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19 result(s) for "Römer, Philipp"
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Reduced Temperature Sensitivity of Maximum Latewood Density Formation in High-Elevation Corsican Pines under Recent Warming
Maximum latewood density (MXD) measurements from long-lived Black pines (Pinus nigra spp. laricio) growing at the upper treeline in Corsica are one of the few archives to reconstruct southern European summer temperatures at annual resolution back into medieval times. Here, we present a compilation of five MXD chronologies from Corsican pines that contain high-to-low frequency variability between 1168 and 2016 CE and correlate significantly (p < 0.01) with the instrumental April–July and September–October mean temperatures from 1901 to 1980 CE (r = 0.52−0.64). The growth–climate correlations, however, dropped to −0.13 to 0.02 afterward, and scaling the MXD data resulted in a divergence of >1.5 °C between the colder reconstructed and warmer measured temperatures in the early-21st century. Our findings suggest a warming-induced shift from initially temperature-controlled to drought-prone MXD formation, and therefore question the suitability of using Corsican pine MXD data for climate reconstruction.
Using machine learning on tree‐ring data to determine the geographical provenance of historical construction timbers
Dendroclimatology offers the unique opportunity to reconstruct past climate at annual resolution and wood from historical buildings can be used to extend such information back in time up to several millennia. However, the varying and often unclear origin of timbers affects the climate sensitivity of individual tree‐ring samples. Here, we compare tree‐ring width and density of 143 living larch (Larix decidua Mill.) trees at seven sites along an elevational transect from 1400 to 2200 m asl and 99 historical tree‐ring series to parametrize state‐of‐the‐art classification models for the European Alps. To achieve geographical provenance of the historical series, nine different supervised machine learning algorithms are trained and tested in their capability to solve our classification problem. Based on this assessment, we consider a tree‐ring density‐based and a tree‐ring width‐based dataset for model building. For each of these datasets, a general not species‐related model and a larch‐specific model including the cyclic larch budmoth influence are built. From the nine tested machine learning algorithms, Extreme Gradient Boosting showed the best performance. The density‐based models outperform the ring‐width models with the larch‐specific density model reaching the highest skill (f1 score = 0.8). The performance metrics reveal that the larch‐specific density model also performs best within individual sites and particularly in sites above 2000 m asl, which show the highest temperature sensitivities. The application of the specific density model for larch allows the historical series to be assigned with high confidence to a particular elevation within the valley. The procedure can be applied to other provenance studies using multiple tree growth characteristics. The novel approach of building machine learning models based on tree‐ring density features allows to omit a common period between reference and historical data for finding the provenance of relict wood and will therefore help to improve millennium‐length climate reconstructions.
Scaling the U-net: segmentation of biodegradable bone implants in high-resolution synchrotron radiation microtomograms
Highly accurate segmentation of large 3D volumes is a demanding task. Challenging applications like the segmentation of synchrotron radiation microtomograms (SRμCT) at high-resolution, which suffer from low contrast, high spatial variability and measurement artifacts, readily exceed the capacities of conventional segmentation methods, including the manual segmentation by human experts. The quantitative characterization of the osseointegration and spatio-temporal biodegradation process of bone implants requires reliable, and very precise segmentation. We investigated the scaling of 2D U-net for high resolution grayscale volumes by three crucial model hyper-parameters (i.e., the model width, depth, and input size). To leverage the 3D information of high-resolution SRμCT, common three axes prediction fusing is extended, investigating the effect of adding more than three axes prediction. In a systematic evaluation we compare the performance of scaling the U-net by intersection over union (IoU) and quantitative measurements of osseointegration and degradation parameters. Overall, we observe that a compound scaling of the U-net and multi-axes prediction fusing with soft voting yields the highest IoU for the class “degradation layer”. Finally, the quantitative analysis showed that the parameters calculated with model segmentation deviated less from the high quality results than those obtained by a semi-automatic segmentation method.
