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Event-Based Surveillance (EBS) tools, such as HealthMap and PADI-web, monitor online news reports and other unofficial sources, with the primary aim to provide timely information to users from health agencies on disease outbreaks occurring worldwide. In this work, we describe how outbreak-related information disseminates from a primary source, via a secondary source, to a definitive aggregator, an EBS tool, during the 2018/19 avian influenza season. We analysed 337 news items from the PADI-web and 115 news articles from HealthMap EBS tools reporting avian influenza outbreaks in birds worldwide between July 2018 and June 2019. We used the sources cited in the news to trace the path of each outbreak. We built a directed network with nodes representing the sources (characterised by type, specialisation, and geographical focus) and edges representing the flow of information. We calculated the degree as a centrality measure to determine the importance of the nodes in information dissemination. We analysed the role of the sources in early detection (detection of an event before its official notification) to the World Organisation for Animal Health (WOAH) and late detection. A total of 23% and 43% of the avian influenza outbreaks detected by the PADI-web and HealthMap, respectively, were shared on time before their notification. For both tools, national and local veterinary authorities were the primary sources of early detection. The early detection component mainly relied on the dissemination of nationally acknowledged events by online news and press agencies, bypassing international reporting to the WAOH. WOAH was the major secondary source for late detection, occupying a central position between national authorities and disseminator sources, such as online news. PADI-web and HealthMap were highly complementary in terms of detected sources, explaining why 90% of the events were detected by only one of the tools. We show that current EBS tools can provide timely outbreak-related information and priority news sources to improve digital disease surveillance.

Since 2013, the French Animal Health Epidemic Intelligence System (in French: Veille Sanitaire Internationale, VSI) has been monitoring signals of the emergence of new and exotic animal infectious diseases worldwide. Once detected, the VSI team verifies the signals and issues early warning reports to French animal health authorities when potential threats to France are detected. To improve detection of signals from online news sources, we designed the Platform for Automated extraction of Disease Information from the web (PADI-web). PADI-web automatically collects, processes and extracts English-language epidemiological information from Google News. The core component of PADI-web is a combined information extraction (IE) method founded on rule-based systems and data mining techniques. The IE approach allows extraction of key information on diseases, locations, dates, hosts and the number of cases mentioned in the news. We evaluated the combined method for IE on a dataset of 352 disease-related news reports mentioning the diseases involved, locations, dates, hosts and the number of cases. The combined method for IE accurately identified (F-score) 95% of the diseases and hosts, respectively, 85% of the number of cases, 83% of dates and 80% of locations from the disease-related news. We assessed the sensitivity of PADI-web to detect primary outbreaks of four emerging animal infectious diseases notifiable to the World Organisation for Animal Health (OIE). From January to June 2016, PADI-web detected signals for 64% of all primary outbreaks of African swine fever, 53% of avian influenza, 25% of bluetongue and 19% of foot-and-mouth disease. PADI-web timely detected primary outbreaks of avian influenza and foot-and-mouth disease in Asia, i.e. they were detected 8 and 3 days before immediate notification to OIE, respectively.

Land artificialization is a serious problem of civilization. Urban planning and natural risk management are aimed to improve it. In France, these practices operate the Local Land Plans (PLU – Plan Local d’Urbanisme) and the Natural risk prevention plans (PPRn – Plan de Prévention des Risques naturels) containing land use rules. To facilitate automatic extraction of the rules, we manually annotated a number of those documents concerning Montpellier, a rapidly evolving agglomeration exposed to natural risks. We defined a format for labeled examples in which each entry includes title and subtitle. In addition, we proposed a hierarchical representation of class labels to generalize the use of our corpus. Our corpus, consisting of 1934 textual segments, each of which labeled by one of the 4 classes (Verifiable, Non-verifiable, Informative and Not pertinent) is the first corpus in the French language in the fields of urban planning and natural risk management. Along with presenting the corpus, we tested a state-of-the-art approach for text classification to demonstrate its usability for automatic rule extraction.

This position paper presents a comparative study of co-occurrences. Some similarities and differences in the definition exist depending on the research domain (e.g. linguistics, NLP, computer science). This paper discusses these points, and deals with the methodological aspects in order to identify co-occurrences in a multidisciplinary paradigm.

