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"Saito, Yuko"
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YAP-dependent necrosis occurs in early stages of Alzheimer’s disease and regulates mouse model pathology
2020
The timing and characteristics of neuronal death in Alzheimer’s disease (AD) remain largely unknown. Here we examine AD mouse models with an original marker, myristoylated alanine-rich C-kinase substrate phosphorylated at serine 46 (pSer46-MARCKS), and reveal an increase of neuronal necrosis during pre-symptomatic phase and a subsequent decrease during symptomatic phase. Postmortem brains of mild cognitive impairment (MCI) rather than symptomatic AD patients reveal a remarkable increase of necrosis. In vivo imaging reveals instability of endoplasmic reticulum (ER) in mouse AD models and genome-edited human AD iPS cell-derived neurons. The level of nuclear Yes-associated protein (YAP) is remarkably decreased in such neurons under AD pathology due to the sequestration into cytoplasmic amyloid beta (Aβ) aggregates, supporting the feature of YAP-dependent necrosis. Suppression of early-stage neuronal death by AAV-YAPdeltaC reduces the later-stage extracellular Aβ burden and cognitive impairment, suggesting that preclinical/prodromal YAP-dependent neuronal necrosis represents a target for AD therapeutics.
The precise mechanisms of neuronal cell death in neurodegeneration are not fully understood. Here the authors show that YAP-mediated neuronal necrosis is increased in pre-symptomatic stages of Alzheimer’s disease and intervention to the necrosis rescues extracellular Aβ aggregation and symptoms in a mouse model.
Journal Article
Selective recovery of pyrolyzates of biodegradable (PLA, PHBH) and common plastics (HDPE, PP, PS) during co-pyrolysis under slow heating
2024
Pyrolytic synergistic interactions, in which the production of pyrolyzates is enhanced or inhibited, commonly occur during the co-pyrolysis of different polymeric materials, such as plastics and biomass. Although these interactions can increase the yield of desired pyrolysis products under controlled degradation conditions, the desired compounds must be separated from complex pyrolyzates and further purified. To balance these dual effects, this study was aimed at examining pyrolytic synergistic interactions during slow heating co-pyrolysis of biodegradable plastics including polylactic acid (PLA) and poly(3-hydroxybutyrate-
co
-3-hydroxyhexaoate) (PHBH) and petroleum-based plastics including high-density polyethylene (HDPE), polypropylene (PP), and polystyrene (PS). Comprehensive investigations based on thermogravimetric analysis, pyrolysis–gas chromatography/mass spectrometry, and evolved gas analysis-mass spectrometry revealed that PLA and PHBH decompose at lower temperatures (273–378 °C) than HDPE, PP, and PS (386–499 °C), with each polymer undergoing independent decomposition without any pyrolytic interactions. Thus, the independent pyrolysis of biodegradable plastics, such as PLA and PHBH, with common plastics, such as HDPE, PP, and PS, can theoretically be realized through temperature control, enabling the selective recovery of their pyrolyzates in different temperature ranges. Thus, pyrolytic approaches can facilitate the treatment of mixed biodegradable and common plastics.
Journal Article
TDP-43 transports ribosomal protein mRNA to regulate axonal local translation in neuronal axons
by
Hirokawa, Sachiko
,
Nishizawa, Masatoyo
,
Jin, Yinshi
in
5' Untranslated Regions
,
Amyotrophic lateral sclerosis
,
Axon guidance
2020
Mislocalization and abnormal deposition of TDP-43 into the cytoplasm (TDP-43 proteinopathy) is a hallmark in neurons of amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration (FTLD). However, the pathogenic mechanism of the diseases linked to TDP-43 is largely unknown. We hypothesized that the failure of mRNA transport to neuronal axons by TDP-43 may contribute to neurodegeneration in ALS and FTLD, and sought to examine the function of TDP-43 by identifying its target mRNA for axonal transport. We found that mRNAs related to translational function including ribosomal proteins (RPs) were decreased by shRNA-based TDP-43 knock-down in neurites of cortical neurons. TDP-43 binds to and transports the RP mRNAs through their 5′ untranslated region, which contains a common 5′ terminal oligopyrimidine tract motif and a downstream GC-rich region. We showed by employing in vitro and in vivo models that the RP mRNAs were translated and incorporated into native ribosomes locally in axons to maintain functionality of axonal ribosomes, which is required for local protein synthesis in response to stimulation and stress to axons. We also found that RP mRNAs were reduced in the pyramidal tract of sporadic ALS cases harboring TDP-43 pathology. Our results elucidated a novel function of TDP-43 to control transport of RP mRNAs and local translation by ribosomes to maintain morphological integrity of neuronal axons, and proved the influence of this function of TDP-43 on neurodegeneration in ALS and FTLD associated with TDP-43 proteinopathy.
