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The deep sea, the largest ecosystem on Earth and one of the least studied, harbours high biodiversity and provides a wealth of resources. Although humans have used the oceans for millennia, technological developments now allow exploitation of fisheries resources, hydrocarbons and minerals below 2000 m depth. The remoteness of the deep seafloor has promoted the disposal of residues and litter. Ocean acidification and climate change now bring a new dimension of global effects. Thus the challenges facing the deep sea are large and accelerating, providing a new imperative for the science community, industry and national and international organizations to work together to develop successful exploitation management and conservation of the deep-sea ecosystem. This paper provides scientific expert judgement and a semi-quantitative analysis of past, present and future impacts of human-related activities on global deep-sea habitats within three categories: disposal, exploitation and climate change. The analysis is the result of a Census of Marine Life--SYNDEEP workshop (September 2008). A detailed review of known impacts and their effects is provided. The analysis shows how, in recent decades, the most significant anthropogenic activities that affect the deep sea have evolved from mainly disposal (past) to exploitation (present). We predict that from now and into the future, increases in atmospheric CO(2) and facets and consequences of climate change will have the most impact on deep-sea habitats and their fauna. Synergies between different anthropogenic pressures and associated effects are discussed, indicating that most synergies are related to increased atmospheric CO(2) and climate change effects. We identify deep-sea ecosystems we believe are at higher risk from human impacts in the near future: benthic communities on sedimentary upper slopes, cold-water corals, canyon benthic communities and seamount pelagic and benthic communities. We finalise this review with a short discussion on protection and management methods.

No fish have been found in the deepest 25% of the ocean (8,400—11,000 m). This apparent absence has been attributed to hydrostatic pressure, although direct evidence is wanting because of the lack of deepest-living species to study. The common osmolyte trimethylamine N-oxide (TMAO) stabilizes proteins against pressure and increases with depth, going from 40 to 261 mmol/kg in teleost fishes from 0 to 4,850 m. TMAO accumulation with depth results in increasing internal osmolality (typically 350 mOsmol/kg in shallow species compared with seawater's 1,100 mOsmol/kg). Preliminary extrapolation of osmolalities of predicted isosmotic state at 8,000—8,500 m may indicate a possible physiological limit, as greater depths would require reversal of osmotic gradients and, thus, osmoregulatory systems. We tested this prediction by capturing five of the second-deepest known fish, the hadal snailfish (Notoliparis kermadecensis; Liparidae), from 7,000 m in the Kermadec Trench. We found their muscles to have a TMAO content of 386 ± 18 mmol/kg and osmolality of 991 ± 22 mOsmol/kg. These data fit previous extrapolations and, combined with new osmolalities from bathyal and abyssal fishes, predict isosmotic state at 8,200 m. This is previously unidentified evidence that biochemistry could constrain the depth of a large, complex taxonomic group.

The impacts of large terrestrial volcanic eruptions are apparent from satellite monitoring and direct observations. However, more than three quarters of all volcanic outputs worldwide lie submerged beneath the ocean, and the risks they pose to people, infrastructure, and benthic ecosystems remain poorly understood due to inaccessibility and a lack of detailed observations before and after eruptions. Here, comparing data acquired between 2015 - 2017 and 3 months after the January 2022 eruption of Hunga Volcano, we document the far-reaching and diverse impacts of one of the most explosive volcanic eruptions ever recorded. Almost 10 km 3 of seafloor material was removed during the eruption, most of which we conclude was redeposited within 20 km of the caldera by long run-out seafloor density currents. These powerful currents damaged seafloor cables over a length of >100 km, reshaped the seafloor, and caused mass-mortality of seafloor life. Biological (mega-epifaunal invertebrate) seafloor communities only survived the eruption where local topography provided a physical barrier to density currents (e.g., on nearby seamounts). While the longer-term consequences of such a large eruption for human, ecological and climatic systems are emerging, we expect that these previously-undocumented refugia will play a key role in longer-term ecosystem recovery. During the 2022 Hunga Volcano eruption, 10 km 3 of seafloor material was removed, fueling long-run out seafloor density currents. These powerful currents damaged seafloor cables over a length of >100 km, reshaped the seafloor, and caused mass-mortality of seafloor life.

