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result(s) for
"Sanes, Dan H."
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Top-down modulation of sensory cortex gates perceptual learning
by
Sanes, Dan H.
,
Caras, Melissa L.
in
Animals
,
Auditory Cortex - physiology
,
Auditory Perception - physiology
2017
Practice sharpens our perceptual judgments, a process known as perceptual learning. Although several brain regions and neural mechanisms have been proposed to support perceptual learning, formal tests of causality are lacking. Furthermore, the temporal relationship between neural and behavioral plasticity remains uncertain. To address these issues, we recorded the activity of auditory cortical neurons as gerbils trained on a sound detection task. Training led to improvements in cortical and behavioral sensitivity that were closely matched in terms of magnitude and time course. Surprisingly, the degree of neural improvement was behaviorally gated. During task performance, cortical improvements were large and predicted behavioral outcomes. In contrast, during nontask listening sessions, cortical improvements were weak and uncorrelated with perceptual performance. Targeted reduction of auditory cortical activity during training diminished perceptual learning while leaving psychometric performance largely unaffected. Collectively, our findings suggest that training facilitates perceptual learning by strengthening both bottom-up sensory encoding and top-down modulation of auditory cortex.
Journal Article
SLEAP: A deep learning system for multi-animal pose tracking
by
D’Uva, John
,
Mitelut, Catalin C.
,
Castro, Marielisa Diez
in
631/114/1305
,
631/114/794
,
631/378/116
2022
The desire to understand how the brain generates and patterns behavior has driven rapid methodological innovation in tools to quantify natural animal behavior. While advances in deep learning and computer vision have enabled markerless pose estimation in individual animals, extending these to multiple animals presents unique challenges for studies of social behaviors or animals in their natural environments. Here we present Social LEAP Estimates Animal Poses (SLEAP), a machine learning system for multi-animal pose tracking. This system enables versatile workflows for data labeling, model training and inference on previously unseen data. SLEAP features an accessible graphical user interface, a standardized data model, a reproducible configuration system, over 30 model architectures, two approaches to part grouping and two approaches to identity tracking. We applied SLEAP to seven datasets across flies, bees, mice and gerbils to systematically evaluate each approach and architecture, and we compare it with other existing approaches. SLEAP achieves greater accuracy and speeds of more than 800 frames per second, with latencies of less than 3.5 ms at full 1,024 × 1,024 image resolution. This makes SLEAP usable for real-time applications, which we demonstrate by controlling the behavior of one animal on the basis of the tracking and detection of social interactions with another animal.
SLEAP is a versatile deep learning-based multi-animal pose-tracking tool designed to work on videos of diverse animals, including during social behavior.
Journal Article
Continuous monitoring and machine vision reveals that developing gerbils exhibit structured social behaviors prior to the emergence of autonomy
2025
Investigating social and independent behavior structure in early life is critical for understanding development and brain maturation in social mammals. However, this investigation necessitates monitoring animals over weeks to months often with subsecond time resolution creating challenges for both lab studies focused on brief observation periods and field studies in which animal tracking can be imprecise. Here we used machine vision and two-week long continuous behavior recordings of families of gerbils, a highly social rodent, in large, undisturbed home environments to quantify the behavioral development of individual pups. We discovered that individual pups exhibited complex social behaviors from the first day they left the nest including a preference for interactions with siblings over parents. Critically, independent behaviors such as foraging for food and water emerged several days later, each with a stereotyped temporal trajectory. Analysis of individual animal development confirmed the quality of our tracking methods and the stability and distinctness of each behavioral measure. Our work supports a model in which early and sustained social interactions may be supportive of solitary exploration for physiological needs. This model suggests that understanding the development of behavioral independence as well as maturation of sensory and motor systems in social rodents such as gerbils may require integration of social behavioral knowledge earlier than typically considered.
Journal Article
Sensory cortex plasticity supports auditory social learning
by
Yao, Justin D.
,
Sanes, Dan H.
,
Paraouty, Nihaad
in
631/378/1595/2618
,
631/378/2619/2618
,
631/378/2645
2023
Social learning (SL) through experience with conspecifics can facilitate the acquisition of many behaviors. Thus, when Mongolian gerbils are exposed to a demonstrator performing an auditory discrimination task, their subsequent task acquisition is facilitated, even in the absence of visual cues. Here, we show that transient inactivation of auditory cortex (AC) during exposure caused a significant delay in task acquisition during the subsequent practice phase, suggesting that AC activity is necessary for SL. Moreover, social exposure induced an improvement in AC neuron sensitivity to auditory task cues. The magnitude of neural change during exposure correlated with task acquisition during practice. In contrast, exposure to only auditory task cues led to poorer neurometric and behavioral outcomes. Finally, social information during exposure was encoded in the AC of observer animals. Together, our results suggest that auditory SL is supported by AC neuron plasticity occurring during social exposure and prior to behavioral performance.
