontinuing a DMT, and (4) multiple sclerosis without starting a DMT. Different intercorrelated factors influenced the decision-making processes for or against a DMT. Individual experiences with DMTs in daily life contained the effort in administration, success, and failure of DMTs, coping strategies and well-being without DMTs. The decision-making process for or against a DMT and the use of those treatments can be understood as a constant, continually shifting process, complicated by different factors, which change over time. Experiences with DMTs were characterized by attempts to handle uncertainty and to (re)gain control and integrate adaptivity into one’s life. Conclusions The study provides a rich and nuanced amount of patients’ experiences with DMTs. The findings demonstrate the importance for practitioners to look at current life circumstances of patients with multiple sclerosis when recommending a DMT and to promote and enable patients to make informed decisions.
Remotely Sensed Imagery for Early Detection of Respiratory Disease in Pigs: A Pilot Study
Respiratory diseases are a major problem in the pig industry worldwide. Due to the impact of these diseases, the early identification of infected herds is essential. Computer vision technology, using RGB (red, green and blue) and thermal infrared imagery, can assist the early detection of changes in animal physiology related to these and other diseases. This pilot study aimed to identify whether these techniques are a useful tool to detect early changes of eye and ear-base temperature, heart rate and respiration rate in pigs that were challenged with Actinobacillus pleuropneumoniae. Clinical observations and imagery were analysed, comparing data obtained from animals that showed some signs of illness with data from animals that showed no signs of ill health. Highly significant differences (p < 0.05) were observed between sick and healthy pigs in heart rate, eye and ear temperature, with higher heart rate and higher temperatures in sick pigs. The largest change in temperature and heart rate remotely measured was observed around 4–6 h before signs of clinical illness were observed by the skilled technicians. These data suggest that computer vision techniques could be a useful tool to detect indicators of disease before the symptoms can be observed by stock people, assisting the early detection and control of respiratory diseases in pigs, promoting further research to study the capability and possible uses of this technology for on farm monitoring and management.
Tail Docking of Piglets 2: Effects of Meloxicam on the Stress Response to Tail Docking
This experiment assessed the efficacy of the cauterisation procedure with or without pain relief (injectable meloxicam) in mitigating the acute stress response to tail docking. Male piglets (n = 432) were allocated to the following treatments at 2-d post-farrowing: (1) no handling, (2) sham handling, (3) tail docked using clippers, (4) tail docked using a cauteriser, (5) meloxicam + clipper, and (6) meloxicam + cauteriser. Meloxicam treatments used Metacam® at 5 mg/mL injected i.m. 1 h prior to tail docking. Blood samples were collected at 15 and 30 min post-treatment and analysed for total plasma cortisol. Behaviours indicative of pain such as escape attempts, vocalisations and standing with head lowered were measured. The duration of vocalisations and frequency of escape attempts during treatment were greater in all tail docking treatments compared to the sham treatment. Piglets in the clipper treatment had higher (p < 0.05) cortisol concentrations at 30 min but not 15 min after treatment and stood for longer (p < 0.001) with head lowered in the first 60 min after treatment than those in the cauterisation treatment. Meloxicam reduced (p < 0.05) both the cortisol response at 30 min after tail docking with the clipper as well as the behavioural response in the first 60 min after tail docking with the clipper. In comparison to the sham treatment, cortisol concentrations at 15 min were higher in the two tail docking treatments whereas the tail docking treatments with meloxicam were similar to the sham handling treatment. In comparison to the sham handling treatment, cortisol concentrations at 30 min post-docking were higher (p < 0.05) only in the clipper treatment. While cauterisation appears to be less aversive than the clipper procedure, the administration of meloxicam did not mitigate the behavioural response during tail docking using either procedure, but reduced standing with head lowered in the first hour after docking for both methods. The commercial viability of administration of meloxicam requires consideration before it is recommended for use compared to cauterisation alone, as it requires additional handling of piglets and costs.