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32
result(s) for
"Musgrove, Peter"
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Police crime recording and investigation systems
2001
This paper provides an overview of the role computer software plays within police forces with particular attention paid to crime analysis and investigation computer systems. A distinction is mode between major crime (e.g. murder, violent assault, rape, etc.) and volume crime (e.g domestic burglary, shoplifting, etc.).
Journal Article
Police crime recording and investigation systems - A user's view
2001
This paper provides an overview of the role computer software plays within police forces with particular attention paid to crime analysis and investigation computer systems. A distinction is made between major crime (e.g. murder, violent assault, rape, etc.) and volume crime (e.g. domestic burglary, shoplifting, etc.). Illustrative systems that are in practical use for tackling both major and volume crime are described. Particular attention is paid to the attempts that have been made to apply artificial intelligence techniques to tackling the volume crime of burglary. A topic of current research is the use of data mining techniques for automatically detecting patterns in reported crimes. The paper concludes by looking at the problems and benefits such systems may bring.
Journal Article
To really put our city on the map we need to draw in big business
by
Musgrove, Peter
in
Stadiums
2016
Since George Ferguson was elected four years ago, the city has come on enormously and it's become recognised, quite rightly, as one of the UK's top places to live and work.
Newspaper Article
Identification of unique neoantigen qualities in long-term survivors of pancreatic cancer
by
Riaz, Nadeem
,
Medina, Benjamin
,
Saglimbeni, Joseph
in
631/250/2520
,
631/67/1504/1713
,
631/67/580
2017
The analysis of T-cell antigens in long-term survivors of pancreatic ductal adenocarcinoma suggests that neoantigen immunogenicity and quality, not purely quantity, correlate with survival.
Neoantigen quality over quantity
A small percentage of patients with pancreatic cancer survive beyond five years, but the reason for their relative longevity remains uncertain. In this retrospective analysis, Vinod Balachandran
et al
. evaluate the immune mechanisms of long-term survival in human pancreatic cancer. The analysis shows that survival correlates with high mutation load in conjunction with increased infiltration of cytolytic T cells and polyclonal T-cell responses and that mutations at the tumour antigen MUC16 locus are enriched in long-term survivors. Additionally, patients with high predicted neoantigen–microbial cross-reactivity scores tended to live longest. The authors provide evidence that the quality rather than quantity of neoantigens determines survival.
Pancreatic ductal adenocarcinoma is a lethal cancer with fewer than 7% of patients surviving past 5 years. T-cell immunity has been linked to the exceptional outcome of the few long-term survivors
1
,
2
, yet the relevant antigens remain unknown. Here we use genetic, immunohistochemical and transcriptional immunoprofiling, computational biophysics, and functional assays to identify T-cell antigens in long-term survivors of pancreatic cancer. Using whole-exome sequencing and
in silico
neoantigen prediction, we found that tumours with both the highest neoantigen number and the most abundant CD8
+
T-cell infiltrates, but neither alone, stratified patients with the longest survival. Investigating the specific neoantigen qualities promoting T-cell activation in long-term survivors, we discovered that these individuals were enriched in neoantigen qualities defined by a fitness model, and neoantigens in the tumour antigen MUC16 (also known as CA125). A neoantigen quality fitness model conferring greater immunogenicity to neoantigens with differential presentation and homology to infectious disease-derived peptides identified long-term survivors in two independent datasets, whereas a neoantigen quantity model ascribing greater immunogenicity to increasing neoantigen number alone did not. We detected intratumoural and lasting circulating T-cell reactivity to both high-quality and MUC16 neoantigens in long-term survivors of pancreatic cancer, including clones with specificity to both high-quality neoantigens and predicted cross-reactive microbial epitopes, consistent with neoantigen molecular mimicry. Notably, we observed selective loss of high-quality and
MUC16
neoantigenic clones on metastatic progression, suggesting neoantigen immunoediting. Our results identify neoantigens with unique qualities as T-cell targets in pancreatic ductal adenocarcinoma. More broadly, we identify neoantigen quality as a biomarker for immunogenic tumours that may guide the application of immunotherapies.
Journal Article
DNA methylation of oestrogen-regulated enhancers defines endocrine sensitivity in breast cancer
by
Trau, Matt
,
Gee, Julia M. W.
,
Zotenko, Elena
in
631/208/176/1988
,
631/208/199
,
692/699/67/1059
2015
Expression of oestrogen receptor (ESR1) determines whether a breast cancer patient receives endocrine therapy, but does not guarantee patient response. The molecular factors that define endocrine response in ESR1-positive breast cancer patients remain poorly understood. Here we characterize the DNA methylome of endocrine sensitivity and demonstrate the potential impact of differential DNA methylation on endocrine response in breast cancer. We show that DNA hypermethylation occurs predominantly at oestrogen-responsive enhancers and is associated with reduced ESR1 binding and decreased gene expression of key regulators of ESR1 activity, thus providing a novel mechanism by which endocrine response is abated in ESR1-positive breast cancers. Conversely, we delineate that ESR1-responsive enhancer hypomethylation is critical in transition from normal mammary epithelial cells to endocrine-responsive ESR1-positive cancer. Cumulatively, these novel insights highlight the potential of ESR1-responsive enhancer methylation to both predict ESR1-positive disease and stratify ESR1-positive breast cancer patients as responders to endocrine therapy.
The molecular factors influencing patient response to endocrine therapy are poorly understood. Here Stone
et al.
characterize the DNA methylome of endocrine response and show that methylation of oestrogen receptor-associated enhancers underpins endocrine sensitivity in human breast cancer.
Journal Article
Genomic analyses identify molecular subtypes of pancreatic cancer
by
Leonard, Conrad
,
Kazakoff, Stephen
,
Anderson, Matthew J.
in
631/67/69
,
692/699/67/1504/1713
,
Animals
2016
Integrated genomic analysis of 456 pancreatic ductal adenocarcinomas identified 32 recurrently mutated genes that aggregate into 10 pathways:
KRAS, TGF-β, WNT, NOTCH, ROBO/SLIT
signalling,
G1/S
transition,
SWI-SNF
, chromatin modification, DNA repair and RNA processing. Expression analysis defined 4 subtypes: (1) squamous; (2) pancreatic progenitor; (3) immunogenic; and (4) aberrantly differentiated endocrine exocrine (ADEX) that correlate with histopathological characteristics. Squamous tumours are enriched for
TP53
and
KDM6A
mutations, upregulation of the
TP63∆N
transcriptional network, hypermethylation of pancreatic endodermal cell-fate determining genes and have a poor prognosis. Pancreatic progenitor tumours preferentially express genes involved in early pancreatic development (
FOXA2/3
,
PDX1
and
MNX1
). ADEX tumours displayed upregulation of genes that regulate networks involved in
KRAS
activation, exocrine (
NR5A2
and
RBPJL
), and endocrine differentiation (
NEUROD1
and
NKX2-2
). Immunogenic tumours contained upregulated immune networks including pathways involved in acquired immune suppression. These data infer differences in the molecular evolution of pancreatic cancer subtypes and identify opportunities for therapeutic development.
An integrated genomic analysis of 456 human pancreatic ductal adenocarcinomas identifies four subtypes defined by transcriptional expression profiles and show that these are associated with distinct histopathological characteristics and differential prognosis.
Pancreatic cancer genomics
Sean Grimmond and colleagues report integrated genomic analysis of 456 pancreatic ductal adenocarcinomas. They identify four subtypes defined by expression profiles, characterize their transcriptional networks, and show that these are associated with distinct histopathological characteristics and differential survival.
Journal Article