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3,399 result(s) for "Ritchie, D"
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Genetics of height and risk of atrial fibrillation: A Mendelian randomization study
Observational studies have identified height as a strong risk factor for atrial fibrillation, but this finding may be limited by residual confounding. We aimed to examine genetic variation in height within the Mendelian randomization (MR) framework to determine whether height has a causal effect on risk of atrial fibrillation. In summary-level analyses, MR was performed using summary statistics from genome-wide association studies of height (GIANT/UK Biobank; 693,529 individuals) and atrial fibrillation (AFGen; 65,446 cases and 522,744 controls), finding that each 1-SD increase in genetically predicted height increased the odds of atrial fibrillation (odds ratio [OR] 1.34; 95% CI 1.29 to 1.40; p = 5 × 10-42). This result remained consistent in sensitivity analyses with MR methods that make different assumptions about the presence of pleiotropy, and when accounting for the effects of traditional cardiovascular risk factors on atrial fibrillation. Individual-level phenome-wide association studies of height and a height genetic risk score were performed among 6,567 European-ancestry participants of the Penn Medicine Biobank (median age at enrollment 63 years, interquartile range 55-72; 38% female; recruitment 2008-2015), confirming prior observational associations between height and atrial fibrillation. Individual-level MR confirmed that each 1-SD increase in height increased the odds of atrial fibrillation, including adjustment for clinical and echocardiographic confounders (OR 1.89; 95% CI 1.50 to 2.40; p = 0.007). The main limitations of this study include potential bias from pleiotropic effects of genetic variants, and lack of generalizability of individual-level findings to non-European populations. In this study, we observed evidence that height is likely a positive causal risk factor for atrial fibrillation. Further study is needed to determine whether risk prediction tools including height or anthropometric risk factors can be used to improve screening and primary prevention of atrial fibrillation, and whether biological pathways involved in height may offer new targets for treatment of atrial fibrillation.
Overshooting tipping point thresholds in a changing climate
Palaeorecords suggest that the climate system has tipping points, where small changes in forcing cause substantial and irreversible alteration to Earth system components called tipping elements. As atmospheric greenhouse gas concentrations continue to rise as a result of fossil fuel burning, human activity could also trigger tipping, and the impacts would be difficult to adapt to. Previous studies report low global warming thresholds above pre-industrial conditions for key tipping elements such as ice-sheet melt. If so, high contemporary rates of warming imply that exceeding these thresholds is almost inevitable, which is widely assumed to mean that we are now committed to suffering these tipping events. Here we show that this assumption may be flawed, especially for slow-onset tipping elements (such as the collapse of the Atlantic Meridional Overturning Circulation) in our rapidly changing climate. Recently developed theory indicates that a threshold may be temporarily exceeded without prompting a change of system state, if the overshoot time is short compared to the effective timescale of the tipping element. To demonstrate this, we consider transparently simple models of tipping elements with prescribed thresholds, driven by global warming trajectories that peak before returning to stabilize at a global warming level of 1.5 degrees Celsius above the pre-industrial level. These results highlight the importance of accounting for timescales when assessing risks associated with overshooting tipping point thresholds. Ongoing global warming is likely to cause tipping point thresholds to be passed, but an abrupt system change can still be avoided if the warming is reversed quickly relative to the timescale of the tipping element.
Methods of integrating data to uncover genotype–phenotype interactions
Key Points Technological advances have vastly expanded the amount of omic data currently available. Historically, each type of data was analysed separately, although approaches to integrate omic data sets to predict complex phenotypic traits are now emerging. Such systems genomics approaches to combine multiple data types provide a more comprehensive understanding of complex genotype–phenotype associations than analysis of one data set. Data from multiple sources that point to the association of the same gene or pathway are less likely to result in false positives. There are various strengths and weaknesses of the available strategies. The approach used needs to be selected according to specific types of data, different types of scientific questions or different types of underlying genomic models. Integrating multiple data types can be substantially more informative than analysing data sets separately, and methods to combine data sets are now emerging. This Review outlines the current approaches for data integration and the various strengths and weaknesses of these strategies. The analytical challenges that emerge with data sets of this magnitude are also described, and the authors provide their perspective on how such systems genomic analyses might develop in the future. Recent technological advances have expanded the breadth of available omic data, from whole-genome sequencing data, to extensive transcriptomic, methylomic and metabolomic data. A key goal of analyses of these data is the identification of effective models that predict phenotypic traits and outcomes, elucidating important biomarkers and generating important insights into the genetic underpinnings of the heritability of complex traits. There is still a need for powerful and advanced analysis strategies to fully harness the utility of these comprehensive high-throughput data, identifying true associations and reducing the number of false associations. In this Review, we explore the emerging approaches for data integration — including meta-dimensional and multi-staged analyses — which aim to deepen our understanding of the role of genetics and genomics in complex outcomes. With the use and further development of these approaches, an improved understanding of the relationship between genomic variation and human phenotypes may be revealed.
