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Establishment of conservation priorities for primates is a particular concern in the island archipelagos of Southeast Asia, where rates of habitat destruction are among the highest in the world. Conservation programs require knowledge of taxonomic diversity to ensure success. The Philippine tarsier is a flagship species that promotes environmental awareness and a thriving ecotourism economy in the Philippines. However, assessment of its conservation status has been impeded by taxonomic uncertainty, a paucity of field studies, and a lack of vouchered specimens and genetic samples available for study in biodiversity repositories. Consequently, conservation priorities are unclear. In this study we use mitochondrial and nuclear DNA to empirically infer geographic partitioning of genetic variation and to identify evolutionarily distinct lineages for conservation action. The distribution of Philippine tarsier genetic diversity is neither congruent with expectations based on biogeographical patterns documented in other Philippine vertebrates, nor does it agree with the most recent Philippine tarsier taxonomic arrangement. We identify three principal evolutionary lineages that do not correspond to the currently recognized subspecies, highlight the discovery of a novel cryptic and range-restricted subcenter of genetic variation in an unanticipated part of the archipelago, and identify additional geographically structured genetic variation that should be the focus of future studies and conservation action. Conservation of this flagship species necessitates establishment of protected areas and targeted conservation programs within the range of each genetically distinct variant of the Philippine tarsier.

The short-wavelength sensitive (S-) opsin gene OPN1SW is pseudogenized in some nocturnal primates and retained in others, enabling dichromatic colour vision. Debate on the functional significance of this variation has focused on dark conditions, yet many nocturnal species initiate activity under dim (mesopic) light levels that can support colour vision. Tarsiers are nocturnal, twilight-active primates and exemplary visual predators; they also express different colour vision phenotypes, raising the possibility of discrete adaptations to mesopic conditions. To explore this premise, we conducted a field study in two stages. First, to estimate the level of functional constraint on colour vision, we sequenced OPN1SW in 12 wild-caught Philippine tarsiers (Tarsius syrichta). Second, to explore whether the dichromatic visual systems of Philippine and Bornean (Tarsius bancanus) tarsiers—which express alternate versions of the medium/long-wavelength sensitive (M/L-) opsin gene OPN1MW/OPN1LW—confer differential advantages specific to their respective habitats, we used twilight and moonlight conditions to model the visual contrasts of invertebrate prey. We detected a signature of purifying selection for OPN1SW, indicating that colour vision confers an adaptive advantage to tarsiers. However, this advantage extends to a relatively small proportion of prey–background contrasts, and mostly brown arthropod prey amid leaf litter. We also found that the colour vision of T. bancanus is advantageous for discriminating prey under twilight that is enriched in shorter (bluer) wavelengths, a plausible idiosyncrasy of understorey habitats in Borneo. This article is part of the themed issue ‘Vision in dim light’.

Among the richest in biodiversity globally has been the Philippine rainforest, which used to cover about 90% of the country’s land area. During the last few decades, the forest cover has been reduced to less than 10% of the original, only a fraction of which is old-growth forest. The negative impacts of deforestation led to the launching of the National Greening Program (NGP) that involved the planting of more than a billion seedlings over a few million hectares of land from 2011 to 2016. To assess the success of the NGP, satellite data from Landsat and the Moderate Resolution Imaging Spectroradiometer (MODIS) were analyzed before, during, and after the NGP. Reforestation in the NGP sites was examined concurrently with observed deforestation in Luzon using forest loss data derived from Landsat for the period 2001 to 2018. The results show that losses declined from 2011 to 2015 but increased from 2016 to 2018. Because of such losses, the net effect is a balance of reforestation and deforestation or no significant gain from the NGP. Case studies were done in three sites in the Sierra Madre forest, where half of the remaining old-growth forest is located, using a combination of Landsat and Very High Resolution (VHR) data. The Landsat data were classified into closed forest, open forest, and other vegetation cover types. The conversion from one vegetation cover type to another was evaluated through the use of the Sankey Diagram. While some non-forest types became open or closed forests, the loss of open or closed forests is more pronounced. VHR data reveal critical issues happening within the NGP sites during the NGP period. More comprehensive data from MODIS also confirm that there was no significant increase in the forest cover in Luzon, Sierra Madre, and Cordillera from 2001 to 2018.