Enormous headward and gully erosion in a floodplain area reclaimed for open-cast lignite mining during the July 2021 flood in the Inde River valley (Western Germany)
Background The July flood 2021 at the mountain front of the Eifel-Ardennes Mountains and their foreland resulted in the flooding of the lignite mining area of Inden in Germany. The mining activities resulted in large-scale anthropogenic changes to the relief and fluvial system, leading to a landscape that is no longer adjusted to the recent process-response system. This paper concentrates on the Inde River, where lignite mining led to the relocation of a 5-km-long river section. The flood event resulted in the temporary avulsion of the Inde River into the former channel and, ultimately, in the flooding of the open-cast lignite mine Inden. Results The flooding of the open-cast lignite mine Inden led to headwall erosion and enormous sediment mobilisation, mobilising more than half a million cubic metres of sediment within a few hours, forming a 700-m-long deeply incised channel cut. Thereby, the underlying bedrock, near-subsurface man-made structures, and former river channels influence the erosional processes to different degrees. Surface erosion is likely to be the decisive process, and subsurface erosion is likely to play a secondary role. In both cases, former channels and mill ditches were likely impacting the course of erosional processes. Conclusions During high flood events open-cast mining sites in floodplains are endangered by enormous erosion and sediment transport within a short period of time (several hours). Understanding such complex erosion and depositional processes in open-cast mining areas could provide a blueprint for geomorphological processes and hazards in these anthropogenically shaped fluvial landscapes. Further, information on historic impact in the area is crucial to estimate potential risks.
CRUP: a comprehensive framework to predict condition-specific regulatory units
We present the software Condition-specific Regulatory Units Prediction (CRUP) to infer from epigenetic marks a list of regulatory units consisting of dynamically changing enhancers with their target genes. The workflow consists of a novel pre-trained enhancer predictor that can be reliably applied across cell types and species, solely based on histone modification ChIP-seq data. Enhancers are subsequently assigned to different conditions and correlated with gene expression to derive regulatory units. We thoroughly test and then apply CRUP to a rheumatoid arthritis model, identifying enhancer-gene pairs comprising known disease genes as well as new candidate genes.
Reducing Energy Demand Using Wheel-Individual Electric Drives to Substitute EPS-Systems
The energy demand of vehicles is influenced, not only by the drive systems, but also by a number of add-on systems. Electric vehicles must satisfy this energy demand completely from the battery. Hence, the use of power steering systems directly result in a range reduction. The “e2-Lenk” joint project funded by the German Federal Ministry of Education and Research (BMBF) involves a novel steering concept for electric vehicles to integrate the function of steering assistance into the drive-train. Specific distribution of driving torque at the steered axle allows the steering wheel torque to be influenced to support the steering force. This provides a potential for complete substitution of conventional power steering systems and reduces the vehicle’s energy demand. This paper shows the potential of wheel-individual drives influencing the driver’s steering torque using a control technique based on classical EPS control plans. Compared to conventional power-assisted steering systems, a reduced energy demand becomes evident over a wide range of operating conditions.
The loess landscapes of the Lower Rhine Embayment as (geo-)archeological archives – insights and challenges from a geomorphological and sedimentological perspective
Archeological and geoscientific research in loess landscapes remains challenging due to erosional discordances and the relocation of sediments by fluvial erosion and slope wash. The Lower Rhine Embayment (LRE) can serve as a blueprint for archeological and paleoenvironmental research in loess landscapes of Central Europe. The accumulation of wind-blown dust; paleosols developed therein; and the archeological artifacts preserved in loess, colluvial or alluvial sediments are evidence of the Pleistocene and Holocene dynamics of the landscape. Geomorphologic processes in different and specific relief positions must be considered different processes that transform and relocate sediments and archeological remains. Besides aeolian accumulation, erosion and deflation have also transformed the landscape of the LRE. These include fluvial slope wash, gully formation, colluviation, and periglacial processes such as solifluction, cryoturbation and the formation of ice wedge pseudomorphs. In addition, other post-depositional processes, including weathering and soil formation, modify the sedimentary record. In light of the landscape evolution from more hilly landscapes to the flat, agriculturally used terrain we see today, we highlight the relevance and importance of different geomorphological and soil processes including their impacts and challenges for archeological and geoscientific studies.
