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Recent collection efforts along the Brazilian coast revealed a Haliclona species preliminarily identified as a likely new species. However, sequencing of the 28S rRNA C-Region, a barcode marker in sponges, showed its high genetic similarity with a Haliclona sp. from Hawaiʻi (GenBank MW016137–MW016139). We applied an integrated morphological and molecular assessment, which allowed us to identify both Brazilian and Hawaiian specimens as H. ( Reniera ) laubenfelsi , a species with an Indo-Pacific distribution. We postulate this species to be exotic both in the Brazilian coast and in Hawaiʻi. Our evidence is based on the arrival of the species in Brazil after 2001, being first registered next to an international port. In turn, the species is distributed discontinuously in Hawaiʻi, being mainly restricted to sheltered bays and vicinities of ports, showing a predilection for anthropogenic substrates, which strengthen the hypothesis of its exotic origin. Recent collections in Hawaiʻi (2016–2018) failed to find this species in natural habitats, though it was an abundant pioneer species in Autonomous Reef Monitoring Structures. Its capacity to colonize artificial substrata may indicate either a cryptobenthic nature or an invasive potential. We highlight the need of monitoring its abundance, spatial distribution, and biotic interactions along the Brazilian coast to assess its potential environmental impacts. The full morphological description, and the molecular sequences we provided certainly will speed up the identification of this species, allowing to track its range extension.

Human overexploitation of natural resources has placed conservation and management as one of the most pressing challenges in modern societies, especially in regards to highly vulnerable marine ecosystems. In this context, cryptic species are particularly challenging to conserve because they are hard to distinguish based on morphology alone, and thus it is often unclear how many species coexist in sympatry, what are their phylogenetic relationships and their demographic history. We answer these questions using morphologically similar species of the genus Mugil that are sympatric in the largest coastal Marine Protected Area in the Tropical Southwestern Atlantic marine province. Using a sub-representation of the genome, we show that individuals are assigned to five highly differentiated genetic clusters that are coincident with five mitochondrial lineages, but discordant with morphological information, supporting the existence of five species with conserved morphology in this region. A lack of admixed individuals is consistent with strong genetic isolation between sympatric species, but the most likely species tree suggests that in one case speciation has occurred in the presence of interspecific gene flow. Patterns of genetic diversity within species suggest that effective population sizes differ up to two-fold, probably reflecting differences in the magnitude of population expansions since species formation. Together, our results show that strong morphologic conservatism in marine environments can lead to species that are difficult to distinguish morphologically but that are characterized by an independent evolutionary history, and thus that deserve species-specific management strategies.

The Tropical Southwestern Atlantic is characterized by prominent ecosystems with large-scale oceanographic complexity. Yet, the evolutionary processes underlying genetic differentiation and connectivity in this region remain largely unknown. Entomacrodus vomerinus (Valenciennes, 1836) is a demersal fish with planktonic larvae endemic to this marine province, inhabiting shallow tidal pools in continental and oceanic reef environments. We evaluated the population structure, genetic diversity and gene flow of E. vomerinus using mitochondrial data (CYTB and COI) and nuclear (rhodopsin, RHO) DNA sequences. We sampled a total of 85 individuals, comprising 46 from three oceanic archipelagos with varying distance from the coast (São Pedro and São Paulo-SS, Fernando de Noronha-FE and Rocas Atoll-RA) and 39 from two localities in northeastern Brazilian coast (Rio Grande do Norte-RN and Bahia-BA). Multilocus analysis revealed the presence of three Evolutionarily Significant Units-ESUs (SS, FE+RA, and RN+BA), which are in accordance with distinct marine ecoregions. Coalescent analyses showed that the central ESU has a larger effective population size than the other two, suggesting strong asymmetries in the genetic diversity across the species range. Moreover, they showed that gene flow is highly asymmetric, suggesting a source-sink dynamics from the central ESU into the remaining ones, in agreement with oceanic currents. Together, these results provide insights in the evolutionary mechanisms facilitating diversification in this marine province.

