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Imaging spectrometry from aerial or spaceborne platforms, also known as hyperspectral remote sensing, provides dense sampled and fine structured spectral information for each image pixel, allowing the user to identify and characterize Earth surface materials such as minerals in rocks and soils, vegetation types and stress indicators, and water constituents. The recently launched DLR Earth Sensing Imaging Spectrometer (DESIS) installed on the International Space Station (ISS) closes the long-term gap of sparsely available spaceborne imaging spectrometry data and will be part of the upcoming fleet of such new instruments in orbit. DESIS measures in the spectral range from 400 and 1000 nm with a spectral sampling distance of 2.55 nm and a Full Width Half Maximum (FWHM) of about 3.5 nm. The ground sample distance is 30 m with 1024 pixels across track. In this article, a detailed review is given on the applicability of DESIS data based on the specifics of the instrument, the characteristics of the ISS orbit, and the methods applied to generate products. The various DESIS data products available for users are described with the focus on specific processing steps. The results of the data quality and product validation studies show that top-of-atmosphere radiance, geometrically corrected, and bottom-of-atmosphere reflectance products meet the mission requirements. The limitations of the DESIS data products are also subject to a critical examination.

Whether for identification and characterization of materials or for monitoring of the environment, space-based hyperspectral instruments are very useful. Hyperspectral instruments measure several dozens up to hundreds of spectral bands. These data help to reconstruct the spectral properties like reflectance or emission of Earth surface or the absorption of the atmosphere, and to identify constituents on land, water, and in the atmosphere. There are a lot of possible applications, from vegetation and water quality up to greenhouse gas monitoring. But the actual number of hyperspectral space-based missions or hyperspectral space-based data is limited. This will be changed in the next years by different missions. The German Aerospace Center (DLR) Earth Sensing Imaging Spectrometer (DESIS) is one of the new currently existing space-based hyperspectral instruments, launched in 2018 and ready to reduce the gap of space-born hyperspectral data. The instrument is operating onboard the International Space Station, using the Multi-User System for Earth Sensing (MUSES) platform. The instrument has 235 spectral bands in the wavelength range from visible (400 nm) to near-infrared (1000 nm), which results in a 2.5 nm spectral sampling distance and a ground sampling distance of 30 m from 400 km orbit of the International Space Station. In this article, the design of the instrument will be described.

The UNFCCC (United Nations Framework Convention on Climate Change) requires the nations of the world to report their carbon dioxide (CO2) emissions. The independent verification of these reported emissions is a cornerstone for advancing towards the emission accounting and reduction measures agreed upon in the Paris Agreement. In this paper, we present the concept and first performance assessment of a compact spaceborne imaging spectrometer with a spatial resolution of 50×50 m2 that could contribute to the “monitoring, verification and reporting” (MVR) of CO2 emissions worldwide. CO2 emissions from medium-sized power plants (1–10 MtCO2yr-1), currently not targeted by other spaceborne missions, represent a significant part of the global CO2 emission budget. In this paper we show that the proposed instrument concept is able to resolve emission plumes from such localized sources as a first step towards corresponding CO2 flux estimates.Through radiative transfer simulations, including a realistic instrument noise model and a global trial ensemble covering various geophysical scenarios, it is shown that an instrument noise error of 1.1 ppm (1σ) can be achieved for the retrieval of the column-averaged dry-air mole fraction of CO2 (XCO2). Despite a limited amount of information from a single spectral window and a relatively coarse spectral resolution, scattering by atmospheric aerosol and cirrus can be partly accounted for in the XCO2 retrieval, with deviations of at most 4.0 ppm from the true abundance for two-thirds of the scenes in the global trial ensemble.We further simulate the ability of the proposed instrument concept to observe CO2 plumes from single power plants in an urban area using high-resolution CO2 emission and surface albedo data for the city of Indianapolis. Given the preliminary instrument design and the corresponding instrument noise error, emission plumes from point sources with an emission rate down to the order of 0.3 MtCO2yr-1 can be resolved, i.e., well below the target source strength of 1 MtCO2yr-1. This leaves a significant margin for additional error sources, like scattering particles and complex meteorology, and shows the potential for subsequent CO2 flux estimates with the proposed instrument concept.

The UNFCCC (United Nations Framework Convention on Climate Change) requires the nations of the world to report their carbon dioxide (CO.sub.2) emissions. The independent verification of these reported emissions is a cornerstone for advancing towards the emission accounting and reduction measures agreed upon in the Paris Agreement. In this paper, we present the concept and first performance assessment of a compact spaceborne imaging spectrometer with a spatial resolution of 50x50 m.sup.2 that could contribute to the \"monitoring, verification and reporting\" (MVR) of CO.sub.2 emissions worldwide. CO.sub.2 emissions from medium-sized power plants (1-10 Mt CO.sub.2 yr.sup.-1 ), currently not targeted by other spaceborne missions, represent a significant part of the global CO.sub.2 emission budget. In this paper we show that the proposed instrument concept is able to resolve emission plumes from such localized sources as a first step towards corresponding CO.sub.2 flux estimates.

