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Climate change scenarios predict that lake water temperatures will increase up to 4°C and rainfall events will become more intense and frequent by the end of this century. Concurrently, supply of humic substances from terrestrial runoff is expected to increase, resulting in darker watercolor (\"brownification\") of aquatic ecosystems. Using a multi-seasonal, low trophic state mesocosm experiment, we investigated how higher water temperature and brownification affect plankton community composition, phenology, and functioning. We tested the hypothesis that higher water temperature (+3°C) and brownification will, a) cause plankton community composition to shift toward small sized phytoplankton and cyanobacteria, and, b) extend the length of the growing season entailing higher phytoplankton production later in the season. We demonstrate that the 3°C increase of water temperature favored the growth of heterotrophic bacteria and small sized autotrophic picophytoplankton cells with significantly higher primary production during warmer fall periods. However, 3X darker water (effect of brownification) caused no significant changes in the plankton community composition or functioning relative to control conditions. Our findings reveal that increased temperature change plankton community structure by favoring smaller sized species proliferation (autotrophic phytoplankton and small size cladocerans), and increase primary productivity and community turnover. Finally, results of this multi-seasonal experiment suggest that warming by 3°C in aquatic ecosystems of low trophic state may cause planktonic food web functioning to become more dominated by fast growing, r-trait species (i.e., small sizes and rapid development).

Global climate change scenarios predict lake water temperatures to increase up to 4°C and extreme weather events, including heat waves and large temperature fluctuations, to occur more frequently. Such changes may result in a reorganization of the plankton community structure, causing shifts in diversity and structure toward a community dominated by fewer species that are more adapted to endure warmer and irregular temperature conditions. We designed a long‐term (8 months) mesocosm experiment to explore how ambient water temperature (C: control), induced increased temperature (T: +4°C), and temperature fluctuations (F: ±4°C relative to T) change phytoplankton phenology, taxonomical diversity, and community structure, and how such changes affected zooplankton abundance and composition. Synthesis. Our results show that T and F relative to C significantly decreased phytoplankton diversity. Moreover, there was a clear effect of the temperature treatments (T and F) on phytoplankton size structure that resulted in a significantly lower growth of large species (i.e., large Chlorophyta) compared to C. Decreased diversity and evenness in the T and F treatments pushed the community toward the dominance of only a few phytoplankton taxa (mainly Cyanobacteria and Chlorophyta) that are better adapted to endure warmer and more irregular temperature conditions. The observed shift toward Cyanobacteria dominance may affect trophic energy transfer along the aquatic food web. We designed a long‐term (8 months) mesocosm experiment to explore how climate change predicted scenarios as increased lake water temperature and large temperature fluctuations affect freshwater plankton communities abundance and composition. Our results showed decreased phytoplankton diversity and evenness in the temperature and temperature fluctuations treatments, and a shift of the community toward the dominance of only a few phytoplankton taxa (mainly Cyanobacteria and small Chlorophyta). The observed shift included dominance of filamentous and colonial cyanobacteria that are not readily edible and also constitute poor‐quality food for their consumers, which may affect trophic energy transfer along the aquatic food web.

Lakes are essential ecosystems that provide a large number of ecosystem services whose quality is strongly impacted by human pressures. Optimal uses of lakes require adapted magement practices which in turn rely on physico-chemical and biological monitoring. Long-term ecological monitoring provides large sets of environmental data. When such data are available, they have to be associated to metadata and to be stored properly to be accessible and useable by the scientific community. We present a data informatics system accessible to anyone who requests it. Maintained online since 2014 (https://si-ola.inrae.fr), it is origited from the Observatory on LAkes (OLA). It contains long-term data from 4 peri-alpine lakes (Lakes Aiguebelette, Annecy, Bourget, Geneva/Léman) and 24 high-altitude lakes of the northern French Alps. We describe the generated long-term data series, the data type, the methodologies and quality control procedures, and the information system where data are made accessible. Data use is allowed under the condition of providing reference to the origil source. We show here how such a platform clearly enhances data sharing and scientific collaboration. Various studies referring to these data are regularly published in peer-reviewed jourls; providing in fine a better understanding of lakes’ ecosystems functioning under local and global pressures.

Fungi are a highly complex group of organisms of the kingdom Eumycota (i.e. the true-fungi) and other fungus-like organisms traditionally studied by mycologists, such as slime molds (Myxomycota) and oomycota (Straminopiles or Heterokonts). They constitute a significant proportion of the as yet undiscovered biota that is crucial in ecological processes and human well-being, through at least three main trophic modes: saprophytism, parasitism, or symbiosis. In addition to direct benefit (sources of antibiotics) or adverse effects (agents of disease), fungi can impact many environmental processes, particularly those associated with the decomposition of organic matter. They are present in almost all regions and climates, even under extreme conditions. However, studies have focussed mostly on economically interesting species, and knowledge of their diversity and functions is mainly restricted to soil, rhizosphere, mangrove, and lotic ecosystems. In this study, we review the diversity and potential functions of microscopic fungi in aquatic ecosystems, with focus on the pelagic environments where they often are regarded as allochthonous material, of low ecological significance for food-web processes. Recent environmental 18S rDNA surveys of microbial eukaryotes have (1) unveiled a large reservoir of unexpected fungal diversity in pelagic systems, (2) emphasized their ecological potentials for ecosystem functioning, and (3) opened new perspectives in the context of food-web dynamics. In spite of persisting methodological difficulties, we conclude that a better documentation of the diversity and quantitative and functional importance of fungi will improve our understanding of pelagic processes and biogeochemical cycling.