Siphonops paulensis Boettger, 1892 is a Neotropical siphonopid caecilian widely distributed in South America. Herein, we fill knowledge gaps in the distribution of S. paulensis mostly in northeastern Brazil, including four new state records.

The Atlantic Forest is recognized as a global biodiversity hotspot, but despite the comparatively large number of published reptile inventories already available for this region, large geographic gaps remain unfilled. The purpose of this paper is to provide a list of reptile species recorded in the Área de Proteção Ambiental do Catolé e Fernão Velho (APACFV), a 37 km² peri-urban protected area in the northern Atlantic Forest in the Brazilian state of Alagoas. Based on a review of reptile specimens and photographs collected over 27 years, a total of 65 species belonging to three orders and 22 families occur in the APACFV: three turtle families (4 spp.), one alligator family (2 spp.), 12 non-snake lizard families (24 spp.), and six snake families (35 spp.). Despite the imperilment of the biota of this region, only one of the recorded species is included on the endangered species list of the Brazilian government (Amerotyphlops paucisquamus, Vulnerable), and none are categorized as threatened under the Red List of Threatened Species of the International Union for Conservation of Nature. The reptile assemblage in the APACFV is among the most diverse documented for Alagoas, and this list is an important step to inform management strategies in this protected area. La Mata Atlántica es reconocida como un punto crítico de biodiversidad global, pero a pesar de la cantidad comparativamente grande de inventarios de reptiles publicados que ya están disponibles para esta región, aún quedan grandes vacíos geográficos por llenar. El propósito de este trabajo es proporcionar una lista de especies de reptiles registrados en el Área de Protección Ambiental do Catolé e Fernão Velho (APACFV), un área protegida periurbana de 37 km² en la parte norte de la Mata Atlántica en el estado brasileño de Alagoas. Con base en una revisión de especímenes y fotografías de reptiles recolectados durante un período de 27 años, un total de 65 especies pertenecientes a tres órdenes y 22 familias ocurren en el APACFV: tres familias de tortugas (4 spp.), una familia de cocodrilos (2 spp.), 12 familias de lagartos que no son serpientes (24 spp.) y seis familias de serpientes (35 spp.). A pesar del peligro de la biota de esta región, solo una de las especies registradas está categorizada como amenazada en la lista de especies en peligro de extinción de Brasil (Amerotyphlops paucisquamus, Vulnerable), y ninguno está clasificado como amenazada en la Lista Roja de Especies Amenazadas de la Unión Internacional para la Conservación de la Naturaleza. El conjunto de reptiles en el APACFV se encuentra entre los más diversos documentados para Alagoas, y esta lista es un paso importante para informar las estrategias de manejo en esta área protegida.

Sea turtles are migratory species with wide geographical distributions, usually spanning multiple countries. This characteristic, along with their complex life cycle, makes sea turtle conservation challenging. In Brazil, continued monitoring and recent studies have advanced the knowledge of sea turtle genetic composition and population structure. Some of these studies have shown that hybridization is highly frequent in certain regions along the Brazilian coast, despite being relatively rare globally. Here, we investigate the hybridization and genetic diversity of sea turtles in nesting and feeding grounds in the state of Alagoas, northeastern Brazil, using the control region of mitochondrial DNA and three nuclear loci. We were able to identify hybrids between four sea turtle species, but mainly between Caretta caretta and Eretmochelys imbricata and C. caretta and Lepidochelys olivacea. Most hybrids were readily identified using morphology and mitochondrial DNA, but some were only detected with nuclear DNA. Apart from hybrids, the genetic profile of each species was congruent with previous studies in Brazil. However, one stranded E. imbricata had a haplotype (Ei-IP17) and nuclear allele typically found in the Indo-Pacific, suggesting long distance migration for this species. Our results indicate that hybridization events might be even more geographically spread along the coast of Brazil and provide evidence of the connection between E. imbricata from the Atlantic and Indo-Pacific Ocean basins.