The UNFCCC (United Nations Framework Convention on Climate Change) requires the nations of the world to report their carbon dioxide (CO2) emissions. The independent verification of these reported emissions is a cornerstone for advancing towards the emission accounting and reduction measures agreed upon in the Paris Agreement. In this paper, we present the concept and first performance assessment of a compact spaceborne imaging spectrometer with a spatial resolution of 50×50 m2 that could contribute to the “monitoring, verification and reporting” (MVR) of CO2 emissions worldwide. CO2 emissions from medium-sized power plants (1–10 Mt CO2 yr−1), currently not targeted by other spaceborne missions, represent a significant part of the global CO2 emission budget. In this paper we show that the proposed instrument concept is able to resolve emission plumes from such localized sources as a first step towards corresponding CO2 flux estimates. Through radiative transfer simulations, including a realistic instrument noise model and a global trial ensemble covering various geophysical scenarios, it is shown that an instrument noise error of 1.1 ppm (1σ) can be achieved for the retrieval of the column-averaged dry-air mole fraction of CO2 (XCO2). Despite a limited amount of information from a single spectral window and a relatively coarse spectral resolution, scattering by atmospheric aerosol and cirrus can be partly accounted for in the XCO2 retrieval, with deviations of at most 4.0 ppm from the true abundance for two-thirds of the scenes in the global trial ensemble. We further simulate the ability of the proposed instrument concept to observe CO2 plumes from single power plants in an urban area using high-resolution CO2 emission and surface albedo data for the city of Indianapolis. Given the preliminary instrument design and the corresponding instrument noise error, emission plumes from point sources with an emission rate down to the order of 0.3 Mt CO2 yr−1 can be resolved, i.e., well below the target source strength of 1 Mt CO2 yr−1. This leaves a significant margin for additional error sources, like scattering particles and complex meteorology, and shows the potential for subsequent CO2 flux estimates with the proposed instrument concept.

Biodiversity loss due to intensive timber production is a ubiquitous conservation issue across temperate and boreal forest ecosystems. Retention forestry, the retention of deadwood and old‐growth features within production forest, is one management strategy that has been implemented in various countries around the world to conserve a wide range of taxa within managed forests. The success and ecological implications of retention forestry are currently subject to intensive investigation and while some taxa like birds and insects have already been studied frequently, larger mammals have received less attention. Pine martens are one of the few larger mammals in central Europe preferring older forest and potentially profiting directly from deadwood retention as a consequence of implemented retention forestry. The goal of our study was to assess the response of European marten species to deadwood retention in montane mixed forests. Using marten detection rates from camera traps on 135 research plots we assessed the response of martens to deadwood at three different spatial scales using generalized linear mixed models. We found no effect of lying deadwood on marten detections at the plot scale (1 ha) or in a 10 m radius around the camera traps. However, we found a significant increase of marten detections if logs (> 10 cm in diameter) were directly in front and in view of the camera trap. Our results show that deadwood retention as a measure of retention forestry does affect microhabitat use of martens, but not stand selection during the growing season. Logs directly in view of the camera trap increase marten detection rates as martens choose to move and forage along fallen trees when they are available. When using camera trapping to collect data on martens, trap positioning in front of logs can heavily bias trapping results when unaccounted for. Keywords: beech marten, camera trapping, deadwood, logs, pine marten, retention forestry

Biodiversity loss due to intensive timber production is a ubiquitous conservation issue across temperate and boreal forest ecosystems. Retention forestry, the retention of deadwood and old-growth features within production forest, is one management strategy that has been implemented in various countries around the world to conserve a wide range of taxa within managed forests. The success and ecological implications of retention forestry are currently subject to intensive investigation and while some taxa like birds and insects have already been studied frequently, larger mammals have received less attention. Pine martens are one of the few larger mammals in central Europe preferring older forest and potentially profiting directly from deadwood retention as a consequence of implemented retention forestry. The goal of our study was to assess the response of European marten species to deadwood retention in montane mixed forests. Using marten detection rates from camera traps on 135 research plots we assessed the response of martens to deadwood at three different spatial scales using generalized linear mixed models. We found no effect of lying deadwood on marten detections at the plot scale (1 ha) or in a 10 m radius around the camera traps. However, we found a significant increase of marten detections if logs (> 10 cm in diameter) were directly in front and in view of the camera trap. Our results show that deadwood retention as a measure of retention forestry does affect microhabitat use of martens, but not stand selection during the growing season. Logs directly in view of the camera trap increase marten detection rates as martens choose to move and forage along fallen trees when they are available. When using camera trapping to collect data on martens, trap positioning in front of logs can heavily bias trapping results when unaccounted for.

