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result(s) for
"Neha, Sufia Akter"
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Resource partitioning and niche overlap between hoolock gibbon (Hoolock hoolock) and other frugivorous vertebrates in a tropical semi-evergreen forest
by
Akter, Neha Sufia
,
Khatun Ummay Habiba
,
Ul Hasan Md Ashraf
in
Competition
,
Coniferous forests
,
Diet
2021
Understanding how niche differences evolve in ecologically similar species and how these differences are maintained is a fundamental question in ecology. We studied resource partitioning and niche overlap between the hoolock gibbon (Hoolock hoolock) and other frugivorous vertebrates from April 2016 to January 2018 in Satchari National Park, Sylhet, Bangladesh. We examined the differences in their diet, niche breadth, niche overlap, and characterization of patch use. We recorded feeding events of gibbons and other frugivorous vertebrates using ad libitum sampling. Gibbons consumed 76 plant species including 32 non-fig fruits and 14 figs. Twenty-one competing frugivorous vertebrate species shared 10–70% of their food species with hoolocks. Competition for fruits was intense among gibbons, macaques, and hornbills, as fruits comprised more than 50% of their diet. The niche breadth of the gibbons varied across seasons. It was lowest during the rainy season (BA = 0.39) when fruits were more readily available, and highest in winter (BA = 0.58) when gibbons were less selective due to food scarcity. The niche overlap was highest between gibbons and northern pig-tailed macaques (Ojk = 0.70), followed by gibbons and hornbills (Ojk = 0.68). Feeding heights and substrate used varied significantly between gibbons and competitors. Gibbons may minimize competition by specializing on various food resources and using different forest patches.
Journal Article
Fine-scale spatial variation shape fecal microbiome diversity and composition in black-tailed prairie dogs (Cynomys ludovicianus)
2023
Background
Host associated gut microbiota are important in understanding the coevolution of host-microbe, and how they may help wildlife populations to adapt to rapid environmental changes. Mammalian gut microbiota composition and diversity may be affected by a variety of factors including geographic variation, seasonal variation in diet, habitat disturbance, environmental conditions, age, and sex. However, there have been few studies that examined how ecological and environmental factors influence gut microbiota composition in animals' natural environments. In this study, we explore how host habitat, geographical location and environmental factors affect the fecal microbiota of
Cynomys ludovicianus
at a small spatial scale. We collected fecal samples from five geographically distinct locations in the Texas Panhandle classified as urban and rural areas and analyzed them using high throughput 16S rRNA gene amplicon sequencing.
Results
The results showed that microbiota of these fecal samples was largely dominated by the phylum
Bacteroidetes
. Fecal microbiome diversity and composition differed significantly across sampling sites and habitats. Prairie dogs inhabiting urban areas showed reduced fecal diversity due to more homogenous environment and, likely, anthropogenic disturbance. Urban prairie dog colonies displayed greater phylogenetic variation among replicates than those in rural habitats. Differentially abundant analysis revealed that bacterial species pathogenic to humans and animals were highly abundant in urban areas which indicates that host health and fitness might be negatively affected. Random forest models identified
Alistipes shahii
as the important species driving the changes in fecal microbiome composition. Despite the effects of habitat and geographic location of host, we found a strong correlation with environmental factors and that- average maximum temperature was the best predictor of prairie dog fecal microbial diversity.
Conclusions
Our findings suggest that reduction in alpha diversity in conjunction with greater dispersion in beta diversity could be indicative of declining host health in urban areas; this information may, in turn, help determine future conservation efforts. Moreover, several bacterial species pathogenic to humans and other animals were enriched in prairie dog colonies near urban areas, which may in turn adversely affect host phenotype and fitness.
Journal Article
Impacts of host phylogeny, diet, and geography on the gut microbiome of rodents
by
Hanson, John D.
,
Wilkinson, Jeremy E.