Two-particle time-domain interferometry in the fractional quantum Hall effect regime
Quasi-particles are elementary excitations of condensed matter quantum phases. Demonstrating that they keep quantum coherence while propagating is a fundamental issue for their manipulation for quantum information tasks. Here, we consider anyons, the fractionally charged quasi-particles of the Fractional Quantum Hall Effect occurring in two-dimensional electronic conductors in high magnetic fields. They obey anyonic statistics, intermediate between fermionic and bosonic. Surprisingly, anyons show large quantum coherence when transmitted through the localized states of electronic Fabry-Pérot interferometers, but almost no quantum interference when transmitted via the propagating states of Mach-Zehnder interferometers. Here, using a novel interferometric approach, we demonstrate that anyons do keep quantum coherence while propagating. Performing two-particle time-domain interference measurements sensitive to the two-particle Hanbury Brown Twiss phase, we find 53 and 60% visibilities for anyons with charges e/5 and e/3. Our results give a positive message for the challenge of performing controlled quantum coherent braiding of anyons. Excitations of the fractional quantum Hall states are of great interest because they obey anyonic statistics, but electronic interferometers give contrasting results about their quantum coherence. Here the authors use novel two-particle time-domain interferometry to show that quantum coherence is indeed preserved.
First-dose ChAdOx1 and BNT162b2 COVID-19 vaccines and thrombocytopenic, thromboembolic and hemorrhagic events in Scotland
Reports of ChAdOx1 vaccine–associated thrombocytopenia and vascular adverse events have led to some countries restricting its use. Using a national prospective cohort, we estimated associations between exposure to first-dose ChAdOx1 or BNT162b2 vaccination and hematological and vascular adverse events using a nested incident-matched case-control study and a confirmatory self-controlled case series (SCCS) analysis. An association was found between ChAdOx1 vaccination and idiopathic thrombocytopenic purpura (ITP) (0–27 d after vaccination; adjusted rate ratio (aRR) = 5.77, 95% confidence interval (CI), 2.41–13.83), with an estimated incidence of 1.13 (0.62–1.63) cases per 100,000 doses. An SCCS analysis confirmed that this was unlikely due to bias (RR = 1.98 (1.29–3.02)). There was also an increased risk for arterial thromboembolic events (aRR = 1.22, 1.12–1.34) 0–27 d after vaccination, with an SCCS RR of 0.97 (0.93–1.02). For hemorrhagic events 0–27 d after vaccination, the aRR was 1.48 (1.12–1.96), with an SCCS RR of 0.95 (0.82–1.11). A first dose of ChAdOx1 was found to be associated with small increased risks of ITP, with suggestive evidence of an increased risk of arterial thromboembolic and hemorrhagic events. The attenuation of effect found in the SCCS analysis means that there is the potential for overestimation of the reported results, which might indicate the presence of some residual confounding or confounding by indication. Public health authorities should inform their jurisdictions of these relatively small increased risks associated with ChAdOx1. No positive associations were seen between BNT162b2 and thrombocytopenic, thromboembolic and hemorrhagic events. New data from the EAVE II cohort in Scotland suggests that a first dose of the ChAdOx1 nCoV-19 vaccine might be associated with a small increase in the risk of idiopathic thrombocytopenic purpura between 0 and 27 d after vaccination.
Spin-photon entanglement with direct photon emission in the telecom C-band
Quantum networks, relying on the distribution of quantum entanglement between remote locations, have the potential to transform quantum computation and secure long-distance quantum communication. However, a fundamental ingredient for fibre-based implementations of such networks, namely entanglement between a single spin and a photon directly emitted at telecom wavelengths, has been unattainable so far. Here, we use a negatively charged exciton in an InAs/InP quantum dot to implement an optically active spin qubit taking advantage of the lowest-loss transmission window, the telecom C-band. We investigate the coherent interactions of the spin-qubit system under resonant excitation, demonstrating high fidelity spin initialisation and coherent control using picosecond pulses. We further use these tools to measure the coherence of a single, undisturbed electron spin in our system. Finally, we demonstrate spin-photon entanglement in a solid-state system with entanglement fidelity F  = 80.07 ± 2.9%, more than 10 standard deviations above the classical limit. Quantum communication networks would greatly benefit from the possibility to have solid-state emitters being directly interfaced with telecom fibers, without the need for wavelength conversion. Here, the authors demonstrate coherent control of an InAs/InP quantum dot, as well as entanglement between its electron spin and the frequency of a telecom photon.