Journal Article
Heteromeric amyloid filaments of ANXA11 and TDP-43 in FTLD-TDP type C
2024
Neurodegenerative diseases are characterized by the abnormal filamentous assembly of specific proteins in the central nervous system
1
. Human genetic studies have established a causal role for protein assembly in neurodegeneration
2
. However, the underlying molecular mechanisms remain largely unknown, which is limiting progress in developing clinical tools for these diseases. Recent advances in cryo-electron microscopy have enabled the structures of the protein filaments to be determined from the brains of patients
1
. All neurodegenerative diseases studied to date have been characterized by the self-assembly of proteins in homomeric amyloid filaments, including that of TAR DNA-binding protein 43 (TDP-43) in amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration with TDP-43 inclusions (FTLD-TDP) types A and B
3
,
4
. Here we used cryo-electron microscopy to determine filament structures from the brains of individuals with FTLD-TDP type C, one of the most common forms of sporadic FTLD-TDP. Unexpectedly, the structures revealed that a second protein, annexin A11 (ANXA11), co-assembles with TDP-43 in heteromeric amyloid filaments. The ordered filament fold is formed by TDP-43 residues G282/G284–N345 and ANXA11 residues L39–Y74 from their respective low-complexity domains. Regions of TDP-43 and ANXA11 that were previously implicated in protein–protein interactions form an extensive hydrophobic interface at the centre of the filament fold. Immunoblots of the filaments revealed that the majority of ANXA11 exists as an approximately 22 kDa N-terminal fragment lacking the annexin core domain. Immunohistochemistry of brain sections showed the colocalization of ANXA11 and TDP-43 in inclusions, redefining the histopathology of FTLD-TDP type C. This work establishes a central role for ANXA11 in FTLD-TDP type C. The unprecedented formation of heteromeric amyloid filaments in the human brain revises our understanding of amyloid assembly and may be of significance for the pathogenesis of neurodegenerative diseases.
Using cryo-electron microscopy, heteromeric amyloid filaments composed of TDP-43 and ANXA11 in the brains of patients with frontotemporal lobar degeneration type C are discovered.
Journal Article
Characteristics of the steam degradation of poly(lactic acid) and poly(3-hydroxybutyrate-co-3-hydroxyhexanoate)
2024
The introduction of biodegradable plastics is considered a practical approach to reducing plastic waste accumulation in the environment. Regardless of their biodegradability, plastics should be recycled to effectively utilize and circulate carbon as a resource. Herein, the use of pyrolysis was examined as a method for recycling two common biobased/biodegradable plastics: PLA and PHBH. The pyrolysis of PLA produced lactides (10.7 wt% at 400 °C), but the yield was decreased when the pyrolysis temperature was increased. The presence of steam promoted the hydrolysis of PLA: a steam concentration of 25 vol % increased, the production of lactides at 400 °C to 17.4 wt%. The pyrolysis of PHBH primarily yielded crotonic acid (30.1 wt% at 400 °C), and the yield increased with increasing pyrolysis temperature (71.8 wt% at 800 °C). Steam injection increased the hydrolysis of oligomers, resulting in a 76.1 wt% yield of crotonic acid at 600 °C with a steam concentration of 25 vol %. Thus, we determined that hydrolysis and pyrolysis progress simultaneously under a steam atmosphere, increasing the chemical feedstock recovery from PLA and PHBH. These findings may lead to the proposal of effective degradation methods for treating biobased/biodegradable plastic wastes and ways to maximize the conversion efficiency and target product yields.Steam decomposition of poly(lactic acid) (PLA) and poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) (PHBH) enhanced the recovery of chemical feedstock compared with simple pyrolysis. Steam enhanced the hydrolysis of PLA and resulted in the formation of short-chain compounds with hydroxyl end groups, and subsequent pyrolysis of them improved lactide recovery. Monomer production from PHBH was also enhanced by simultaneous hydrolysis and pyrolysis under steam decomposition.
