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result(s) for
"Remsing, Richard C."
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Self-consistent determination of long-range electrostatics in neural network potentials
2022
Machine learning has the potential to revolutionize the field of molecular simulation through the development of efficient and accurate models of interatomic interactions. Neural networks can model interactions with the accuracy of quantum mechanics-based calculations, but with a fraction of the cost, enabling simulations of large systems over long timescales. However, implicit in the construction of neural network potentials is an assumption of locality, wherein atomic arrangements on the nanometer-scale are used to learn interatomic interactions. Because of this assumption, the resulting neural network models cannot describe long-range interactions that play critical roles in dielectric screening and chemical reactivity. Here, we address this issue by introducing the self-consistent field neural network — a general approach for learning the long-range response of molecular systems in neural network potentials that relies on a physically meaningful separation of the interatomic interactions — and demonstrate its utility by modeling liquid water with and without applied fields.
Machine learning-based neural network potentials often cannot describe long-range interactions. Here the authors present an approach for building neural network potentials that can describe the electronic and nuclear response of molecular systems to long-range electrostatics.
Journal Article
Ab initio theory and modeling of water
by
Chen, Mohan
,
Wu, Xifan
,
Car, Roberto
in
ab initio theory
,
catalysis (heterogeneous)
,
Chemistry
2017
Water is of the utmost importance for life and technology. However, a genuinely predictive ab initio model of water has eluded scientists. We demonstrate that a fully ab initio approach, relying on the strongly constrained and appropriately normed (SCAN) density functional, provides such a description of water. SCAN accurately describes the balance among covalent bonds, hydrogen bonds, and van der Waals interactions that dictates the structure and dynamics of liquid water. Notably, SCAN captures the density difference between water and ice Ih at ambient conditions, as well as many important structural, electronic, and dynamic properties of liquid water. These successful predictions of the versatile SCAN functional open the gates to study complex processes in aqueous phase chemistry and the interactions of water with other materials in an efficient, accurate, and predictive, ab initio manner.
Journal Article
Electronic paddle-wheels in a solid-state electrolyte
by
Somni, Rahul
,
Remsing, Richard C.
,
Dhattarwal, Harender S.
in
639/301/1034/1035
,
639/301/1034/1038
,
639/301/299/891
2024
Solid-state superionic conductors (SSICs) are promising alternatives to liquid electrolytes in batteries and other energy storage technologies. The rational design of SSICs and ultimately their deployment in battery technologies is hindered by the lack of a thorough understanding of their ion conduction mechanisms. In SSICs containing molecular ions, rotational dynamics couple with translational diffusion to create a paddle-wheel effect that facilitates conduction. The paddle-wheel mechanism explains many important features of molecular SSICs, but an explanation for ion conduction and anharmonic lattice dynamics in SSICs composed of monatomic ions is still needed. We predict that ion conduction in the classic SSIC AgI involves electronic paddle-wheels, rotational motion of localized electron pairs that couples to and facilitates ion diffusion. The electronic paddle-wheel mechanism creates a universal perspective for understanding ion conductivity in both monatomic and molecular SSICs that will create design principles for engineering solid-state electrolytes from the electronic level up to the macroscale.
Conduction in solid-state electrolytes composed of monatomic ions is found to be analogous to the paddle-wheel mechanism in molecular solid electrolytes, facilitated by rotational motion of lone pair electrons, helping unify understanding of mechanisms.
Journal Article
Long-ranged contributions to solvation free energies from theory and short-ranged models
by
Liu, Shule
,
Remsing, Richard C.
,
Weeks, John D.
in
Applied Physical Sciences
,
Hydrophobic surfaces
,
Physical Sciences
2016
Long-standing problems associated with long-ranged electrostatic interactions have plagued theory and simulation alike. Traditional lattice sum (Ewald-like) treatments of Coulomb interactions add significant overhead to computer simulations and can produce artifacts from spurious interactions between simulation cell images. These subtle issues become particularly apparent when estimating thermodynamic quantities, such as free energies of solvation in charged and polar systems, to which long-ranged Coulomb interactions typically make a large contribution. In this paper, we develop a framework for determining very accurate solvation free energies of systems with long-ranged interactions from models that interact with purely short-ranged potentials. Our approach is generally applicable and can be combined with existing computational and theoretical techniques for estimating solvation thermodynamics. We demonstrate the utility of our approach by examining the hydration thermodynamics of hydrophobic and ionic solutes and the solvation of a large, highly charged colloid that exhibits overcharging, a complex nonlinear electrostatic phenomenon whereby counterions from the solvent effectively overscreen and locally invert the integrated charge of the solvated object.
Journal Article
Pathways to dewetting in hydrophobic confinement
2015
Liquid water can become metastable with respect to its vapor in hydrophobic confinement. The resulting dewetting transitions are often impeded by large kinetic barriers. According to macroscopic theory, such barriers arise from the free energy required to nucleate a critical vapor tube that spans the region between two hydrophobic surfacesâtubes with smaller radii collapse, whereas larger ones grow to dry the entire confined region. Using extensive molecular simulations of water between two nanoscopic hydrophobic surfaces, in conjunction with advanced sampling techniques, here we show that for intersurface separations that thermodynamically favor dewetting, the barrier to dewetting does not correspond to the formation of a (classical) critical vapor tube. Instead, it corresponds to an abrupt transition from an isolated cavity adjacent to one of the confining surfaces to a gap-spanning vapor tube that is already larger than the critical vapor tube anticipated by macroscopic theory. Correspondingly, the barrier to dewetting is also smaller than the classical expectation. We show that the peculiar nature of water density fluctuations adjacent to extended hydrophobic surfacesânamely, the enhanced likelihood of observing low-density fluctuations relative to Gaussian statisticsâfacilitates this nonclassical behavior. By stabilizing isolated cavities relative to vapor tubes, enhanced water density fluctuations thus stabilize novel pathways, which circumvent the classical barriers and offer diminished resistance to dewetting. Our results thus suggest a key role for fluctuations in speeding up the kinetics of numerous phenomena ranging from CassieâWenzel transitions on superhydrophobic surfaces, to hydrophobically driven biomolecular folding and assembly.