Sleep and sleep-related behaviors are integral components of primate behavior and ecology that are linked to various habitat-specific factors and often are modified in response to environmental fluctuations and threats. Despite the growing literature on primates, information on sleep-related behaviors of tarsiers remains sparse, especially for Philippine tarsiers, where our current understanding is hampered by the paucity of studies on wild populations. We radio-tracked eight Philippine tarsiers inhabiting a protected forest fragment between December 2016 and February 2018 to assess their sleeping site selection, sleep-related positional behavior, and social system. From 266 instantaneous sampling bouts, where each tarsier was observed a maximum of once per day, we found that the tarsiers frequently used trees with thickets of lianas and at least 15 plant species as sleeping sites. They slept from ground level to above 8 m, with most sightings at 3 to 6 m, and recurrent detections above 8 m, and preferred a flexed resting posture, on angled or horizontal, small-sized lianas or branches. Although frequently solitary, they also slept in pairs and in small groups of up to four individuals. We inferred polygyny based on observations of one adult male who associated and huddled with two nonassociated adult females, and direct male care through huddling and accompaniment. Our study revealed increased height use and gregariousness not previously described for Philippine tarsiers, shedding light on potential flexible behaviors by nocturnal primates in fragmented landscapes. Sleep-related behaviors present another avenue of research that has important implications on their conservation.

The Philippine tarsier (Tarsius syrichta) is a charismatic species that is threatened by illegal hunting and deforestation. Although they occur in forest and disturbed habitats, ecological information about them is still considerably lacking, which consequently hampers our ability to effectively protect tarsiers from further endangerment. Here, we characterized a 36-ha forest fragment in Mindanao Island where a population of tarsiers persist, and assessed the factors that could have influenced their distribution within the area. We sampled trees (> 1 cm DBH) within 10 × 10-m sampling plots (N = 54), which were established within 1-ha grids (N = 32) and locations where tarsiers were captured (N = 22). The habitat was characterized as a regenerating forest over limestone, with a generally homogeneous structure in terms of tree species richness, abundance, mean DBH, and height. In both sampling plots, we found an abundance of trees below 5 cm in DBH (> 50%) and between 2.6 and 5 m in height (> 40%), which, accordingly, the tarsiers appeared to prefer to use when foraging or sleeping. Lianas were among the most important features of the forest, possibly being a keystone structure in such habitats. Community assemblage, species richness, and mean height of trees, as well as distance to the forest edge, were found to be significant factors that influenced tarsier distribution in the fragment. Our study provides basic yet critical information on the habitat and ecology of Philippine tarsiers in Mindanao, and highlights the importance of forest fragments with rich flora diversity to the survival of the species.

There are growing needs to broaden and deepen our multi-faceted understanding of the ecosystems, and the networks of Long-Term Ecological Research (LTER) can play significant roles in fostering and applying ecosystem studies at regional and global scales. The International LTER Network (ILTER) is organized as a global network of field research sites and scientists to address current ecological issues such as biodiversity loss and ecosystem degradation within a globally changing environment. The ILTER East Asia–Pacific Regional Network (ILTER-EAP) is one of the four constituent ILTER regional networks. Since 1995, ILTER-EAP has been developed to promote data sharing, research collaborations and capability building in the science and to bridge gaps between societal needs and scientific imperatives on concerns in the Asia–Pacific Region. Currently, ILTER-EAP comprises nine formal ILTER members and two associate networks. Their activities involve long-term and multiple-site observations of structural, functional and developmental aspects of ecosystems, data sharing, and bridging society and ecological science. This paper presents a review of the activities of ILTER-EAP, focusing on its: (1) vision and the development following its inception, (2) scientific activities and major outputs related to selected thematic areas, (3) contributions from ILTER-EAP to the international initiatives, and (4) future challenges and opportunities relating to its development and role in facilitating regional and global research collaborations. Accordingly, regional research questions were identified that could be most effectively addressed by opening up a common research platform, integrated data management system and the network science, which is open to all interested parties.