Although anuran tadpoles are widely distributed and abundant in tropical aquatic habitats, there is a lack of taxonomic keys for the Atlantic Forest. Herein, we developed a dichotomous key for identifying the tadpoles for all species with known larval phase and already recorded in the Atlantic Forest north of the São Francisco River. We analyzed discrete characteristics of 1,042 tadpoles encompassing 63 species of 28 genera from 32 localities. The user-friendly key includes illustration and pictures, and it is a significant step towards improving our knowledge of tadpoles of the Atlantic Forest. Resumo: Embora os girinos de anuros sejam amplamente distribuídos e abundantes em habitats aquáticos tropicais, não há chaves taxonômicas suficientes para as espécies da Mata Atlântica. Aqui, desenvolvemos uma chave dicotômica para identificar os girinos de todas as espécies com fase larval conhecida e já registradas nesse bioma, ao norte do rio São Francisco. Nós analisamos características discretas de 1.042 girinos pertencentes a 63 espécies (28 gêneros) de 32 localidades. Esta chave de identificação inclui ilustrações e imagens, sendo um passo significativo para um melhor conhecimento dos girinos da Mata Atlântica.

The aquatic pathogen Batrachochytrium dendrobatidis (Bd) can cause declines in amphibian populations and species extinctions worldwide. In tadpoles, epizootic events have not been reported; however, there is a possibility for rapid spread of disease in water. Here, we quantified Bd infection dynamics in tadpoles from two streams in the northeastern Atlantic forest of Brazil. Bd prevalence varied seasonally and increased during the rainy season. Aplastodiscus sibilatus and Proceratophrys renalis tadpoles were Bd positive in both seasons, whereas Agalychnis granulosa tadpoles were Bd positive only during the rainy season. Bd prevalence was higher in A. sibilatus than in A. granulosa and P. renalis. We found that larger individuals have a higher probability of being Bd positive, independent of the developmental stage. Moreover, we found that canopy cover, water flow, water temperature, water depth, and pH were associated with Bd prevalence. Our results highlight the fact that tadpoles can serve as pathogen reservoirs; therefore, monitoring anuran larvae populations in these habitats can enhance the impact assessment of this pathogen in biodiversity hot spots.

Pipidae is a clade of Anura that diverged relatively early from other frogs in the phylogeny of the group. Pipids have a unique combination of morphological features, some of which appear to represent a mix of adaptations to aquatic life and plesiomorphic characters of Anura. The present study describes the karyotype of Pipa carvalhoi Miranda-Ribeiro, 1937, including morphology, heterochromatin distribution, and location of the NOR site. The diploid number of P. carvalhoi is 2n=20, including three metacentric pairs (1, 4, 8), two submetacentric (2 and 7), three subtelocentric (3, 5, 6), and two telocentric pairs (9 and 10). C-banding detected centromeric blocks of heterochromatin in all chromosome pairs and the NOR detected in chromosome pair 9, as confirmed by FISH using the rDNA 28S probe. The telomeric probes indicated the presence of interstitial telomeric sequences (ITSs), primarily in the centromeric region of the chromosomes, frequently associated with heterochromatin, suggesting that these repeats are a significant component of this region. The findings of the present study provide important insights for the understanding of the mechanisms of chromosomal evolution in the genus Pipa , and the diversification of the Pipidae as a whole.

Species in the Adelophryne genus consist of diminutive, agile, and secretive frogs that inhabit forest leaf litter and have direct development. Species richness within Adelophryne was previously underestimated, and several new species have recently been described. Here, we describe a new species of Adelophryne from the Atlantic Forest in the Brazilian states of Alagoas, Pernambuco, and Paraíba. The new species is characterized by its small body size, small and distinct tympanum, toes with subarticular tubercles, fingers mucronate, three phalanges in the Finger IV, and an advertisement call composed of one single pulsed note with a high dominant frequency. The new species is phylogenetically related to other Adelophryne species of the Northern Atlantic Forest Clade and is endemic to the “Pernambuco Endemism Center” in the Atlantic Forest biodiversity hotspot.