Journal Article
Ion-dependent protein–surface interactions from intrinsic solvent response
by
Baker, David
,
Tezcan, F. Akif
,
Prelesnik, Jesse L.
in
Aluminum Silicates - chemistry
,
Applied Physical Sciences
,
Aqueous solutions
2021
The phyllosilicate mineral muscovite mica is widely used as a surface template for the patterning of macromolecules, yet a molecular understanding of its surface chemistry under varying solution conditions, required to predict and control the self-assembly of adsorbed species, is lacking. We utilize all-atom molecular dynamics simulations in conjunction with an electrostatic analysis based in local molecular field theory that affords a clean separation of long-range and short-range electrostatics. Using water polarization response as a measure of the electric fields that arise from patterned, surface-bound ions that direct the adsorption of charged macromolecules, we apply a Landau theory of forces induced by asymmetrically polarized surfaces to compute protein–surface interactions for two muscovite-binding proteins (DHR10-mica6 and C98RhuA). Comparison of the pressure between surface and protein in high-concentration KCl and NaCl aqueous solutions reveals ion-specific differences in far-field protein–surface interactions, neatly capturing the ability of ions to modulate the surface charge of muscovite that in turn selectively attracts one binding face of each protein over all others.
Journal Article
Intrusion and extrusion of liquids in highly confining media: bridging fundamental research to applications
by
Grosu, Yaroslav
,
Roth, Roland
,
Kashyap, Hemant K.
in
Chemistry
,
Chromatography
,
Compressibility
2022
Wetting and drying of pores or cavities, made by walls that attract or repel the liquid, is a ubiquitous process in nature and has many technological applications including, for example, liquid separation, chromatography, energy damping, conversion, and storage. Understanding under which conditions intrusion/extrusion takes place and how to control/tune them by chemical or physical means are currently among the main questions in the field. Historically, the theory to model intrusion/extrusion was based on the mechanics of fluids. However, the discovery of the existence of metastable states, where systems are kinetically trapped in the intruded or extruded configuration, fostered the research based on modern statistical mechanics concepts and more accurate models of the liquid, vapor, and gas phases beyond the simplest sharp interface representation. In parallel, inspired by the growing number of technological applications of intrusion/extrusion, experimental research blossomed considering systems with complex chemistry and pore topology, possessing flexible frameworks, and presenting unusual properties, such as negative volumetric compressibility. In this article, we review recent theoretical and experimental progresses, presenting it in the context of unifying framework. We illustrate also emerging technological applications of intrusion/extrusion and discuss challenges ahead.
Journal Article
Accurate first-principles structures and energies of diversely bonded systems from an efficient density functional
by
Ruzsinszky, Adrienn
,
Wu, Xifan
,
Waghmare, Umesh
in
639/638/298/917
,
639/638/563/606
,
639/638/563/979
2016
One atom or molecule binds to another through various types of bond, the strengths of which range from several meV to several eV. Although some computational methods can provide accurate descriptions of all bond types, those methods are not efficient enough for many studies (for example, large systems,
ab initio
molecular dynamics and high-throughput searches for functional materials). Here, we show that the recently developed non-empirical strongly constrained and appropriately normed (SCAN) meta-generalized gradient approximation (meta-GGA) within the density functional theory framework predicts accurate geometries and energies of diversely bonded molecules and materials (including covalent, metallic, ionic, hydrogen and van der Waals bonds). This represents a significant improvement at comparable efficiency over its predecessors, the GGAs that currently dominate materials computation. Often, SCAN matches or improves on the accuracy of a computationally expensive hybrid functional, at almost-GGA cost. SCAN is therefore expected to have a broad impact on chemistry and materials science.
Whether a molecule or material can exist, and with what structures and energies, is of critical importance. For demanding calculations the efficiency of density functional theory makes it the only practical electronic structure theory available to help answer these questions. Now, an efficient density functional is shown to have unprecedented accuracy for a diverse set of bonded systems.
Journal Article
Octahedral tilting and B-site off-centering in halide perovskites are not coupled
Metal halide perovskites show exceptional potential for solar energy, thermoelectrics, catalysis, and other photochemical technologies, with performance rooted in electronic structure-driven properties. In ABX
halide perovskites, localized and often aspherical local electron densities from B-site lone pairs or polarizable X
anions can distort the lattice. However, the links among electronic structure fluctuations and distortions like tilting of the BX
octahedra and off-centering of the B-site from the center of its octahedron are not fully understood. Using group theory and ab initio molecular dynamics, we quantify how lone pairs, halide polarization, off-centering, and octahedral tilting interact in the cubic phase CsBBr
, with B = Pb, Sn, and Ge. We find that lone pair-induced off-centering and octahedral tilting are symmetry-decoupled. Instead, stereochemical lone pair expression of the B-site ion is correlated to octahedral tilting through the propensity of the B-site to form a transient, partial covalent bond with the surrounding halide ions that stiffens octahedral tilting modes. These results link local electronic asymmetry to structural fluctuations and suggest that dynamic modulation of electronic symmetry offers a pathway to control functional properties in halide perovskites.
Journal Article