As cyclonic wind storms (hurricanes and typhoons) increase in frequency and intensity with climate change, it is important to understand their effects on the populations and communities of tropical trees they impact. Using tree demographic data from four large, tropical forest dynamics plots that differ in cyclonic storm frequency, we compare tree population and community dynamics. Additionally, we assess the effect of cyclonic storms on three functional traits, specific leaf area, wood density, and tree height of the dynamic tree assemblages. Mortality, growth and recruitment rates and the intrinsic rates of population growth of species differed across the plots, and were most dynamic, especially for stems 1–2 cm in diameter, at the plot which had an intermediate level of cyclonic storm frequency. Functional assemblages of species had the greatest degree of temporal variation in relation to disturbance, as measured by the change in functional divergence for the two plots with more intermediate cyclonic storm recurrence. Therefore, cyclonic storms affecting these plots generally have a greater effect on forest composition and dynamism than comparable cyclonic storms do on the plot which experiences cyclonic storms more frequently. Thus, we provide some evidence that community-wide demographic resistance to cyclonic storms is generally lower at an intermediate frequency of storms. While cyclonic storm strength and timing are important determinants of the within forest variation in tree dynamics and functional trait assemblages, we also show that cyclonic storm timing and frequency shapes tropical forest dynamics and functional composition across forests. We conclude that, over a given time interval, sites with intermediate levels of damaging cyclonic wind disturbance express a greater potential for life-history variation in the forest community, when compared to sites with less or more frequent disturbance.

A new species, Medinillatheresae Fernando, from ultramafic soils on Dinagat and Mindanao Islands, Philippines is described and illustrated. The species is characterized by its terrestrial erect habit, non-setose nodes, 3-plinerved, lanceolate and coriaceous leaves arranged in whorls, cauline or axillary and pendulous inflorescences, rounded flower buds, 4-merous flowers, and straight anthers. It is compared with other similar species in the Medinillapendula Merr. complex.

Survival rates of large trees determine forest biomass dynamics. Survival rates of small trees have been linked to mechanisms that maintain biodiversity across tropical forests. How species survival rates change with size offers insight into the links between biodiversity and ecosystem function across tropical forests. We tested patterns of size-dependent tree survival across the tropics using data from 1,781 species and over 2 million individuals to assess whether tropical forests can be characterized by size-dependent life-history survival strategies. We found that species were classifiable into four ‘survival modes’ that explain life-history variation that shapes carbon cycling and the relative abundance within forests. Frequently collected functional traits, such as wood density, leaf mass per area and seed mass, were not generally predictive of the survival modes of species. Mean annual temperature and cumulative water deficit predicted the proportion of biomass of survival modes, indicating important links between evolutionary strategies, climate and carbon cycling. The application of survival modes in demographic simulations predicted biomass change across forest sites. Our results reveal globally identifiable size-dependent survival strategies that differ across diverse systems in a consistent way. The abundance of survival modes and interaction with climate ultimately determine forest structure, carbon storage in biomass and future forest trajectories. Data from 2 million individual trees spanning 1,781 species reveal that tropical forests can be grouped into four size-dependent life-history survival modes, the application of which in demographic simulations predicts biomass change.

A new species of Rafflesia (Rafflesiaceae) from Luzon Island, Philippines, Rafflesia consueloae Galindon, Ong & Fernando, is described and illustrated. It is distinct from all other species of Rafflesia in its small-sized flowers, the upright perigone lobes, and prominently cream-white disk surface that is often devoid of processes. Its small-sized flowers, with an average diameter of 9.73 cm when fully expanded, make it the smallest of the largest flowers in the world.