This study is the first assessment of the quantitative impact of parasitic chytrids on a planktonic food web. We used a carbon-based food web model of Lake Pavin (Massif Central, France) to investigate the effects of chytrids during the spring diatom bloom by developing models with and without chytrids. Linear inverse modelling procedures were employed to estimate undetermined flows in the lake. The Monte Carlo Markov chain linear inverse modelling procedure provided estimates of the ranges of model-derived fluxes. Model results support recent theories on the probable impact of parasites on food web function. In the lake, during spring, when 'inedible' algae (unexploited by planktonic herbivores) were the dominant primary producers, the epidemic growth of chytrids significantly reduced the sedimentation loss of algal carbon to the detritus pool through the production of grazer-exploitable zoospores. We also review some theories about the potential influence of parasites on ecological network properties and argue that parasitism contributes to longer carbon path lengths, higher levels of activity and specialization, and lower recycling. Considering the \"structural asymmetry\" hypothesis as a stabilizing pattern, chytrids should contribute to the stability of aquatic food webs.

The fist hybrid meeting and workshop of the COST Action “Applications for zoosporic parasites in aquatic systems” was held from 4th to 7th of July 2022 at the Multifunctional Center for Social Activities and Welfare of the Larnaka Municipality in Larnaca, Cyprus. 22 participants from 11 countries and 15 institutions attended on site, 26 participants from 9 countries and 26 institutions attended online. The activities included presentations, open discussions and collaborative work.This report presents the results of the feedback survey send to participants after the event. The survey was anonymous and included multiple choice responses (checkboxes) and short answers to complete and provide arguments to the checkboxes answers. 16 surveys were collected from the 54 participants, 13 from onsite and 3 from virtual attendees. Based on feedbacks and comments from the participants, the report will also include some considerations on challenges and advantages of mixed events.The report will contribute to set-up an active network and effective communication strategy for ParAqua, by describing advantages and limitations of different settings based on the Action experience and provide tips and hints to foster collaboration and effective work in hybrid mode.

Abstract Covariation in species richness and community structure across taxonomical groups (cross‐taxon congruence) has practical consequences for the identification of biodiversity surrogates and proxies, as well as theoretical ramifications for understanding the mechanisms maintaining and sustaining biodiversity. We found there to exist a high cross‐taxon congruence between phytoplankton, zooplankton, and fish in 73 large Scandinavian lakes across a 750 km longitudinal transect. The fraction of the total diversity variation explained by local environment alone was small for all trophic levels while a substantial fraction could be explained by spatial gradient variables. Almost half of the explained variation could not be resolved between local and spatial factors, possibly due to confounding issues between longitude and landscape productivity. There is strong consensus that the longitudinal gradient found in the regional fish community results from postglacial dispersal limitations, while there is much less evidence for the species richness and community structure gradients at lower trophic levels being directly affected by dispersal limitation over the same time scale. We found strong support for bidirectional interactions between fish and zooplankton species richness, while corresponding interactions between phytoplankton and zooplankton richness were much weaker. Both the weakening of the linkage at lower trophic levels and the bidirectional nature of the interaction indicates that the underlying mechanism must be qualitatively different from a trophic cascade.

This corrects the article entitled “Daphnia magna fitness during low food supply under different water temperature and brownification scenarios\" by the authors Andrea Gall, Martin J. Kainz and Serena Rasconi, published with DOI 10.4081/jlimnol.2016.1450. The data on somatic growth rates reported in the results section, paragraph \"Life history traits\", page 165, were incorrect and the rectified data are presented. Figure 4 has also been corrected accordingly.

Much of our current knowledge about non-limiting dietary carbon supply for herbivorous zooplankton is based on experimental evidence and typically conducted at ~1 mg C L-1 and ~20°C. Here we ask how low supply of dietary carbon affects somatic growth, reproduction, and survival of Daphnia magna and test effects of higher water temperature (+3 °C relative to ambient) and brownification (3X higher than natural water color; both predicted effects of climate change) during fall cooling. We predicted that even at very low carbon supply (~5µg C L-1), higher water temperature and brownification will allow D. magna to increase its fitness. Neonates (<24 h old) were incubated with lake seston for 4 weeks (October-November 2013) in experimental bottles submerged in outdoor mesocosms to explore effects of warmer and darker water. Higher temperature and brownification did not significantly affect food quality, as assessed by its fatty acid composition. Daphnia exposed to both increased temperature and brownification had highest somatic growth and were the only that reproduced, and higher temperature caused the highest Daphnia survival success. These results suggest that even under low temperature and thus lower physiological activity, low food quantity is more important than its quality for D. magna fitness.

We analysed the long-term dynamics (1980-2007) of hypolimnetic and epilimnetic bacterial abundances and organic carbon concentrations, both dissolved (DOC) and particulate (POC), in the deep holo-oligomictic Lake Maggiore, included in the Southern Alpine Lakes Long-Term Ecological Research (LTER) site. During the 28 years of investigation, bacterial abundance and POC concentrations did not decrease with declining phosphorus concentrations, while DOC concentrations showed a pronounced decrease in the epi- and hypolimnion. We used the annual mean total lake heat content and total annual precipitation as climate-related variables, and in-lake total phosphorus as a proxy for trophic state. The model (forward stepwise regression, FSR) showed that reduced anthropogenic pressure was more significant than climate change in driving the trend in DOC concentrations. Bacterial dynamics in the hypolimnion mirrored the fluctuations observed in the epilimnion, but average cell abundance was three times lower. The FSR model indicates that bacterial number variability was dependent on POC in the epilimnion and DOC in the hypolimnion. In the hypolimnion, cell biovolumes for rod and coccal morphotypes were significantly larger than in the epilimnion.