We present, on behalf of EuroGentest and the European Society of Human Genetics, guidelines for the evaluation and validation of next-generation sequencing (NGS) applications for the diagnosis of genetic disorders. The work was performed by a group of laboratory geneticists and bioinformaticians, and discussed with clinical geneticists, industry and patients’ representatives, and other stakeholders in the field of human genetics. The statements that were written during the elaboration of the guidelines are presented here. The background document and full guidelines are available as supplementary material. They include many examples to assist the laboratories in the implementation of NGS and accreditation of this service. The work and ideas presented by others in guidelines that have emerged elsewhere in the course of the past few years were also considered and are acknowledged in the full text. Interestingly, a few new insights that have not been cited before have emerged during the preparation of the guidelines. The most important new feature is the presentation of a ‘rating system’ for NGS-based diagnostic tests. The guidelines and statements have been applauded by the genetic diagnostic community, and thus seem to be valuable for the harmonization and quality assurance of NGS diagnostics in Europe.

Lichtheimia species are the second most important cause of mucormycosis in Europe. To provide broader insights into the molecular basis of the pathogenicity-associated traits of the basal Mucorales, we report the full genome sequence of L. corymbifera and compared it to the genome of Rhizopus oryzae, the most common cause of mucormycosis worldwide. The genome assembly encompasses 33.6 MB and 12,379 protein-coding genes. This study reveals four major differences of the L. corymbifera genome to R. oryzae: (i) the presence of an highly elevated number of gene duplications which are unlike R. oryzae not due to whole genome duplication (WGD), (ii) despite the relatively high incidence of introns, alternative splicing (AS) is not frequently observed for the generation of paralogs and in response to stress, (iii) the content of repetitive elements is strikingly low (<5%), (iv) L. corymbifera is typically haploid. Novel virulence factors were identified which may be involved in the regulation of the adaptation to iron-limitation, e.g. LCor01340.1 encoding a putative siderophore transporter and LCor00410.1 involved in the siderophore metabolism. Genes encoding the transcription factors LCor08192.1 and LCor01236.1, which are similar to GATA type regulators and to calcineurin regulated CRZ1, respectively, indicating an involvement of the calcineurin pathway in the adaption to iron limitation. Genes encoding MADS-box transcription factors are elevated up to 11 copies compared to the 1-4 copies usually found in other fungi. More findings are: (i) lower content of tRNAs, but unique codons in L. corymbifera, (ii) Over 25% of the proteins are apparently specific for L. corymbifera. (iii) L. corymbifera contains only 2/3 of the proteases (known to be essential virulence factors) in comparison to R. oryzae. On the other hand, the number of secreted proteases, however, is roughly twice as high as in R. oryzae.

Deer are the most abundant large herbivores in temperate and boreal forests across the Northern Hemisphere. They are ecosystem engineers known to alter understory vegetation and future tree species composition by selective browsing. Also, deer have strong impacts on faunistic groups, often mediated by vegetation. The ongoing loss of faunal biodiversity in forests worldwide can be exacerbated by high deer population densities. Adapted deer management for the purpose of forest biodiversity conservation requires a holistic understanding of deer–fauna relationships. In this systematic map, we examine the existing literature assessing the effects of deer on faunal communities in boreal and temperate forests. Our aim is to synthesize currently described trends and identify research gaps for our understanding of deer as biotic drivers of forest communities. We reviewed 64 studies on how the abundance, species richness, or diversity of faunal taxa responded to different levels of deer abundance or density in forest ecosystems across the Northern Hemisphere. In total, we found almost 400 individual reported effects of nine native deer species on forest‐dwelling faunal communities. However, our systematic map reveals that comprehensive synthesis of the current literature remains a challenge. Published studies often do not report contextual data essential for comparison and meta‐analysis, for example, deer density, forest management, and predation pressure. Moreover, the methodological approaches of the included studies often only account for potential linear effects of deer on fauna, likely oversimplifying the complexity of direct and indirect effects that deer can have on their ecosystem. We recommend that multi‐level enclosure experiments be applied to assess the impact on faunal taxa. This approach combines robust causal inference with the potential straightforward comparison and replication between deer species, forest types, and system productivity, which will facilitate the utilization of the results in future research and management. Deer are key drivers of faunal communities in temperate and boreal forest ecosystems. In this systematic map, we review the current literature assessing the effects of native deer on abundance, species richness, and diversity of forest‐dwelling faunal taxa. While many aspects of deer–faunal relationships are already studied, proper meta‐analysis requires better reporting of contextual data such as deer density and the assessment of potential non‐linear effects of deer on faunal taxa.