Submarine canyons are dramatic and widespread topographic features crossing continental and island margins in all oceans. Canyons can be sites of enhanced organic-matter flux and deposition through entrainment of coastal detrital export, dense shelf-water cascade, channelling of resuspended particulate material and focusing of sediment deposition. Despite their unusual ecological characteristics and global distribution along oceanic continental margins, only scattered information is available about the influence of submarine canyons on deep-sea ecosystem structure and productivity. Here, we show that deep-sea canyons such as the Kaikoura Canyon on the eastern New Zealand margin (42°01′ S, 173°03′ E) can sustain enormous biomasses of infaunal megabenthic invertebrates over large areas. Our reported biomass values are 100-fold higher than those previously reported for deep-sea (non-chemosynthetic) habitats below 500 m in the ocean. We also present evidence from deep-sea-towed camera images that areas in the canyon that have the extraordinary benthic biomass also harbour high abundances of macrourid (rattail) fishes likely to be feeding on the macro- and megabenthos. Bottom-trawl catch data also indicate that the Kaikoura Canyon has dramatically higher abundances of benthic-feeding fishes than adjacent slopes. Our results demonstrate that the Kaikoura Canyon is one of the most productive habitats described so far in the deep sea. A new global inventory suggests there are at least 660 submarine canyons worldwide, approximately 100 of which could be biomass hotspots similar to the Kaikoura Canyon. The importance of such deep-sea canyons as potential hotspots of production and commercial fisheries yields merits substantial further study.

Hydroxylated isoprenoid glycerol dialkyl glycerol tetraethers (OH‐GDGTs) preserved in marine sediments are thought to be controlled by sea surface temperature (SST). However, water depth may also exert a significant influence on OH‐GDGTs. Here, we investigated sedimentary OH‐GDGTs in the Kermadec and Atacama trench regions (2,560–9,560 m water depth). Sedimentary OH‐GDGTs in hadal trenches were dominated by OH‐GDGT‐0 (72 ± 8%), potentially reflecting an adaption of source organisms to ambient cold deep water. This result, combined with global data set, revealed that the predominance of OH‐GDGT‐0 is a ubiquitous phenomenon in deep‐sea sediments, leading to a considerable underestimation of RI‐OH′‐derived SSTs. By considering both SST and water depth effects, we developed more accurate OH‐GDGT‐based paleothermometers for both shallow regions and the global ocean, encompassing the full‐ocean‐depth range. Our findings highlight the importance of accounting for the effect of water depth on OH‐GDGTs and provide improved tools for reconstructing paleo‐SSTs. Plain Language Summary Building quantitative proxies that can accurately estimate SSTs is one of the most common themes in paleoceanography. Archeal‐derived hydroxylated isoprenoid glycerol dialkyl glycerol tetraethers (OH‐GDGTs) preserved in marine sediments have a potential to reflect past sea surface temperatures (SSTs). However, the source organisms of OH‐GDGTs can live throughout the water column, implying that sedimentary OH‐GDGTs record an integrated water column signal rather than only SST. Currently, the effect of water depth on sedimentary OH‐GDGTs remains vague. We investigated the distribution of OH‐GDGTs in 13 sediment cores in the hadal zone, which represents the deepest and least explored habitats on Earth's surface. The data from this study and literature revealed that the deep‐sea (including hadal trench) sediments are characterized by a predominance of OH‐GDGT‐0, which causes a considerable underestimation of OH‐GDGT‐derived SSTs. We evaluated the effects of both SST and water depth on OH‐GDGTs and established new calibrations that more accurately reconstruct paleotemperatures at a global scale. Key Points Sedimentary hydroxylated isoprenoid glycerol dialkyl glycerol tetraethers (OH‐GDGTs) were first investigated in the Kermadec and Atacama trenches with water depth ranging from 2,560 to 9,560 m Water depth has large impact on OH‐GDGT distributions with higher OH‐GDGT‐0% and lower RI‐OH′ values of deep‐sea sediments More accurate global sea surface temperature calibrations based on OH‐GDGTs were established

Hadal trenches represent the deepest part of the ocean and are dynamic depocenters with intensified prokaryotic activity. Here, we explored the distribution and drivers of prokaryotic and viral abundance from the ocean surface and 40 cm into sediments in two hadal trench regions with contrasting surface productivity. In the water column, prokaryotic and viral abundance decreased with water depth before reaching a rather stable level at ∼ 4000 m depth at both trench systems, while virus to prokaryote ratios were increasing with depth, presumably reflecting the declining availability of organic material. Prokaryotic and viral abundances in sediments were lower at the adjacent abyssal sites than at the hadal sites and declined exponentially with sediment depth, closely tracking the attenuation of total organic carbon (TOC) content. In contrast, hadal sediment exhibited erratic depth profiles of prokaryotes and viruses with many subsurface peaks. The prokaryotic abundance correlated well to extensive fluctuations in TOC content at centimeter scale, which were likely caused by recurring mass wasting events. Yet while prokaryotic and viral abundances cross correlated well in the abyssal sediments, there was no clear correlation in the hadal sites. The results suggested that dynamic depositional conditions and higher substrate availability result in a high spatial heterogeneity in viral and prokaryotic abundances in hadal sediments in comparison to more stable abyssal settings. We argue that these conditions enhance the relatively importance of viruses for prokaryotic mortality and carbon recycling in hadal settings.