Electronic health records and polygenic risk scores for predicting disease risk
Accurate prediction of disease risk based on the genetic make-up of an individual is essential for effective prevention and personalized treatment. Nevertheless, to date, individual genetic variants from genome-wide association studies have achieved only moderate prediction of disease risk. The aggregation of genetic variants under a polygenic model shows promising improvements in prediction accuracies. Increasingly, electronic health records (EHRs) are being linked to patient genetic data in biobanks, which provides new opportunities for developing and applying polygenic risk scores in the clinic, to systematically examine and evaluate patient susceptibilities to disease. However, the heterogeneous nature of EHR data brings forth many practical challenges along every step of designing and implementing risk prediction strategies. In this Review, we present the unique considerations for using genotype and phenotype data from biobank-linked EHRs for polygenic risk prediction.Electronic health records (EHRs) linked to biobanks provide new opportunities for developing and applying polygenic risk scores in the clinic. The authors review the opportunities and challenges that arise when using EHR data for the systematic evaluation of patient disease susceptibilities.
Coherent light scattering from a telecom C-band quantum dot
Quantum networks have the potential to transform secure communication via quantum key distribution and enable novel concepts in distributed quantum computing and sensing. Coherent quantum light generation at telecom wavelengths is fundamental for fibre-based network implementations, but Fourier-limited emission and subnatural linewidth photons have so far only been reported from systems operating in the visible to near-infrared wavelength range. Here, we use InAs/InP quantum dots to demonstrate photons with coherence times much longer than the Fourier limit at telecom wavelength via elastic scattering of excitation laser photons. Further, we show that even the inelastically scattered photons have coherence times within the error bars of the Fourier limit. Finally, we make direct use of the minimal attenuation in fibre for these photons by measuring two-photon interference after 25 km of fibre, demonstrating finite interference visibility for photons emitted about 100,000 excitation cycles apart. Developing quantum networks would require reliable sources of coherent quantum light at telecom wavelengths. Here, the authors employ elastic scattering of excitation laser photons on InAs/InP quantum dots to demonstrate the emission of telecom photons with coherence times longer than the Fourier limit.
Global warming overshoots increase risks of climate tipping cascades in a network model
Current policies and actions make it very likely, at least temporarily, to overshoot the Paris climate targets of 1.5–<2.0 °C above pre-industrial levels. If this global warming range is exceeded, potential tipping elements such as the Greenland Ice Sheet and Amazon rainforest may be at increasing risk of crossing critical thresholds. This raises the question of how much this risk is amplified by increasing overshoot magnitude and duration. Here we investigate the danger for tipping under a range of temperature overshoot scenarios using a stylized network model of four interacting climate tipping elements. Our model analysis reveals that temporary overshoots can increase tipping risks by up to 72% compared with non-overshoot scenarios, even when the long-term equilibrium temperature stabilizes within the Paris range. Our results suggest that avoiding high-end climate risks is possible only for low-temperature overshoots and if long-term temperatures stabilize at or below today’s levels of global warming.Temporarily exceeding temperature targets could increase risk of crossing tipping-element thresholds. This study considers a range of overshoot scenarios in a stylized network model and shows that overshoots increase tipping risks by up to 72% compared with remaining within targets.
A Josephson relation for fractionally charged anyons
Anyons occur in two-dimensional electron systems as excitations with fractional charge in the topologically ordered states of the fractional quantum Hall effect (FQHE). Their dynamics are of utmost importance for topological quantum phases and possible decoherence-free quantum information approaches, but observing these dynamics experimentally is challenging. Here, we report on a dynamical property of anyons: the long-predicted Josephson relation f J = e*V/h for charges e* = e/3 and e/5, where e is the charge of the electron and h is Planck’s constant. The relation manifests itself as marked signatures in the dependence of photo-assisted shot noise (PASN) on voltage V when irradiating contacts at microwaves frequency f J. The validation of FQHE PASN models indicates a path toward realizing time-resolved anyon sources based on levitons.