,
Neha, Sufia Akter
in
Abundance
,
Animals
,
Bacteria - classification
2025
Mammalian gut microbial communities are thought to play a variety of important roles in health and fitness, including digestion, metabolism, nutrition, immune response, behavior, and pathogen protection. Gut microbiota diversity among hosts is strongly shaped by diet as well as phylogenetic relationships among hosts. Although various host factors may influence microbial community structure, the relative contribution may vary depending on several variables, such as taxonomic scales of the species studied, dietary patterns, geographic location, and gut physiology. The present study focused on 12 species of rodents representing 3 rodent families and 3 dietary guilds (herbivores, granivores, and omnivores) to evaluate the influence of host phylogeny, dietary guild and geography on microbial diversity and community composition. Colon samples were examined from rodents that were collected from 7 different localities in Texas and Oklahoma which were characterized using 16S rRNA gene amplicon sequencing targeting the V1-V3 variable regions. The microbiota of colon samples was largely dominated by the family Porphyromonadaceae ( Parabacteriodes , Coprobacter ) and herbivorous hosts harbored richer gut microbial communities than granivores and omnivores. Differential abundance analysis showed significant trends in the abundance of several bacterial families when comparing herbivores and granivores to omnivores, however, there were no significant differences observed between herbivores and granivores. The gut microbiotas displayed patterns consistent with phylosymbiosis as host phylogeny explained more variation in gut microbiotas (34%) than host dietary guilds (10%), and geography (3%). Overall, results indicate that among this rodent assemblage, evolutionary relatedness is the major determinant of microbiome compositional variation, but diet and to a lesser extent geographic provenance are also influential.
Journal Article
Impacts of host phylogeny, diet, and geography on the gut microbiome of rodents
2025
Mammalian gut microbial communities are thought to play a variety of important roles in health and fitness, including digestion, metabolism, nutrition, immune response, behavior, and pathogen protection. Gut microbiota diversity among hosts is strongly shaped by diet as well as phylogenetic relationships among hosts. Although various host factors may influence microbial community structure, the relative contribution may vary depending on several variables, such as taxonomic scales of the species studied, dietary patterns, geographic location, and gut physiology. The present study focused on 12 species of rodents representing 3 rodent families and 3 dietary guilds (herbivores, granivores, and omnivores) to evaluate the influence of host phylogeny, dietary guild and geography on microbial diversity and community composition. Colon samples were examined from rodents that were collected from 7 different localities in Texas and Oklahoma which were characterized using 16S rRNA gene amplicon sequencing targeting the V1-V3 variable regions. The microbiota of colon samples was largely dominated by the family Porphyromonadaceae (Parabacteriodes, Coprobacter) and herbivorous hosts harbored richer gut microbial communities than granivores and omnivores. Differential abundance analysis showed significant trends in the abundance of several bacterial families when comparing herbivores and granivores to omnivores, however, there were no significant differences observed between herbivores and granivores. The gut microbiotas displayed patterns consistent with phylosymbiosis as host phylogeny explained more variation in gut microbiotas (34%) than host dietary guilds (10%), and geography (3%). Overall, results indicate that among this rodent assemblage, evolutionary relatedness is the major determinant of microbiome compositional variation, but diet and to a lesser extent geographic provenance are also influential.
Journal Article
An inventory of butterfly species in relation to food sources and climatic factors influencing their diversity and richness in a semievergreen forest of Bangladesh
by
Mohammad Abdul Baki, et al
,
Md. Ashraf Ul Hasan
,
Sufia Akter Neha
in
butterfly
,
climatic factors
,
diversity
2018
An inventory of butterfly species in relation to food sources and climatic factors influencing their diversity and richness was studied from March 2015 to February 2017 in Satchari National Park. We recorded 195 butterfly species representing 125 genera under 21 subfamilies and 6 families. Nymphalidae was the more dominant family contributed 32.8% of the total species followed by Lycaenidae (25.7%), Hesperiidae (24.6%), Pieridae (8.2%), Papilionidae (7.7%) and Riodinidae (1.0%). The highest species diversity and richness were reported from pre-monsoon. Out of 195 species identified in the Satchari National Park, 79 species (40.5%) were observed sipping out only nectar from different flower sources while others obtained their food from both floral and non-floral resources such as puddles, excreta, carrion, rotten fruit and blood of vertebrates. Highest number of butterflies were documented from Lantana camara (73) followed by Chromolaena odorata (60), Leea indica (30), Tridax procumbens (23) and Mikania micrantha (15) respectively. The butterflies were most frequently attracted to white flowers (52.2%) during nectar feeding. Temperature was positively correlated with the total number of species (r=0.417, p=0.04) whereas rainfall and humidity were negatively correlated with the total number of species (r=-0.43, p=0.03 and r=-0.50, p=0.01).
Journal Article