The resilience and recovery dynamics of deep-sea habitats impacted by bottom trawling are poorly known. This paper reports on a fishing impact recovery comparison based on four towed camera surveys over a 15-year period (2001-2015) on a group of small seamounts on the Chatham Rise, east of New Zealand, on which pre-disturbance benthic communities are dominated by thicket-forming scleractinian corals. The six seamounts studied encompass a range of trawl histories, including one with high and persistent levels of trawling throughout the survey period, two with intermittent and intermediate levels of trawling, two which were low/untrawled, and one, ‘Morgue’, which was closed to trawling in 2001, having been heavily trawled up to that point. Still photographs from all surveys were analysed for the identification and abundance of all visible benthic fauna with effort made to ensure consistency of data among surveys. Because increases in image resolution and quality over time resulted in a persistent trend of increasing abundances, analyses were concentrated on comparisons among seamounts within surveys and how these relationships changed with time. The abundance, species richness, and diversity of benthic communities were higher on low/untrawled seamounts than on those that had been trawled. Multivariate community structure showed similar patterns at each survey point, the low/untrawled seamounts being strongly dissimilar to the persistently trawled seamount, with the others ranged between these extremes, broadly in accordance with their cumulative trawl histories. Community structure on the persistently trawled seamount was less variable than on the other seamounts throughout the study period, possibly because of regular ‘re-setting’ of the community by disturbance from trawling. Although there was some variability in results between whole seamount and summit sector analyses, in general communities on Morgue remained similar to those on the persistently trawled seamount, showing no indication of steps towards recovery to its pre-disturbance state following its closure. These results indicate low resilience of benthic communities on the seamounts to the effects of bottom trawling.

Notes how cold seep communities with distinctive chemoautotrophic fauna occur where hydrocarbon-rich fluids escape from the seabed. Describes community composition, population densities, spatial extent, and within-region variability of epifaunal communities at methane-rich cold seep sites on the Hikurangi Margin, New Zealand. Uses data from towed camera transects to match observations to information about the probable life-history characteristics of the principal fauna to develop a hypothetical succession sequence for the Hikurangi seep communities, from the onset of fluid flux to senescence. Notes how the seep sites are subject to disturbance from bottom trawling at present and potentially from gas hydrate extraction in future. Source: National Library of New Zealand Te Puna Matauranga o Aotearoa, licensed by the Department of Internal Affairs for re-use under the Creative Commons Attribution 3.0 New Zealand Licence.

Seamounts shape the topography of all ocean basins and can be hotspots of biological activity in the deep sea. The Census of Marine Life on Seamounts (CenSeam) was a field program that examined seamounts as part of the global Census of Marine Life (CoML) initiative from 2005 to 2010. CenSeam progressed seamount science by collating historical data, collecting new data, undertaking regional and global analyses of seamount biodiversity, mapping species and habitat distributions, challenging established paradigms of seamount ecology, developing new hypotheses, and documenting the impacts of human activities on seamounts. However, because of the large number of seamounts globally, much about the structure, function and connectivity of seamount ecosystems remains unexplored and unknown. Continual, and potentially increasing, threats to seamount resources from fishing and seabed mining are creating a pressing demand for research to inform conservation and management strategies. To meet this need, intensive science effort in the following areas will be needed: 1) Improved physical and biological data; of particular importance is information on seamount location, physical characteristics (e.g. habitat heterogeneity and complexity), more complete and intensive biodiversity inventories, and increased understanding of seamount connectivity and faunal dispersal; 2) New human impact data; these shall encompass better studies on the effects of human activities on seamount ecosystems, as well as monitoring long-term changes in seamount assemblages following impacts (e.g. recovery); 3) Global data repositories; there is a pressing need for more comprehensive fisheries catch and effort data, especially on the high seas, and compilation or maintenance of geological and biodiversity databases that underpin regional and global analyses; 4) Application of support tools in a data-poor environment; conservation and management will have to increasingly rely on predictive modelling techniques, critical evaluation of environmental surrogates as faunal \"proxies\", and ecological risk assessment.

The deepest part of the global ocean, hadal trenches, are considered to act as depocenters for organic material. Relatively high microbial activity has been demonstrated in the deepest sections of some hadal trenches, but the deposition dynamics are thought to be spatially and temporally variable. Here, we explore sediment characteristics and in-situ benthic oxygen uptake along two trenches with contrasting surface primary productivity: the Kermadec and Atacama trenches. We find that benthic oxygen consumption varies by a factor of about 10 between hadal sites but is in all cases intensified relative to adjacent abyssal plains. The benthic oxygen uptake of the two trench regions reflects the difference in surface production, whereas variations within each trench are modulated by local deposition dynamics. Respiratory activity correlates with the sedimentary inventories of organic carbon and phytodetrital material. We argue that hadal trenches represent deep sea hotspots for early diagenesis and are more diverse and dynamic environments than previously recognized.