Social learning through observing conspecifics can facilitate the acquisition of behaviors. Here, the authors show in Mongolian gerbils that auditory cortex is necessary for social learning of an auditory discrimination task, and that social exposure improves neuronal coding of auditory task cues.
Journal Article
Dopaminergic signaling supports auditory social learning
by
Paraouty, Nihaad
,
Sanes, Dan H.
,
Rizzuto, Catherine R.
in
631/378/1595
,
631/378/2645
,
631/378/3919
2021
Explicit rewards are commonly used to reinforce a behavior, a form of learning that engages the dopaminergic neuromodulatory system. In contrast, skill acquisition can display dramatic improvements from a social learning experience, even though the observer receives no explicit reward. Here, we test whether a dopaminergic signal contributes to social learning in naïve gerbils that are exposed to, and learn from, a skilled demonstrator performing an auditory discrimination task. Following five exposure sessions, naïve observer gerbils were allowed to practice the auditory task and their performance was assessed across days. We first tested the effect of an explicit food reward in the observer’s compartment that was yoked to the demonstrator’s performance during exposure sessions. Naïve observer gerbils with the yoked reward learned the discrimination task significantly faster, as compared to unrewarded observers. The effect of this explicit reward was abolished by administration of a D1/D5 dopamine receptor antagonist during the exposure sessions. Similarly, the D1/D5 antagonist reduced the rate of learning in unrewarded observers. To test whether a dopaminergic signal was sufficient to enhance social learning, we administered a D1/D5 receptor agonist during the exposure sessions in which no reward was present and found that the rate of learning occurred significantly faster. Finally, a quantitative analysis of vocalizations during the exposure sessions suggests one behavioral strategy that contributes to social learning. Together, these results are consistent with a dopamine-dependent reward signal during social learning.
Journal Article
Auditory processing remains sensitive to environmental experience during adolescence in a rodent model
2022
Elevated neural plasticity during development contributes to dramatic improvements in perceptual, motor, and cognitive skills. However, malleable neural circuits are vulnerable to environmental influences that may disrupt behavioral maturation. While these risks are well-established prior to sexual maturity (i.e., critical periods), the degree of neural vulnerability during adolescence remains uncertain. Here, we induce transient hearing loss (HL) spanning adolescence in gerbils, and ask whether behavioral and neural maturation are disrupted. We find that adolescent HL causes a significant perceptual deficit that can be attributed to degraded auditory cortex processing, as assessed with wireless single neuron recordings and within-session population-level analyses. Finally, auditory cortex brain slices from adolescent HL animals reveal synaptic deficits that are distinct from those typically observed after critical period deprivation. Taken together, these results show that diminished adolescent sensory experience can cause long-lasting behavioral deficits that originate, in part, from a dysfunctional cortical circuit.
Anbuhl et al. identify adolescence as a time of vulnerability to sensory deprivation. They find that even a transient loss of auditory experience causes long-lasting perceptual deficits that originate, in part, from a cortical processing deficit.
Journal Article
The onset of visual experience gates auditory cortex critical periods
2016
Sensory systems influence one another during development and deprivation can lead to cross-modal plasticity. As auditory function begins before vision, we investigate the effect of manipulating visual experience during auditory cortex critical periods (CPs) by assessing the influence of early, normal and delayed eyelid opening on hearing loss-induced changes to membrane and inhibitory synaptic properties. Early eyelid opening closes the auditory cortex CPs precociously and dark rearing prevents this effect. In contrast, delayed eyelid opening extends the auditory cortex CPs by several additional days. The CP for recovery from hearing loss is also closed prematurely by early eyelid opening and extended by delayed eyelid opening. Furthermore, when coupled with transient hearing loss that animals normally fully recover from, very early visual experience leads to inhibitory deficits that persist into adulthood. Finally, we demonstrate a functional projection from the visual to auditory cortex that could mediate these effects.
Visual and auditory systems influence each other during development. Here, the authors show that the onset of eyelid opening regulates critical points during which the auditory cortex is sensitive to hearing loss or the restoration of hearing
Journal Article
Developmental deprivation-induced perceptual and cortical processing deficits in awake-behaving animals
2018
Sensory deprivation during development induces lifelong changes to central nervous system function that are associated with perceptual impairments. However, the relationship between neural and behavioral deficits is uncertain due to a lack of simultaneous measurements during task performance. Therefore, we telemetrically recorded from auditory cortex neurons in gerbils reared with developmental conductive hearing loss as they performed an auditory task in which rapid fluctuations in amplitude are detected. These data were compared to a measure of auditory brainstem temporal processing from each animal. We found that developmental HL diminished behavioral performance, but did not alter brainstem temporal processing. However, the simultaneous assessment of neural and behavioral processing revealed that perceptual deficits were associated with a degraded cortical population code that could be explained by greater trial-to-trial response variability. Our findings suggest that the perceptual limitations that attend early hearing loss are best explained by an encoding deficit in auditory cortex.
