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result(s) for
"Offner, Susan"
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Using Mollusk Phylogeny to Teach Evolution
2014
New phylogenomic tools have made it possible to construct a robust phylogenetic tree of mollusks. This tree can be used to teach important evolutionary principles.
Journal Article
The Role of MC1R in Speciation & Phylogeny
2013
A point mutation in the MC1R gene, a G-protein-coupled receptor, has been found that could have led to the formation of two subspecies of Solomon Island flycatcher from a single ancestral population. I discuss the many roles that G-protein-coupled receptors play in vertebrate physiology and how one particular point mutation can have enormous evolutionary consequences.
Journal Article
Royal Hemophilia
2013
The mutation that caused hemophilia in European royal families during the 19th century has been characterized and presents excellent teaching opportunities.
Journal Article
Using the Boiling Point of Water to Learn about Hydrogen Bonds
2012
The boiling point of water is 300°C higher than expected because of hydrogen bonds.
Journal Article
Cluster J Mycobacteriophages: Intron Splicing in Capsid and Tail Genes
by
Pope, Welkin H.
,
Ogiefo, Amenawon H.
,
Dedrick, Rebekah M.
in
Amino Acid Sequence
,
Analysis
,
Bacteriolysis - genetics
2013
Bacteriophages isolated on Mycobacterium smegmatis mc(2)155 represent many distinct genomes sharing little or no DNA sequence similarity. The genomes are architecturally mosaic and are replete with genes of unknown function. A new group of genomes sharing substantial nucleotide sequences constitute Cluster J. The six mycobacteriophages forming Cluster J are morphologically members of the Siphoviridae, but have unusually long genomes ranging from 106.3 to 117 kbp. Reconstruction of the capsid by cryo-electron microscopy of mycobacteriophage BAKA reveals an icosahedral structure with a triangulation number of 13. All six phages are temperate and homoimmune, and prophage establishment involves integration into a tRNA-Leu gene not previously identified as a mycobacterial attB site for phage integration. The Cluster J genomes provide two examples of intron splicing within the virion structural genes, one in a major capsid subunit gene, and one in a tail gene. These genomes also contain numerous free-standing HNH homing endonuclease, and comparative analysis reveals how these could contribute to genome mosaicism. The unusual Cluster J genomes provide new insights into phage genome architecture, gene function, capsid structure, gene mobility, intron splicing, and evolution.
Journal Article
Reconsidering Animal Phylogeny: Tree-Thinking
2016
New phylogenomic methods have made it possible to obtain a robust phylogenetic tree of the animal kingdom. The resulting tree confirms much of what was already known but also contains some nice surprises.
Journal Article
Tips, Tricks & Techniques: Using Great Ape Phylogeny to Teach Evolutionary Thinking
2016
A simple phylogenetic tree of the great apes provides many important teaching opportunities, both in the general skill of reading phylogenetic trees and in using them to explore evolutionary relationships.
Journal Article
Using Great Ape Phylogeny to Teach Evolutionary Thinking
2016
A simple phylogenetic tree of the great apes provides many important teaching opportunities, both in the general skill of reading phylogenetic trees and in using them to explore evolutionary relationships.
Journal Article