Bleeding disorders in implant dentistry: a narrative review and a treatment guide
Purpose Considering a high prevalence of congenital and especially acquired bleeding disorders, their heterogeneity and the multitude of possible treatments strategies, a review of the scientific data on this topic is needed to implement a treatment guide for healthcare professionals. Methods A selective literature review was performed via PubMed for articles describing oral surgery / dental implant procedures in patients with congenital and acquired bleeding disorders. Out of the existing literature, potential treatment algorithms were extrapolated. Results In order to assess the susceptibility to bleeding, risk stratification can be used for both congenital and acquired coagulation disorders. This risk stratification, together with an appropriate therapeutic pathway, allows for an adequate and individualized therapy for each patient. A central point is the close interdisciplinary cooperation with specialists. In addition to the discontinuation or replacement of existing treatment modalities, local hemostyptic measures are of primary importance. If local measures are not sufficient, systemically administered substances such as desmopressin and blood products have to be used. Conclusions Despite the limited evidence, a treatment guide could be developed by means of this narrative review to improve safety for patients and practitioners. Prospective randomized controlled trials are needed to allow the implementation of official evidence-based guidelines.
Optimizing an Osteosarcoma-Fibroblast Coculture Model to Study Antitumoral Activity of Magnesium-Based Biomaterials
Osteosarcoma is among the most common cancers in young patients and is responsible for one-tenth of all cancer-related deaths in children. Surgery often leads to bone defects in excised tissue, while residual cancer cells may remain. Degradable magnesium alloys get increasing attention as orthopedic implants, and some studies have reported potential antitumor activity. However, most of the studies do not take the complex interaction between malignant cells and their surrounding stroma into account. Here, we applied a coculture model consisting of green fluorescent osteosarcoma cells and red fluorescent fibroblasts on extruded Mg and Mg–6Ag with a tailored degradation rate. In contrast to non-degrading Ti-based material, both Mg-based materials reduced relative tumor cell numbers. Comparing the influence of the material on a sparse and dense coculture, relative cell numbers were found to be statistically different, thus relevant, while magnesium alloy degradations were observed as cell density-independent. We concluded that the sparse coculture model is a suitable mechanistic system to further study the antitumor effects of Mg-based material.
Dynamics and durability of HIV-1 neutralization are determined by viral replication
Human immunodeficiency virus type 1 (HIV-1)-neutralizing antibodies (nAbs) that prevent infection are the main goal of HIV vaccine discovery. But as no nAb-eliciting vaccines are yet available, only data from HIV-1 neutralizers—persons with HIV-1 who naturally develop broad and potent nAbs—can inform about the dynamics and durability of nAb responses in humans, knowledge which is crucial for the design of future HIV-1 vaccine regimens. To address this, we assessed HIV-1-neutralizing immunoglobulin G (IgG) from 2,354 persons with HIV-1 on or off antiretroviral therapy (ART). Infection with non-clade B viruses, CD4 + T cell counts <200 µl −1 , being off ART and a longer time off ART were independent predictors of a more potent and broad neutralization. In longitudinal analyses, we found nAb half-lives of 9.3 and 16.9 years in individuals with no- or low-level viremia, respectively, and 4.0 years in persons who newly initiated ART. Finally, in a potent HIV-1 neutralizer, we identified lower fractions of serum nAbs and of nAb-encoding memory B cells after ART initiation, suggesting that a decreasing neutralizing serum activity after antigen withdrawal is due to lower levels of nAbs. These results collectively show that HIV-1-neutralizing responses can persist for several years, even at low antigen levels, suggesting that an HIV-1 vaccine may elicit a durable nAb response. Human immunodeficiency virus type 1 (HIV-1)-neutralizing responses can persist for several years, even at low antigen levels, suggesting that an HIV-1 vaccine may be able to elicit a durable antibody response.