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6 result(s) for "Semyung Jung"
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Identification of Hit Compounds Using Artificial Intelligence for the Management of Allergic Diseases
This study aimed to identify and evaluate drug candidates targeting the kinase inhibitory region of suppressor of cytokine signaling (SOCS) 3 for the treatment of allergic rhinitis (AR). Utilizing an artificial intelligence (AI)-based new drug development platform, virtual screening was conducted to identify compounds inhibiting the SH2 domain binding of SOCS3. Luminescence assays assessed the ability of these compounds to restore JAK-2 activity diminished by SOCS3. Jurkat T and BEAS-2B cells were utilized to investigate changes in SOCS3 and STAT3 expression, along with STAT3 phosphorylation in response to the identified compounds. In an OVA-induced allergic rhinitis mouse model, we measured serum levels of total IgE and OVA-specific IgE, performed real-time PCR on nasal mucosa samples to quantify Th2 cytokines and IFN-γ expression, and conducted immunohistochemistry to analyze eosinophil levels. Screening identified 20 hit compounds with robust binding affinities. As the concentration of SOCS3 increased, a corresponding decrease in JAK2 activity was observed. Compounds 5 and 8 exhibited significant efficacy in restoring JAK2 activity without toxicity. Treatment with these compounds resulted in reduced SOCS3 expression and the reinstatement of STAT3 phosphorylation in Jurkat T and BEAS-2B cells. In the OVA-induced allergic rhinitis mouse model, compounds 5 and 8 effectively alleviated nasal symptoms and demonstrated lower levels of immune markers compared to the allergy group. This study underscores the promising nonclinical efficacy of compounds identified through the AI-based drug development platform. These findings introduce innovative strategies for the treatment of AR and highlight the potential therapeutic value of targeting SOCS3 in managing AR.
Multiplex Assay for Rapid Detection and Analysis of Nucleic Acid Using Barcode Receptor Encoded Particle (BREP)
Several multiplex nucleic acid assay platforms have been developed in response to the increasing importance of nucleic acid analysis, but these assays should be optimized as per the requirements of point-of-care for clinical diagnosis. To achieve rapid and accurate detection, involving a simple procedure, we propose a new concept in the field of nucleic acid multiplex assay platforms using hydrogel microparticles, called barcode receptor-encoded particles (BREPs). The BREP assay detects multiple targets in a single reaction with a single fluorophore by analyzing graphically encoded hydrogel particles. By introducing sets of artificially synthesized barcode receptor and barcode probes, the BREP assay is easily applicable in multiplexing any genetic target; sets of barcode receptors and barcode probes should be designed delicately for universal application. The performance of the BREP assay was successfully verified in a multiplex assay for the identification of different malaria species with high sensitivity, wide dynamic range, fast detection time, and multiplexibility.
Sirtuin 7 Inhibitor Attenuates Colonic Mucosal Immune Activation in Mice—Potential Therapeutic Target in Inflammatory Bowel Disease
Accumulating evidence has shown that sirtuin 7 (SIRT7), a mediator of various cellular activities, plays an important role in the pathogenesis of various immune-mediated inflammatory disorders. However, information remains limited regarding the role of SIRT7 in intestinal inflammation. We used a murine colitis model to investigate the role of SIRT7 in intestinal immunity and whether SIRT7 inhibitors could attenuate the intestinal inflammatory response. Mice were divided into three groups: control, colitis-induced, and SIRT7-inhibitor-treated. A colitis mouse model was established by intraperitoneal injection and nasal challenge with ovalbumin, as in our previous study. Quantitative analyses of inflammatory cytokines and SIRT7 levels in the colonic mucosa were performed to compare the changes in inflammatory responses between the three groups. The colitis group showed increased levels of inflammatory cytokines and SIRT7 in the colonic mucosa. The inflammatory reaction was suppressed in colitis-induced mice administered the SIRT7 inhibitor. The qRT-PCR results showed normalization of inflammatory cytokines in the SIRT7 inhibitor-treated group. Histologic study revealed a decrease in the extent of inflammation after SIRT7 treatment. We also observed that the degree of clinical inflammation was improved in SIRT7-treated mice. Our study demonstrated that SIRT7 inhibition attenuated the inflammatory response in the colon of mice, suggesting a possible role for SIRT7 in the pathogenesis of immune-mediated intestinal inflammation.
Derivation and Validation of Bandgap Equation Using Serpentine Resonator
Bandgap refers to a frequency band where free waves do not propagate. One of the characteristics of a bandgap is its ability to block the propagation of bending waves in a specific frequency band with a periodic structure. Additionally, it has been reported in previous studies that the vibration-reduction performance of a bandgap is superior to that of other reduction methods. A bandgap can be generated in various frequency bands through a simple parameter change in the unit structure. However, the bandgap for a desired frequency band can be determined accurately only with intensive simulations. To overcome this limitation, we have mathematically derived the bandgap using a serpentine spring as a unit structure. The bandgap equation is derived from the general mass–spring system and the final bandgap is derived by substituting the system into the serpentine resonator. The error map for the major design parameter is confirmed by comparing the derived bandgap with the simulation result. In addition, the theoretical bandgap is compared to the experiment value and the vibration-reduction performance of the serpentine resonator is also confirmed. Based on the theoretical and experimental result, the proposed serpentine resonator verifies that the bandgap can be derived mathematically without numerical analysis. Therefore, serpentine resonator is expected to have various applications since it dramatically reduces the time and cost for forming the bandgap of the desired frequency band.
Empirical Comparison of Supervised Learning Methods for Assessing the Stability of Slopes Adjacent to Military Operation Roads
The Civilian Access Control Zone (CACZ), south of the Demilitarized Zone (DMZ) separating North and South Korea, has functioned as a unique bio-reserve owing to restrictions on human use. However, it is now increasingly threatened by damaged land and slope failures. In this study, a machine-learning-based method was used to assess slope stability by introducing the random forest (RF), support vector machine (SVM), extreme gradient boosting (XGBoost), and logistic regression (LR) approaches. These classification models were trained and evaluated on 393 slope stability cases from 2009 to 2019 to assess slope stability in the northern area of the Civilian Control Line, South Korea. For comparison, the performance of these classification models was measured by considering the accuracy, Cohen’s kappa, F1-score, recall rate, precision, and area under the ROC curve (AUC). Furthermore, 14 influencing factors (slope, vegetation, structure conditions, etc.) were considered to explore feature importance. The evaluation and comparison of the results showed that the performance of all classifier models was satisfactory for assessing the stability of the slope, the ability of LR was validated (accuracy = 0.847; AUC = 0.838), and XGBoost proved to be the most efficient method for predicting slope stability (accuracy = 0.903; AUC = 0.900). Among the 14 influencing factors, the external condition was the most important. The proposed supervised learning method offers a promising method for assessing slope status, may be beneficial for government agencies in early-stage risk mitigation, and provides a database for efficient restoration management.
Acoustic imaging by three-dimensional acoustic Luneburg meta-lens with lattice columns
A three-dimensional acoustic Luneburg meta-lens has the advantage of refracting sound waves for all incident angles and focusing higher sound pressure compared to a two-dimensional lens. The lens made of plastic with a diameter of 120 mm was designed with thousands of lattice column-shaped meta-atoms to maintain its three-dimensional shape. The lens's three-dimensional focusing performance and acoustic imaging were simulated and measured at the frequency range of 5 kHz ~ 20 kHz. The omnidirectional property was confirmed by rotating the lens to change the incident angle and measuring the sound pressure. The development of these spherical Luneburg meta-lenses is expected to improve the performance of devices that require acoustic focusing.