Journal Article
Unsupervised discovery of family specific vocal usage in the Mongolian gerbil
by
Peterson, Ralph E
,
Williams, Alex H
,
Capo-Battaglia, Athena
in
Acoustics
,
Animal behavior
,
Animals
2024
In nature, animal vocalizations can provide crucial information about identity, including kinship and hierarchy. However, lab-based vocal behavior is typically studied during brief interactions between animals with no prior social relationship, and under environmental conditions with limited ethological relevance. Here, we address this gap by establishing long-term acoustic recordings from Mongolian gerbil families, a core social group that uses an array of sonic and ultrasonic vocalizations. Three separate gerbil families were transferred to an enlarged environment and continuous 20-day audio recordings were obtained. Using a variational autoencoder (VAE) to quantify 583,237 vocalizations, we show that gerbils exhibit a more elaborate vocal repertoire than has been previously reported and that vocal repertoire usage differs significantly by family. By performing gaussian mixture model clustering on the VAE latent space, we show that families preferentially use characteristic sets of vocal clusters and that these usage preferences remain stable over weeks. Furthermore, gerbils displayed family-specific transitions between vocal clusters. Since gerbils live naturally as extended families in complex underground burrows that are adjacent to other families, these results suggest the presence of a vocal dialect which could be exploited by animals to represent kinship. These findings position the Mongolian gerbil as a compelling animal model to study the neural basis of vocal communication and demonstrates the potential for using unsupervised machine learning with uninterrupted acoustic recordings to gain insights into naturalistic animal behavior.
Every time you speak, the sounds coming out of your mouth may carry more meaning that you may have intended; they may reveal, for example, which country, city or even neighborhood you may be coming from. Indeed, the vocal patterns that humans use to communicate differ from one population to the next, creating an array of languages, dialects and accents.
Such diversity has also been identified in various social species across the animal kingdom. Naked mole rats, for instance, which live underground in complex societies, exhibit different ‘dialects’ depending on their group of origin. Yet studying the vocal patterns of animals has remained difficult, especially for species inhabiting burrows or other environments difficult to access.
Aiming to bypass these limitations, Peterson et al. adopted a ‘naturalistic’ approach that allowed them to capture the vocal calls of three families of Mongolian gerbils living undisturbed in enclosures that mimic features of their natural environment. These animals spend their lives underground in tight-knit families, with multiple groups often being in close proximity. Researchers have speculated that individuals may rely on vocal cues to identify whether they are part of the same colony, as they are often too far from each other to rely on sight or smell.
Over half a million vocalizations obtained continuously through the course of 20 days were analyzed using an artificial intelligence technique known as unsupervised machine learning. The analyses helped add new types of calls to the gerbil vocal repertoire, but also highlighted its complexity. In particular, they revealed that the animals could combine individual vocal elements into complex sequences. More importantly, this approach showed that gerbil families have vocal dialects that are stable across weeks, with each group displaying a preference for certain call types (i.e. words) and certain sequential patterns (i.e. phrases).
These findings demonstrate the benefits of the approach developed by Peterson et al. for the study of animal vocalizations. Going forward, they also suggest that the Mongolian gerbil could be used as an animal model to study the neural basis of vocal communication.
Journal Article
Asymmetric Excitatory Synaptic Dynamics Underlie Interaural Time Difference Processing in the Auditory System
by
Jercog, Pablo E.
,
Kotak, Vibhakar C.
,
Sanes, Dan H.
in
Animals
,
Auditory Pathways
,
Computational Biology/Computational Neuroscience
2010
Low-frequency sound localization depends on the neural computation of interaural time differences (ITD) and relies on neurons in the auditory brain stem that integrate synaptic inputs delivered by the ipsi- and contralateral auditory pathways that start at the two ears. The first auditory neurons that respond selectively to ITD are found in the medial superior olivary nucleus (MSO). We identified a new mechanism for ITD coding using a brain slice preparation that preserves the binaural inputs to the MSO. There was an internal latency difference for the two excitatory pathways that would, if left uncompensated, position the ITD response function too far outside the physiological range to be useful for estimating ITD. We demonstrate, and support using a biophysically based computational model, that a bilateral asymmetry in excitatory post-synaptic potential (EPSP) slopes provides a robust compensatory delay mechanism due to differential activation of low threshold potassium conductance on these inputs and permits MSO neurons to encode physiological ITDs. We suggest, more generally, that the dependence of spike probability on rate of depolarization, as in these auditory neurons, provides a mechanism for temporal order discrimination between EPSPs.
Journal Article