Journal Article
Cooperative nuclear action of RNA‐binding proteins PSF and G3BP2 to sustain neuronal cell viability is decreased in aging and dementia
by
Satoshi Inoue
,
Kaoru Sato
,
Ken‐ichi Takayama
in
Adaptor Proteins, Signal Transducing - genetics
,
Adaptor Proteins, Signal Transducing - metabolism
,
Aging
2024
Dysfunctional RNA‐binding proteins (RBPs) have been implicated in several geriatric diseases, including Alzheimer's disease (AD). However, little is known about the nuclear molecular actions and cooperative functions mediated by RBPs that affect gene regulation in sporadic AD or aging. In the present study, we investigated aging‐ and AD‐associated changes in the expression of PSF and G3BP2, which are representative RBPs associated with sex hormone activity. We determined that both PSF and G3BP2 levels were decreased in aged brains compared to young brains of mice. RNA sequencing (RNA‐seq) analysis of human neuronal cells has shown that PSF is responsible for neuron‐specific functions and sustains cell viability. In addition, we showed that PSF interacted with G3BP2 in the nucleus and stress granules (SGs) at the protein level. Moreover, PSF–mediated gene regulation at the RNA level correlated with G3BP2. Interestingly, PSF and G3BP2 target genes are associated with AD development. Mechanistically, quantitative reverse transcription‐polymerase chain reaction (qRT‐PCR) analysis demonstrated that the interaction of RBPs with the pre‐mRNA of target genes enhanced post‐transcriptional mRNA stability, suggesting a possible role for these RBPs in preserving neuronal cell viability. Notably, in the brains of patients with sporadic AD, decreased expression of PSF and G3BP2 in neurons was observed compared to non‐AD patients. Overall, our findings suggest that the cooperative action of PSF and G3BP2 in the nucleus is important for preventing aging and AD development. Little is known about the nuclear molecular actions and cooperative functions mediated by RNA‐binding proteins (RBPs) in sporadic Alzheimer's disease (AD) or aging. We showed reduced expression levels of PSF and G3BP2, which are representative RBPs associated with sex hormone activity, in aging and AD development. PSF interacted with G3BP2 mainly in the nucleus and regulate neuron activity associated gene expressions at the RNA level, suggesting the preventive role of both RBPs for aging‐associated diseases such as dementia.
Journal Article
Beech Wood Pyrolysis in Polyethylene Melt as a Means of Enhancing Levoglucosan and Methoxyphenol Production
2019
Recycling wood/plastic composites in municipal and industrial wastes currently represents a challenge which needs to be overcome. In this work, we considered the concept of independent pyrolysis of wood and plastic in wood/plastic mixtures for enabling a versatile catalytic process design which is capable of producing recoverable final products from both components. In order to reveal the influence of plastic on wood pyrolysis, the pyrolysis of beech wood (BW, wood material) in a polyethylene (PE) melt (polyolefin material) was performed at 350 °C. The combined use of thermogravimetric analysis, product recovery studies,
in situ
radical characterisations, and microscopic analysis revealed the influence of the PE melt on the BW pyrolysis. More specifically, a physical prevention of the intermolecular condensation and hydrogen abstraction from PE pyrolysates in the liquid/solid phase was observed. These interactions enhanced the production of levoglucosan and methoxyphenols by factors of 1.7 and 1.4, respectively, during the BW pyrolysis in the PE melt. Based on these results, we concluded that the observed synergistic effects could potentially control the yield and quality of useful products, as well as the utilisation of mixed wood/plastic wastes, which cannot be effectively recycled otherwise.