Background The timely and accurate identification of food insecurity situations represents a challenging issue. Household surveys are routinely used in low-income countries and are an essential tool for obtaining key food security indicators that are used by decision makers to determine the targets of food security interventions. Methodology This paper investigates the spatial and temporal quality of the food security indicators obtained through household surveys. The empirical case of Burkina Faso is used in this paper, where a large-scale rural household survey has been conducted yearly since 2009. From this data set, three food security indicators (the Food Consumption Score, the Household Dietary Diversity Score and the Coping Strategies Index) are calculated at the regional level for each year during the 2009–2017 period. Results Results highlight that observed spatiotemporal variations in these indicators are consistent with the major regional food shocks reported in food warning system reports and are significantly correlated with variations computed from other sources of data, such as satellite images, rainfall and food prices. Conclusion These results raise new research questions on food security monitoring systems and on the use of heterogeneous data and multiple food security indicators.

Event-based surveillance (EBS) gathers information from a variety of data sources, including online news articles. Unlike the data from formal reporting, the EBS data are not structured, and their interpretation can overwhelm epidemic intelligence (EI) capacities in terms of available human resources. Therefore, diverse EBS systems that automatically process (all or part of) the acquired nonstructured data from online news articles have been developed. These EBS systems (e.g., GPHIN, HealthMap, MedISys, ProMED, PADI-web) can use annotated data to improve the surveillance systems. This paper describes a framework for the annotation of epidemiological information in animal disease-related news articles. We provide annotation guidelines that are generic and applicable to both animal and zoonotic infectious diseases, regardless of the pathogen involved or its mode of transmission (e.g., vector-borne, airborne, by contact). The framework relies on the successive annotation of all the sentences from a news article. The annotator evaluates the sentences in a specific epidemiological context, corresponding to the publication date of the news article.Measurement(s) Precision/Recall • Annotator aggreementTechnology Type(s)Expert annotation • Kappa’s coefficient • Natural Language ProcessingSample Characteristic - OrganismAnimal • African swine fever virus • Avian influenza • Foot-and-mouth disease virus • Bluetongue virus • Bovine spongiform encephalopathySample Characteristic - EnvironmentAnimal infectious diseases

Elongated words such as “Wiiiiiin” or “allloooo” are common in oral communication and are often used to emphasize or exaggerate the hidden message of the root word. While elongated words are rarely found in written languages and dictionaries, they are prevalent in social media networks. Considering elongation in sentiment analysis can provide valuable insights into user sentiments. In this article, we analyze the impact of elongation on sentiment classification, along with an in-depth study of lexical forms of elongation. We propose a method to enhance sentiment classification accuracy by incorporating elongation-based features using BERT (bidirectional encoder representations from transformers) approaches. Experimental results conducted on Twitter data demonstrate that our model achieves an average accuracy of 87% through 10-fold cross-validation experiments.

Online news sources are popular resources for learning about current health situations and developing event-based surveillance (EBS) systems. However, having access to diverse information originating from multiple sources can misinform stakeholders, eventually leading to false health risks. The existing literature contains several techniques for performing data quality evaluation to minimize the effects of misleading information. We mainly proposed three approaches to assess the quality of news sources. In our research, our primary focus was on ensuring data quality assessment at two levels: 1) News article level and 2) News source level. We explored data quality assessment at the news article level through two main approaches: 1) Data-driven score-based approach and 2) Metadata-based machine learning (ML) approach. The data-driven score-based approach aims to classify relevant and irrelevant news articles, adding an explainability aspect in the context of EBS. Similarly, the metadata approach is employed for classification, utilizing news article metadata features in ML models to highlight important metadata features. For source-level quality assessment, we identified exogenous metadata attributes such as source categorization and geographical coverage associated with news sources, extracting this information automatically. With the help of extracted source metadata, we conducted the classification of news sources. The obtained results hold significance in terms of prioritizing news sources within the context of EBS. Nevertheless, further investigation is required to enhance the methodology of this approach.

Food Security (FS) is a major concern in West Africa, particularly in Burkina Faso, which has been the epicenter of a humanitarian crisis since the beginning of this century. Early warning systems for FS and famines rely mainly on numerical data for their analyses, whereas textual data, which are more complex to process, are rarely used. However, this data is easy to access and represents a source of relevant information that is complementary to commonly used data sources. This study explores methods for obtaining the explanatory context associated with FS from textual data. Based on a corpus of local newspaper articles, we analyze FS over the last ten years in Burkina Faso. We propose an original and dedicated pipeline that combines different textual analysis approaches to obtain an explanatory model evaluated on real-world and large-scale data. The results of our analyses have proven how our approach provides significant results that offer distinct and complementary qualitative information on food security and its spatial and temporal characteristics.