Journal Article
Lewy pathology of the esophagus correlates with the progression of Lewy body disease: a Japanese cohort study of autopsy cases
2021
Lewy body disease (LBD) is a spectrum of progressive neurodegenerative disorders characterized by the wide distribution of Lewy bodies and neurites in the central and peripheral nervous system (CNS, PNS). Clinical diagnoses include Parkinson’s disease (PD), dementia with Lewy bodies, or pure autonomic failure. All types of LBD are accompanied by non-motor symptoms (NMSs) including gastrointestinal dysfunctions such as constipation. Its relationship to Lewy body-related α-synucleinopathy (Lewy pathology) of the enteric nervous system (ENS) is attracting attention because it can precede the motor symptoms. To clarify the role of ENS Lewy pathology in disease progression, we performed a clinicopathological study using the Brain Bank for Aging Research in Japan. Five-hundred and eighteen cases were enrolled in the study. Lewy pathology of the CNS and PNS, including the lower esophagus as a representative of the ENS, was examined via autopsy findings. Results showed that one-third of older people (178 cases, 34%) exhibited Lewy pathology, of which 78 cases (43.8%) exhibited the pathology in the esophagus. In the esophageal wall, Auerbach’s plexus (41.6%) was most susceptible to the pathology, followed by the adventitia (33.1%) and Meissner’s plexus (14.6%). Lewy pathology of the esophagus was significantly associated with autonomic failures such as constipation (p < 0.0001) and among PNS regions, correlated the most with LBD progression (r = 0.95, p < 0.05). These findings suggest that the propagation of esophageal Lewy pathology is a predictive factor of LBD.
Journal Article
Ultrastructural and biochemical classification of pathogenic tau, α-synuclein and TDP-43
by
Hashizume Yoshio
,
Murayama Shigeo
,
Tarutani Airi
in
Animal models
,
Biochemical analysis
,
Disease
2022
Intracellular accumulation of abnormal proteins with conformational changes is the defining neuropathological feature of neurodegenerative diseases. The pathogenic proteins that accumulate in patients' brains adopt an amyloid-like fibrous structure and exhibit various ultrastructural features. The biochemical analysis of pathogenic proteins in sarkosyl-insoluble fractions extracted from patients’ brains also shows disease-specific features. Intriguingly, these ultrastructural and biochemical features are common within the same disease group. These differences among the pathogenic proteins extracted from patients’ brains have important implications for definitive diagnosis of the disease, and also suggest the existence of pathogenic protein strains that contribute to the heterogeneity of pathogenesis in neurodegenerative diseases. Recent experimental evidence has shown that prion-like propagation of these pathogenic proteins from host cells to recipient cells underlies the onset and progression of neurodegenerative diseases. The reproduction of the pathological features that characterize each disease in cellular and animal models of prion-like propagation also implies that the structural differences in the pathogenic proteins are inherited in a prion-like manner. In this review, we summarize the ultrastructural and biochemical features of pathogenic proteins extracted from the brains of patients with neurodegenerative diseases that accumulate abnormal forms of tau, α-synuclein, and TDP-43, and we discuss how these disease-specific properties are maintained in the brain, based on recent experimental insights.
Journal Article
Mass spectrometric analysis of accumulated TDP-43 in amyotrophic lateral sclerosis brains
by
Shishido, Takeo
,
Saito, Yuko
,
Obi, Tomokazu
in
631/378/1689/1285
,
631/45/470/2284
,
631/45/475
2016
TDP-43 is the major disease-associated protein involved in the pathogenesis and progression of amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration with ubiquitin-positive inclusions linked to TDP-43 pathology (FTLD-TDP). Abnormal phosphorylation, truncation and cytoplasmic mis-localization are known to be the characteristics for the aggregated forms of TDP-43 and gain of toxic abnormal TDP-43 or loss of function of physiological TDP-43 have been suggested as the cause of neurodegeneration. However, most of the post-translational modifications or truncation sites in the abnormal TDP-43 in brains of patients remain to be identified by protein chemical analysis. In this study, we carried out a highly sensitive liquid chromatography-mass spectrometry analysis of Sarkosyl-insoluble pathological TDP-43 from brains of ALS patients and identified several novel phosphorylation sites, deamidation sites and cleavage sites. Almost all modifications were localized in the Gly-rich C-terminal half. Most of the cleavage sites identified in this study are novel and are located in N-terminal half, suggesting that these sites may be more accessible to proteolytic enzymes. The data obtained in this study provide a foundation for the molecular mechanisms of TDP-43 aggregation and ALS pathogenesis.
Journal Article